RNA–Protein interactions for RNA: ENST00000456713.1

IMP4-206, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 5

Gene IMP4, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-206ENST00000456713 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.56□□□□□ -0.4
IMP4-206ENST00000456713 MALP21145 153 aa12.56□□□□□ -0.4
IMP4-206ENST00000456713 HIGD2BQ4VC39 106 aa12.56□□□□□ -0.4
IMP4-206ENST00000456713 KIAA1109Q2LD37 5005 aa12.55□□□□□ -0.4
IMP4-206ENST00000456713 XGP55808 180 aa12.55□□□□□ -0.4
IMP4-206ENST00000456713 LINC01620Q4KN68 170 aa12.55□□□□□ -0.4
IMP4-206ENST00000456713 ZC2HC1BQ5TFG8 222 aa12.55□□□□□ -0.4
IMP4-206ENST00000456713 C5orf38Q86SI9 138 aa12.55□□□□□ -0.4
IMP4-206ENST00000456713 APOBP04114 4563 aaKnown RBP12.54□□□□□ -0.4
IMP4-206ENST00000456713 APOMO95445 188 aa12.54□□□□□ -0.4
IMP4-206ENST00000456713 HBDP02042 147 aa12.54□□□□□ -0.4
IMP4-206ENST00000456713 CHCHD1Q96BP2 118 aaKnown RBP12.54□□□□□ -0.4
IMP4-206ENST00000456713 FAM30AQ9NZY2 134 aa12.54□□□□□ -0.4
IMP4-206ENST00000456713 A0A087WZ39 114 aa12.53□□□□□ -0.4
IMP4-206ENST00000456713 SCO1O75880 301 aa12.53□□□□□ -0.4
IMP4-206ENST00000456713 SEC11AP67812 179 aa12.53□□□□□ -0.4
IMP4-206ENST00000456713 HSPG2P98160 4391 aa12.53□□□□□ -0.4
IMP4-206ENST00000456713 ZNF561-AS1K7EIQ3 104 aa12.52□□□□□ -0.41
IMP4-206ENST00000456713 COX6A2Q02221 97 aa12.52□□□□□ -0.41
IMP4-206ENST00000456713 LINC01561Q8N1V8 128 aa12.52□□□□□ -0.41
IMP4-206ENST00000456713 OR10D4PQ8NGN7 298 aa12.52□□□□□ -0.41
IMP4-206ENST00000456713 IGHV3-64A0A075B6Q5 118 aa12.51□□□□□ -0.41
IMP4-206ENST00000456713 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.51□□□□□ -0.41
IMP4-206ENST00000456713 PDZD11Q5EBL8 140 aa12.51□□□□□ -0.41
IMP4-206ENST00000456713 SDIM1Q6ZPB5 146 aa12.5□□□□□ -0.41
IMP4-206ENST00000456713 HERVK_113P63121 156 aa12.49□□□□□ -0.41
IMP4-206ENST00000456713 PMVKQ15126 192 aa12.49□□□□□ -0.41
IMP4-206ENST00000456713 C2orf48Q96LS8 159 aa12.49□□□□□ -0.41
IMP4-206ENST00000456713 CST9LQ9H4G1 147 aa12.49□□□□□ -0.41
IMP4-206ENST00000456713 IGLV4-69A0A075B6H9 119 aa12.48□□□□□ -0.41
IMP4-206ENST00000456713 ATP5LO75964 103 aa12.48□□□□□ -0.41
IMP4-206ENST00000456713 PMCHL1Q16048 86 aa12.48□□□□□ -0.41
IMP4-206ENST00000456713 BAGE3Q86Y29 109 aa12.48□□□□□ -0.41
IMP4-206ENST00000456713 LINC00526Q96FQ7 95 aa12.48□□□□□ -0.41
IMP4-206ENST00000456713 DNAH8Q96JB1 4490 aa12.48□□□□□ -0.41
IMP4-206ENST00000456713 F8WDY8 70 aa12.47□□□□□ -0.41
IMP4-206ENST00000456713 S100A1P23297 94 aa12.47□□□□□ -0.41
IMP4-206ENST00000456713 SPAG11BQ08648 103 aa12.47□□□□□ -0.41
IMP4-206ENST00000456713 SYCNQ0VAF6 134 aa12.47□□□□□ -0.41
IMP4-206ENST00000456713 ORAOV1Q8WV07 137 aa12.47□□□□□ -0.41
IMP4-206ENST00000456713 CARD19Q96LW7 228 aa12.47□□□□□ -0.41
IMP4-206ENST00000456713 TINCRA0A1B0GVN0 87 aa12.46□□□□□ -0.41
IMP4-206ENST00000456713 CHAC1Q9BUX1 264 aa12.46□□□□□ -0.41
IMP4-206ENST00000456713 GEMIN7Q9H840 131 aaKnown RBP12.46□□□□□ -0.41
IMP4-206ENST00000456713 IGLV5-45A0A087WSX0 123 aa12.45□□□□□ -0.42
IMP4-206ENST00000456713 A0A0J9YXV3 536 aa12.45□□□□□ -0.42
IMP4-206ENST00000456713 HSBP1O75506 76 aa12.45□□□□□ -0.42
IMP4-206ENST00000456713 CIRBPQ14011 172 aaKnown RBP12.45□□□□□ -0.42
IMP4-206ENST00000456713 PKIGQ9Y2B9 76 aa12.45□□□□□ -0.42
IMP4-206ENST00000456713 RYR1P21817 5038 aa12.45□□□□□ -0.42
IMP4-206ENST00000456713 LINC00310P59036 64 aa12.44□□□□□ -0.42
IMP4-206ENST00000456713 Q8N1X5 172 aa12.44□□□□□ -0.42
IMP4-206ENST00000456713 CDKN2A-AS1Q9UH64 79 aa12.44□□□□□ -0.42
IMP4-206ENST00000456713 HERC2O95714 4834 aa12.44□□□□□ -0.42
IMP4-206ENST00000456713 KIAA0087Q14695 138 aa12.43□□□□□ -0.42
IMP4-206ENST00000456713 Q6ZRU5 148 aa12.43□□□□□ -0.42
IMP4-206ENST00000456713 SCXQ7RTU7 201 aa12.43□□□□□ -0.42
IMP4-206ENST00000456713 CAMK2N2Q96S95 79 aa12.43□□□□□ -0.42
IMP4-206ENST00000456713 ATP6V1G1O75348 118 aa12.42□□□□□ -0.42
IMP4-206ENST00000456713 SERF1AO75920 110 aa12.42□□□□□ -0.42
IMP4-206ENST00000456713 HAMPP81172 84 aa12.42□□□□□ -0.42
IMP4-206ENST00000456713 KRTAP17-1Q9BYP8 105 aa12.42□□□□□ -0.42
IMP4-206ENST00000456713 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.42□□□□□ -0.42
IMP4-206ENST00000456713 IGLC3P0DOY3 106 aa12.41□□□□□ -0.42
IMP4-206ENST00000456713 RNF151Q2KHN1 245 aa12.41□□□□□ -0.42
IMP4-206ENST00000456713 MRPL35Q9NZE8 188 aaKnown RBP12.41□□□□□ -0.42
IMP4-206ENST00000456713 LINC00469Q8N7U9 141 aa12.4□□□□□ -0.42
IMP4-206ENST00000456713 CIRBP-AS1Q8TBR5 109 aa12.4□□□□□ -0.42
IMP4-206ENST00000456713 IFI27L1Q96BM0 104 aa12.4□□□□□ -0.42
IMP4-206ENST00000456713 PANO1I0J062 215 aa12.39□□□□□ -0.43
IMP4-206ENST00000456713 NDUFA1O15239 70 aa12.39□□□□□ -0.43
IMP4-206ENST00000456713 HIST1H2BKO60814 126 aa12.39□□□□□ -0.43
IMP4-206ENST00000456713 HIST1H2BJP06899 126 aa12.39□□□□□ -0.43
IMP4-206ENST00000456713 HIST1H2BOP23527 126 aa12.39□□□□□ -0.43
IMP4-206ENST00000456713 HIST1H2BBP33778 126 aa12.39□□□□□ -0.43
IMP4-206ENST00000456713 HIST1H2BDP58876 126 aa12.39□□□□□ -0.43
IMP4-206ENST00000456713 HIST1H2BCP62807 126 aa12.39□□□□□ -0.43
IMP4-206ENST00000456713 HIST2H2BEQ16778 126 aa12.39□□□□□ -0.43
IMP4-206ENST00000456713 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.39□□□□□ -0.43
IMP4-206ENST00000456713 FAM19A2Q8N3H0 131 aa12.39□□□□□ -0.43
IMP4-206ENST00000456713 SPACA4Q8TDM5 124 aa12.39□□□□□ -0.43
IMP4-206ENST00000456713 HIST1H2BHQ93079 126 aa12.39□□□□□ -0.43
IMP4-206ENST00000456713 PACRGQ96M98 296 aaPredicted RBP12.39□□□□□ -0.43
IMP4-206ENST00000456713 HIST1H2BNQ99877 126 aa12.39□□□□□ -0.43
IMP4-206ENST00000456713 HIST1H2BMQ99879 126 aa12.39□□□□□ -0.43
IMP4-206ENST00000456713 NDUFA6P56556 154 aa12.38□□□□□ -0.43
IMP4-206ENST00000456713 Q8IZM0 81 aa12.38□□□□□ -0.43
IMP4-206ENST00000456713 TRAV12-1A0A0B4J245 112 aa12.37□□□□□ -0.43
IMP4-206ENST00000456713 SMIM1B2RUZ4 78 aa12.37□□□□□ -0.43
IMP4-206ENST00000456713 LOC107984640A0A0U1RRK4 108 aa12.36□□□□□ -0.43
IMP4-206ENST00000456713 CHTF8P0CG12 524 aa12.36□□□□□ -0.43
IMP4-206ENST00000456713 LINC00474Q9P2X8 69 aa12.36□□□□□ -0.43
IMP4-206ENST00000456713 A0A096LNI7 61 aa12.35□□□□□ -0.43
IMP4-206ENST00000456713 H3BRM9 83 aa12.35□□□□□ -0.43
IMP4-206ENST00000456713 NUPR1O60356 82 aa12.35□□□□□ -0.43
IMP4-206ENST00000456713 PRSS2P07478 247 aa12.35□□□□□ -0.43
IMP4-206ENST00000456713 TRBV30A0A0K0K1B3 111 aa12.34□□□□□ -0.43
IMP4-206ENST00000456713 LEPROTL1O95214 131 aa12.34□□□□□ -0.43
IMP4-206ENST00000456713 SMR3BP02814 79 aaPredicted RBP12.34□□□□□ -0.43
IMP4-206ENST00000456713 C10orf25Q5T742 122 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms