RNA–Protein interactions for RNA: ENST00000458277.1

HMGB4-202, Transcript of high mobility group box 4, humanhuman

TSL 3

Gene HMGB4, Length 437 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-202ENST00000458277 C1orf64Q8NEQ6 169 aa3.93□□□□□ -1.78
HMGB4-202ENST00000458277 WFDC9Q8NEX5 89 aa3.93□□□□□ -1.78
HMGB4-202ENST00000458277 ZFHX2Q9C0A1 2572 aaPredicted RBP3.93□□□□□ -1.78
HMGB4-202ENST00000458277 FER1L5A0AVI2 2057 aa3.93□□□□□ -1.78
HMGB4-202ENST00000458277 PIEZO1Q92508 2521 aa3.92□□□□□ -1.78
HMGB4-202ENST00000458277 EP300Q09472 2414 aaPredicted RBP3.92□□□□□ -1.78
HMGB4-202ENST00000458277 GVINP1Q7Z2Y8 2422 aa3.92□□□□□ -1.78
HMGB4-202ENST00000458277 INTS1Q8N201 2190 aaKnown RBP3.92□□□□□ -1.78
HMGB4-202ENST00000458277 MED12Q93074 2177 aa3.92□□□□□ -1.78
HMGB4-202ENST00000458277 DCHS1Q96JQ0 3298 aa3.92□□□□□ -1.78
HMGB4-202ENST00000458277 LY6G6EA0A0G2JKS1 128 aa3.92□□□□□ -1.78
HMGB4-202ENST00000458277 TRBV10-1A0A0K0K1A3 114 aa3.92□□□□□ -1.78
HMGB4-202ENST00000458277 LCE6AA0A183 80 aa3.92□□□□□ -1.78
HMGB4-202ENST00000458277 CYSRT1A8MQ03 144 aa3.92□□□□□ -1.78
HMGB4-202ENST00000458277 C19orf84I3L1E1 186 aa3.92□□□□□ -1.78
HMGB4-202ENST00000458277 RNASE3P12724 160 aaKnown RBP3.92□□□□□ -1.78
HMGB4-202ENST00000458277 ZFP36P26651 326 aaKnown RBP3.92□□□□□ -1.78
HMGB4-202ENST00000458277 KLK9Q2XQG4 91 aa3.92□□□□□ -1.78
HMGB4-202ENST00000458277 LINC01554Q52M75 96 aa3.92□□□□□ -1.78
HMGB4-202ENST00000458277 NTM-AS1Q6ZSK4 140 aa3.92□□□□□ -1.78
HMGB4-202ENST00000458277 ZFAND2AQ8N6M9 145 aa3.92□□□□□ -1.78
HMGB4-202ENST00000458277 Q8NA96 180 aa3.92□□□□□ -1.78
HMGB4-202ENST00000458277 SPTSSBQ8NFR3 76 aa3.92□□□□□ -1.78
HMGB4-202ENST00000458277 NPBQ8NG41 125 aa3.92□□□□□ -1.78
HMGB4-202ENST00000458277 MUC7Q8TAX7 377 aa3.92□□□□□ -1.78
HMGB4-202ENST00000458277 OCR1Q9BZK8 76 aa3.92□□□□□ -1.78
HMGB4-202ENST00000458277 KLK9Q9UKQ9 250 aa3.92□□□□□ -1.78
HMGB4-202ENST00000458277 U3KQA8 63 aa3.92□□□□□ -1.78
HMGB4-202ENST00000458277 DOCK7Q96N67 2140 aa3.92□□□□□ -1.78
HMGB4-202ENST00000458277 ESPL1Q14674 2120 aa3.91□□□□□ -1.78
HMGB4-202ENST00000458277 LOC101927531A0A1B0GV80 90 aa3.91□□□□□ -1.78
HMGB4-202ENST00000458277 A6NED7 52 aa3.91□□□□□ -1.78
HMGB4-202ENST00000458277 C16orf90A8MZG2 172 aa3.91□□□□□ -1.78
HMGB4-202ENST00000458277 PRAC2D3DTV9 90 aa3.91□□□□□ -1.78
HMGB4-202ENST00000458277 H3BPC8 53 aa3.91□□□□□ -1.78
HMGB4-202ENST00000458277 IGLV1-44P01699 117 aa3.91□□□□□ -1.78
HMGB4-202ENST00000458277 DEFB133Q30KQ1 61 aa3.91□□□□□ -1.78
HMGB4-202ENST00000458277 C9orf116Q5BN46 136 aaPredicted RBP3.91□□□□□ -1.78
HMGB4-202ENST00000458277 Q5VV11 94 aa3.91□□□□□ -1.78
HMGB4-202ENST00000458277 SPANXA2-OT1Q8N9U9 137 aa3.91□□□□□ -1.78
HMGB4-202ENST00000458277 Q9BRP9 147 aa3.91□□□□□ -1.78
HMGB4-202ENST00000458277 RIF1Q5UIP0 2472 aaKnown RBP3.9□□□□□ -1.78
HMGB4-202ENST00000458277 IGHV3-64DA0A0J9YX35 117 aa3.9□□□□□ -1.79
HMGB4-202ENST00000458277 TRBV6-4A0A1B0GX49 114 aa3.9□□□□□ -1.79
HMGB4-202ENST00000458277 KRTAP5-9P26371 169 aa3.9□□□□□ -1.79
HMGB4-202ENST00000458277 CASC2Q6XLA1 102 aa3.9□□□□□ -1.79
HMGB4-202ENST00000458277 ITLN2Q8WWU7 325 aaPredicted RBP3.9□□□□□ -1.79
HMGB4-202ENST00000458277 ARRDC1-AS1Q9H2J1 176 aa3.9□□□□□ -1.79
HMGB4-202ENST00000458277 CDKN2A-AS1Q9UH64 79 aa3.9□□□□□ -1.79
HMGB4-202ENST00000458277 CELA1Q9UNI1 258 aa3.9□□□□□ -1.79
HMGB4-202ENST00000458277 DIDO1Q9BTC0 2240 aaKnown RBP3.89□□□□□ -1.79
HMGB4-202ENST00000458277 TFF1P04155 84 aa3.89□□□□□ -1.79
HMGB4-202ENST00000458277 IGHV1-8P0DP01 117 aa3.89□□□□□ -1.79
HMGB4-202ENST00000458277 IGHV4-38-2P0DP08 117 aa3.89□□□□□ -1.79
HMGB4-202ENST00000458277 LINC00337Q8N6G1 96 aa3.89□□□□□ -1.79
HMGB4-202ENST00000458277 KAAG1Q9UBP8 84 aa3.89□□□□□ -1.79
HMGB4-202ENST00000458277 CACNA1AO00555 2505 aa3.89□□□□□ -1.79
HMGB4-202ENST00000458277 KNTC1P50748 2209 aa3.89□□□□□ -1.79
HMGB4-202ENST00000458277 CACNA1DQ01668 2161 aa3.88□□□□□ -1.79
HMGB4-202ENST00000458277 IGLV3-9A0A075B6K5 115 aa3.88□□□□□ -1.79
HMGB4-202ENST00000458277 IGHV3OR16-9A0A0B4J2B5 98 aa3.88□□□□□ -1.79
HMGB4-202ENST00000458277 KLLNB2CW77 178 aa3.88□□□□□ -1.79
HMGB4-202ENST00000458277 SMIM1B2RUZ4 78 aa3.88□□□□□ -1.79
HMGB4-202ENST00000458277 C3orf84H3BNL1 204 aa3.88□□□□□ -1.79
HMGB4-202ENST00000458277 K7EQD1 137 aa3.88□□□□□ -1.79
HMGB4-202ENST00000458277 IGHV4-31P0DP07 118 aa3.88□□□□□ -1.79
HMGB4-202ENST00000458277 IGHV1-2P23083 117 aa3.88□□□□□ -1.79
HMGB4-202ENST00000458277 LINC00158P58513 81 aa3.88□□□□□ -1.79
HMGB4-202ENST00000458277 C9orf129Q5T035 196 aaKnown RBP3.88□□□□□ -1.79
HMGB4-202ENST00000458277 KRTAP5-4Q6L8H1 288 aa3.88□□□□□ -1.79
HMGB4-202ENST00000458277 C11orf72Q8NBR9 251 aa3.88□□□□□ -1.79
HMGB4-202ENST00000458277 CDC42SE2Q9NRR3 84 aa3.88□□□□□ -1.79
HMGB4-202ENST00000458277 ZNF580Q9UK33 172 aa3.88□□□□□ -1.79
HMGB4-202ENST00000458277 ZNF407Q9C0G0 2248 aa3.88□□□□□ -1.79
HMGB4-202ENST00000458277 POLEQ07864 2286 aa3.88□□□□□ -1.79
HMGB4-202ENST00000458277 DNAH14Q0VDD8 3507 aa3.88□□□□□ -1.79
HMGB4-202ENST00000458277 FAM186AA6NE01 2351 aa3.88□□□□□ -1.79
HMGB4-202ENST00000458277 PRRC2AP48634 2157 aaKnown RBP3.87□□□□□ -1.79
HMGB4-202ENST00000458277 IGKV2-28A0A075B6P5 120 aa3.87□□□□□ -1.79
HMGB4-202ENST00000458277 IGHV3-38A0A0C4DH36 116 aa3.87□□□□□ -1.79
HMGB4-202ENST00000458277 PCNX2A6NKB5 2137 aa3.87□□□□□ -1.79
HMGB4-202ENST00000458277 H0Y9J4 135 aa3.87□□□□□ -1.79
HMGB4-202ENST00000458277 IGKV2D-28P01615 120 aa3.87□□□□□ -1.79
HMGB4-202ENST00000458277 IGLV1-47P01700 117 aa3.87□□□□□ -1.79
HMGB4-202ENST00000458277 B9D2Q9BPU9 175 aa3.87□□□□□ -1.79
HMGB4-202ENST00000458277 HIGD2AQ9BW72 106 aa3.87□□□□□ -1.79
HMGB4-202ENST00000458277 KRTAP4-4Q9BYR3 166 aa3.87□□□□□ -1.79
HMGB4-202ENST00000458277 CEP250Q9BV73 2442 aa3.87□□□□□ -1.79
HMGB4-202ENST00000458277 ASXL3Q9C0F0 2248 aa3.87□□□□□ -1.79
HMGB4-202ENST00000458277 PI4KAP42356 2102 aa3.86□□□□□ -1.79
HMGB4-202ENST00000458277 PTPRZ1P23471 2315 aaPredicted RBP3.86□□□□□ -1.79
HMGB4-202ENST00000458277 IGHV3-49A0A0A0MS15 119 aa3.86□□□□□ -1.79
HMGB4-202ENST00000458277 IGHV3-16A0A0C4DH30 117 aa3.86□□□□□ -1.79
HMGB4-202ENST00000458277 ETDCA0A1B0GVM5 59 aa3.86□□□□□ -1.79
HMGB4-202ENST00000458277 K7EQG2 157 aa3.86□□□□□ -1.79
HMGB4-202ENST00000458277 COX7BP24311 80 aa3.86□□□□□ -1.79
HMGB4-202ENST00000458277 IGFL3Q6UXB1 125 aa3.86□□□□□ -1.79
HMGB4-202ENST00000458277 SCXQ7RTU7 201 aa3.86□□□□□ -1.79
HMGB4-202ENST00000458277 COX7B2Q8TF08 81 aa3.86□□□□□ -1.79
HMGB4-202ENST00000458277 ZCCHC13Q8WW36 166 aaKnown RBP3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms