RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 GCSHP23434 173 aa8.34□□□□□ -1.07
COL18A1-206ENST00000459895 RAB5BP61020 215 aa8.34□□□□□ -1.07
COL18A1-206ENST00000459895 LINC00242Q5T6M2 205 aa8.34□□□□□ -1.07
COL18A1-206ENST00000459895 CHCHD1Q96BP2 118 aaKnown RBP8.34□□□□□ -1.07
COL18A1-206ENST00000459895 IGHV1-58A0A0C4DH39 117 aa8.33□□□□□ -1.08
COL18A1-206ENST00000459895 LINC01549A6NIU2 74 aa8.33□□□□□ -1.08
COL18A1-206ENST00000459895 SERF1AO75920 110 aa8.33□□□□□ -1.08
COL18A1-206ENST00000459895 PDZD11Q5EBL8 140 aa8.33□□□□□ -1.08
COL18A1-206ENST00000459895 C5orf38Q86SI9 138 aa8.33□□□□□ -1.08
COL18A1-206ENST00000459895 BAGE3Q86Y29 109 aa8.33□□□□□ -1.08
COL18A1-206ENST00000459895 VCX2Q9H322 139 aa8.33□□□□□ -1.08
COL18A1-206ENST00000459895 IGHV3OR16-9A0A0B4J2B5 98 aa8.32□□□□□ -1.08
COL18A1-206ENST00000459895 MALP21145 153 aa8.32□□□□□ -1.08
COL18A1-206ENST00000459895 CNBPP62633 177 aaKnown RBP8.32□□□□□ -1.08
COL18A1-206ENST00000459895 COX6A2Q02221 97 aa8.32□□□□□ -1.08
COL18A1-206ENST00000459895 PAPPA-AS1Q5QFB9 102 aa8.32□□□□□ -1.08
COL18A1-206ENST00000459895 LINC00526Q96FQ7 95 aa8.32□□□□□ -1.08
COL18A1-206ENST00000459895 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.31□□□□□ -1.08
COL18A1-206ENST00000459895 HSBP1O75506 76 aa8.31□□□□□ -1.08
COL18A1-206ENST00000459895 SLPIP03973 132 aa8.31□□□□□ -1.08
COL18A1-206ENST00000459895 HAMPP81172 84 aa8.31□□□□□ -1.08
COL18A1-206ENST00000459895 CFAP161Q6P656 301 aa8.31□□□□□ -1.08
COL18A1-206ENST00000459895 FAM19A3Q7Z5A8 133 aa8.31□□□□□ -1.08
COL18A1-206ENST00000459895 A0A0J9YXV3 536 aa8.3□□□□□ -1.08
COL18A1-206ENST00000459895 HIST1H2BKO60814 126 aa8.3□□□□□ -1.08
COL18A1-206ENST00000459895 HIST1H2BJP06899 126 aa8.3□□□□□ -1.08
COL18A1-206ENST00000459895 HIST1H2BOP23527 126 aa8.3□□□□□ -1.08
COL18A1-206ENST00000459895 HIST1H2BBP33778 126 aa8.3□□□□□ -1.08
COL18A1-206ENST00000459895 HIST1H2BDP58876 126 aa8.3□□□□□ -1.08
COL18A1-206ENST00000459895 HIST1H2BCP62807 126 aa8.3□□□□□ -1.08
COL18A1-206ENST00000459895 SPAG11BQ08648 103 aa8.3□□□□□ -1.08
COL18A1-206ENST00000459895 HIST2H2BEQ16778 126 aa8.3□□□□□ -1.08
COL18A1-206ENST00000459895 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.3□□□□□ -1.08
COL18A1-206ENST00000459895 FAM19A2Q8N3H0 131 aa8.3□□□□□ -1.08
COL18A1-206ENST00000459895 HIST1H2BHQ93079 126 aa8.3□□□□□ -1.08
COL18A1-206ENST00000459895 HIST1H2BNQ99877 126 aa8.3□□□□□ -1.08
COL18A1-206ENST00000459895 HIST1H2BMQ99879 126 aa8.3□□□□□ -1.08
COL18A1-206ENST00000459895 A0A087WZ39 114 aa8.29□□□□□ -1.08
COL18A1-206ENST00000459895 CDK2AP2O75956 126 aa8.29□□□□□ -1.08
COL18A1-206ENST00000459895 PMVKQ15126 192 aa8.29□□□□□ -1.08
COL18A1-206ENST00000459895 ORAOV1Q8WV07 137 aa8.29□□□□□ -1.08
COL18A1-206ENST00000459895 CST9LQ9H4G1 147 aa8.29□□□□□ -1.08
COL18A1-206ENST00000459895 IGLV4-69A0A075B6H9 119 aa8.28□□□□□ -1.08
COL18A1-206ENST00000459895 IGHV3-64A0A075B6Q5 118 aa8.28□□□□□ -1.08
COL18A1-206ENST00000459895 Q6ZSA8 131 aa8.28□□□□□ -1.08
COL18A1-206ENST00000459895 OR10D4PQ8NGN7 298 aa8.28□□□□□ -1.08
COL18A1-206ENST00000459895 FAM30AQ9NZY2 134 aa8.28□□□□□ -1.08
COL18A1-206ENST00000459895 NUPR1O60356 82 aa8.27□□□□□ -1.09
COL18A1-206ENST00000459895 ATP5LO75964 103 aa8.27□□□□□ -1.09
COL18A1-206ENST00000459895 APOMO95445 188 aa8.27□□□□□ -1.09
COL18A1-206ENST00000459895 HERVK_113P63121 156 aa8.27□□□□□ -1.09
COL18A1-206ENST00000459895 C9orf163Q8N9P6 203 aa8.27□□□□□ -1.09
COL18A1-206ENST00000459895 CARD19Q96LW7 228 aa8.27□□□□□ -1.09
COL18A1-206ENST00000459895 CHAC1Q9BUX1 264 aa8.27□□□□□ -1.09
COL18A1-206ENST00000459895 CDKN2A-AS1Q9UH64 79 aa8.27□□□□□ -1.09
COL18A1-206ENST00000459895 IGLV5-45A0A087WSX0 123 aa8.26□□□□□ -1.09
COL18A1-206ENST00000459895 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.26□□□□□ -1.09
COL18A1-206ENST00000459895 TINCRA0A1B0GVN0 87 aa8.26□□□□□ -1.09
COL18A1-206ENST00000459895 ZNF561-AS1K7EIQ3 104 aa8.26□□□□□ -1.09
COL18A1-206ENST00000459895 NDUFA6P56556 154 aa8.26□□□□□ -1.09
COL18A1-206ENST00000459895 LINC00469Q8N7U9 141 aa8.26□□□□□ -1.09
COL18A1-206ENST00000459895 GEMIN7Q9H840 131 aaKnown RBP8.26□□□□□ -1.09
COL18A1-206ENST00000459895 IGLC3P0DOY3 106 aa8.25□□□□□ -1.09
COL18A1-206ENST00000459895 SEC11AP67812 179 aa8.25□□□□□ -1.09
COL18A1-206ENST00000459895 Q6ZRU5 148 aa8.25□□□□□ -1.09
COL18A1-206ENST00000459895 IFI27L1Q96BM0 104 aa8.25□□□□□ -1.09
COL18A1-206ENST00000459895 SMIM1B2RUZ4 78 aa8.24□□□□□ -1.09
COL18A1-206ENST00000459895 PANO1I0J062 215 aa8.24□□□□□ -1.09
COL18A1-206ENST00000459895 XGP55808 180 aa8.24□□□□□ -1.09
COL18A1-206ENST00000459895 SYCNQ0VAF6 134 aa8.24□□□□□ -1.09
COL18A1-206ENST00000459895 CAMK2N2Q96S95 79 aa8.24□□□□□ -1.09
COL18A1-206ENST00000459895 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.24□□□□□ -1.09
COL18A1-206ENST00000459895 C11orf86A6NJI1 115 aa8.23□□□□□ -1.09
COL18A1-206ENST00000459895 CHTF8P0CG12 524 aa8.23□□□□□ -1.09
COL18A1-206ENST00000459895 KIAA0087Q14695 138 aa8.23□□□□□ -1.09
COL18A1-206ENST00000459895 SCXQ7RTU7 201 aa8.23□□□□□ -1.09
COL18A1-206ENST00000459895 LINC01561Q8N1V8 128 aa8.23□□□□□ -1.09
COL18A1-206ENST00000459895 C2orf48Q96LS8 159 aa8.23□□□□□ -1.09
COL18A1-206ENST00000459895 KRTAP17-1Q9BYP8 105 aa8.23□□□□□ -1.09
COL18A1-206ENST00000459895 H0Y8G0 127 aa8.22□□□□□ -1.09
COL18A1-206ENST00000459895 LEPROTL1O95214 131 aa8.22□□□□□ -1.09
COL18A1-206ENST00000459895 SPINK8P0C7L1 97 aa8.22□□□□□ -1.09
COL18A1-206ENST00000459895 ZNF22P17026 224 aaPredicted RBP8.22□□□□□ -1.09
COL18A1-206ENST00000459895 SDIM1Q6ZPB5 146 aa8.22□□□□□ -1.09
COL18A1-206ENST00000459895 PACRGQ96M98 296 aaPredicted RBP8.22□□□□□ -1.09
COL18A1-206ENST00000459895 A0A096LNI7 61 aa8.21□□□□□ -1.1
COL18A1-206ENST00000459895 TRAV12-1A0A0B4J245 112 aa8.21□□□□□ -1.1
COL18A1-206ENST00000459895 C10orf25Q5T742 122 aa8.21□□□□□ -1.1
COL18A1-206ENST00000459895 TOMM7Q9P0U1 55 aa8.21□□□□□ -1.1
COL18A1-206ENST00000459895 CHTOPQ9Y3Y2 248 aaKnown RBP8.21□□□□□ -1.1
COL18A1-206ENST00000459895 NDUFA1O15239 70 aa8.2□□□□□ -1.1
COL18A1-206ENST00000459895 FABP4P15090 132 aa8.2□□□□□ -1.1
COL18A1-206ENST00000459895 C2orf82Q6UX34 121 aa8.2□□□□□ -1.1
COL18A1-206ENST00000459895 Q8IZM0 81 aa8.2□□□□□ -1.1
COL18A1-206ENST00000459895 SPACA4Q8TDM5 124 aa8.2□□□□□ -1.1
COL18A1-206ENST00000459895 MRPL35Q9NZE8 188 aaKnown RBP8.2□□□□□ -1.1
COL18A1-206ENST00000459895 C6orf48Q9UBA6 75 aa8.2□□□□□ -1.1
COL18A1-206ENST00000459895 IGKV2-24A0A0C4DH68 120 aa8.19□□□□□ -1.1
COL18A1-206ENST00000459895 F8VRH5 84 aa8.19□□□□□ -1.1
COL18A1-206ENST00000459895 CIRBPQ14011 172 aaKnown RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms