RNA–Protein interactions for RNA: ENST00000457312.1

SF3B4-202, Transcript of splicing factor 3b subunit 4, humanhuman

TSL 5

Gene SF3B4, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-202ENST00000457312 LYZL1Q6UWQ5 148 aa8.56□□□□□ -1.04
SF3B4-202ENST00000457312 KRTAP9-3Q9BYQ3 159 aa8.56□□□□□ -1.04
SF3B4-202ENST00000457312 F2Z2F3 143 aa8.55□□□□□ -1.04
SF3B4-202ENST00000457312 SERF2P84101 59 aa8.55□□□□□ -1.04
SF3B4-202ENST00000457312 TNFSF18Q9UNG2 199 aa8.55□□□□□ -1.04
SF3B4-202ENST00000457312 TRBV6-5A0A0K0K1A5 114 aa8.54□□□□□ -1.04
SF3B4-202ENST00000457312 CTXND1A0A1B0GTU2 59 aa8.54□□□□□ -1.04
SF3B4-202ENST00000457312 S100A5P33763 92 aa8.54□□□□□ -1.04
SF3B4-202ENST00000457312 FHITP49789 147 aa8.54□□□□□ -1.04
SF3B4-202ENST00000457312 MPC2O95563 127 aa8.53□□□□□ -1.04
SF3B4-202ENST00000457312 RPS20P60866 119 aaKnown RBP8.53□□□□□ -1.04
SF3B4-202ENST00000457312 RPS29P62273 56 aaKnown RBP8.53□□□□□ -1.04
SF3B4-202ENST00000457312 PLA2G10O15496 165 aa8.52□□□□□ -1.05
SF3B4-202ENST00000457312 SLC25A20O43772 301 aa8.52□□□□□ -1.05
SF3B4-202ENST00000457312 S100A9P06702 114 aaKnown RBP8.52□□□□□ -1.05
SF3B4-202ENST00000457312 CST9LP1Q5W188 147 aa8.52□□□□□ -1.05
SF3B4-202ENST00000457312 LYRM1O43325 122 aa8.51□□□□□ -1.05
SF3B4-202ENST00000457312 MT1FP04733 61 aa8.51□□□□□ -1.05
SF3B4-202ENST00000457312 H2AFB2P0C5Z0 115 aa8.51□□□□□ -1.05
SF3B4-202ENST00000457312 FAM210AQ96ND0 272 aa8.51□□□□□ -1.05
SF3B4-202ENST00000457312 SCO2A0A1W2PP80 73 aa8.5□□□□□ -1.05
SF3B4-202ENST00000457312 PET100P0DJ07 73 aa8.5□□□□□ -1.05
SF3B4-202ENST00000457312 IL7P13232 177 aa8.5□□□□□ -1.05
SF3B4-202ENST00000457312 H2BFSP57053 126 aa8.5□□□□□ -1.05
SF3B4-202ENST00000457312 TWIST1Q15672 202 aa8.5□□□□□ -1.05
SF3B4-202ENST00000457312 TEX261Q6UWH6 196 aa8.5□□□□□ -1.05
SF3B4-202ENST00000457312 RPL32P62910 135 aaKnown RBP8.49□□□□□ -1.05
SF3B4-202ENST00000457312 SPRR4Q96PI1 79 aa8.49□□□□□ -1.05
SF3B4-202ENST00000457312 CNFNQ9BYD5 112 aa8.49□□□□□ -1.05
SF3B4-202ENST00000457312 RAB19A4D1S5 217 aa8.48□□□□□ -1.05
SF3B4-202ENST00000457312 FAM19A1Q7Z5A9 133 aa8.48□□□□□ -1.05
SF3B4-202ENST00000457312 TRBV27A0A0K0K1C4 114 aa8.47□□□□□ -1.05
SF3B4-202ENST00000457312 C9orf92A6NGG3 77 aa8.47□□□□□ -1.05
SF3B4-202ENST00000457312 POLR2KP53803 58 aaKnown RBP8.47□□□□□ -1.05
SF3B4-202ENST00000457312 CCDC32Q9BV29 185 aa8.47□□□□□ -1.05
SF3B4-202ENST00000457312 ST20Q9HBF5 79 aa8.47□□□□□ -1.05
SF3B4-202ENST00000457312 IGKV2-28A0A075B6P5 120 aa8.46□□□□□ -1.06
SF3B4-202ENST00000457312 IGKV2D-28P01615 120 aa8.46□□□□□ -1.06
SF3B4-202ENST00000457312 SMAGPQ0VAQ4 97 aa8.46□□□□□ -1.06
SF3B4-202ENST00000457312 FAM104AQ969W3 186 aa8.46□□□□□ -1.06
SF3B4-202ENST00000457312 IFNA1P01562 189 aa8.45□□□□□ -1.06
SF3B4-202ENST00000457312 CBLN2Q8IUK8 224 aa8.45□□□□□ -1.06
SF3B4-202ENST00000457312 C9orf62Q8N4C0 152 aa8.45□□□□□ -1.06
SF3B4-202ENST00000457312 IGLV5-37A0A075B6J1 123 aa8.44□□□□□ -1.06
SF3B4-202ENST00000457312 TGIF2-C20orf24A0A0A6YYL0 155 aa8.44□□□□□ -1.06
SF3B4-202ENST00000457312 XKRY2A2RUG3 117 aa8.44□□□□□ -1.06
SF3B4-202ENST00000457312 MAP1LC3B2A6NCE7 125 aa8.44□□□□□ -1.06
SF3B4-202ENST00000457312 Q6Q795 121 aa8.44□□□□□ -1.06
SF3B4-202ENST00000457312 TIMM21Q9BVV7 248 aa8.44□□□□□ -1.06
SF3B4-202ENST00000457312 MAP1LC3BQ9GZQ8 125 aa8.44□□□□□ -1.06
SF3B4-202ENST00000457312 PAGE4O60829 102 aa8.43□□□□□ -1.06
SF3B4-202ENST00000457312 GNB1LQ9BYB4 327 aa8.43□□□□□ -1.06
SF3B4-202ENST00000457312 NOL3O60936 208 aaKnown RBP8.42□□□□□ -1.06
SF3B4-202ENST00000457312 TMEM126AQ9H061 195 aa8.42□□□□□ -1.06
SF3B4-202ENST00000457312 KMT2DO14686 5537 aa8.41□□□□□ -1.06
SF3B4-202ENST00000457312 TMEM238C9JI98 176 aa8.41□□□□□ -1.06
SF3B4-202ENST00000457312 SCO1O75880 301 aa8.41□□□□□ -1.06
SF3B4-202ENST00000457312 FCER1GP30273 86 aa8.41□□□□□ -1.06
SF3B4-202ENST00000457312 HIGD2AQ9BW72 106 aa8.41□□□□□ -1.06
SF3B4-202ENST00000457312 RPL35P42766 123 aaKnown RBP8.4□□□□□ -1.06
SF3B4-202ENST00000457312 IFITM10A6NMD0 228 aa8.39□□□□□ -1.07
SF3B4-202ENST00000457312 NKAPP1Q8N9T2 125 aa8.39□□□□□ -1.07
SF3B4-202ENST00000457312 TMUB2Q71RG4 321 aa8.38□□□□□ -1.07
SF3B4-202ENST00000457312 SMIM15Q7Z3B0 74 aa8.38□□□□□ -1.07
SF3B4-202ENST00000457312 MDN1Q9NU22 5596 aa8.37□□□□□ -1.07
SF3B4-202ENST00000457312 M0R378 163 aa8.36□□□□□ -1.07
SF3B4-202ENST00000457312 CKS1BP61024 79 aa8.36□□□□□ -1.07
SF3B4-202ENST00000457312 HBBP68871 147 aa8.36□□□□□ -1.07
SF3B4-202ENST00000457312 CENPWQ5EE01 88 aa8.36□□□□□ -1.07
SF3B4-202ENST00000457312 ZNF706Q9Y5V0 76 aaPredicted RBP8.36□□□□□ -1.07
SF3B4-202ENST00000457312 KRTAP10-10P60014 251 aa8.35□□□□□ -1.07
SF3B4-202ENST00000457312 RPL39P62891 51 aaKnown RBP8.35□□□□□ -1.07
SF3B4-202ENST00000457312 PFDN1O60925 122 aa8.34□□□□□ -1.07
SF3B4-202ENST00000457312 PRSS2P07478 247 aa8.34□□□□□ -1.07
SF3B4-202ENST00000457312 RPL37P61927 97 aaKnown RBP8.34□□□□□ -1.07
SF3B4-202ENST00000457312 MOBPQ13875 183 aa8.34□□□□□ -1.07
SF3B4-202ENST00000457312 GEMIN7Q9H840 131 aaKnown RBP8.34□□□□□ -1.07
SF3B4-202ENST00000457312 TOMM7Q9P0U1 55 aa8.34□□□□□ -1.07
SF3B4-202ENST00000457312 VCYO14598 125 aa8.33□□□□□ -1.08
SF3B4-202ENST00000457312 AKR1C8PQ5T2L2 129 aa8.33□□□□□ -1.08
SF3B4-202ENST00000457312 TMEM18Q96B42 140 aa8.33□□□□□ -1.08
SF3B4-202ENST00000457312 FAM240BA0A1B0GVZ2 78 aa8.32□□□□□ -1.08
SF3B4-202ENST00000457312 MRPS36P82909 103 aaKnown RBP8.32□□□□□ -1.08
SF3B4-202ENST00000457312 LINC01561Q8N1V8 128 aa8.32□□□□□ -1.08
SF3B4-202ENST00000457312 KRTAP2-3P0C7H8 128 aa8.31□□□□□ -1.08
SF3B4-202ENST00000457312 RPL7L1Q6DKI1 246 aaKnown RBP8.31□□□□□ -1.08
SF3B4-202ENST00000457312 Q8IZM0 81 aa8.31□□□□□ -1.08
SF3B4-202ENST00000457312 KRTAP2-4Q9BYR9 128 aa8.31□□□□□ -1.08
SF3B4-202ENST00000457312 IGLV6-57P01721 117 aa8.3□□□□□ -1.08
SF3B4-202ENST00000457312 SPANXA1Q9NS26 97 aa8.3□□□□□ -1.08
SF3B4-202ENST00000457312 F8VRH5 84 aa8.29□□□□□ -1.08
SF3B4-202ENST00000457312 C6orf226Q5I0X4 101 aa8.29□□□□□ -1.08
SF3B4-202ENST00000457312 IGLV9-49A0A0B4J1Y8 123 aa8.28□□□□□ -1.08
SF3B4-202ENST00000457312 LINC00483Q53H64 154 aa8.28□□□□□ -1.08
SF3B4-202ENST00000457312 LINC01551Q86U37 167 aa8.28□□□□□ -1.08
SF3B4-202ENST00000457312 C11orf52Q96A22 123 aa8.28□□□□□ -1.08
SF3B4-202ENST00000457312 SSBP3-AS1Q7Z2R9 100 aa8.27□□□□□ -1.09
SF3B4-202ENST00000457312 NUDT10Q8NFP7 164 aa8.27□□□□□ -1.09
SF3B4-202ENST00000457312 SMIM12Q96EX1 92 aa8.27□□□□□ -1.09
SF3B4-202ENST00000457312 NUDT11Q96G61 164 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms