RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 SBSPONQ8IVN8 264 aa5.53□□□□□ -1.52
BRCC3-208ENST00000453705 F8P00451 2351 aa5.52□□□□□ -1.53
BRCC3-208ENST00000453705 ZNF688P0C7X2 276 aa5.52□□□□□ -1.53
BRCC3-208ENST00000453705 HLA-DMBP28068 263 aa5.52□□□□□ -1.53
BRCC3-208ENST00000453705 BLCAPP62952 87 aa5.52□□□□□ -1.53
BRCC3-208ENST00000453705 RBM3P98179 157 aaKnown RBP5.52□□□□□ -1.53
BRCC3-208ENST00000453705 KRTAP1-1Q07627 177 aa5.52□□□□□ -1.53
BRCC3-208ENST00000453705 ZNF876PQ49A33 203 aa5.52□□□□□ -1.53
BRCC3-208ENST00000453705 ZNF575Q86XF7 245 aa5.52□□□□□ -1.53
BRCC3-208ENST00000453705 SH2D1AO60880 128 aa5.52□□□□□ -1.53
BRCC3-208ENST00000453705 IGHV3-23P01764 117 aa5.52□□□□□ -1.53
BRCC3-208ENST00000453705 KLK15Q9H2R5 256 aa5.52□□□□□ -1.53
BRCC3-208ENST00000453705 S4R3C0 116 aa5.52□□□□□ -1.53
BRCC3-208ENST00000453705 A0A1B0GUT8 65 aa5.51□□□□□ -1.53
BRCC3-208ENST00000453705 M0R3E3 92 aa5.51□□□□□ -1.53
BRCC3-208ENST00000453705 FHL2Q14192 279 aa5.51□□□□□ -1.53
BRCC3-208ENST00000453705 LY6EQ16553 131 aa5.51□□□□□ -1.53
BRCC3-208ENST00000453705 NANOS2P60321 138 aaKnown RBP5.51□□□□□ -1.53
BRCC3-208ENST00000453705 WWC2-AS2Q96NR7 200 aa5.51□□□□□ -1.53
BRCC3-208ENST00000453705 CHAC1Q9BUX1 264 aa5.51□□□□□ -1.53
BRCC3-208ENST00000453705 ACANP16112 2415 aa5.51□□□□□ -1.53
BRCC3-208ENST00000453705 HIVEP1P15822 2718 aa5.51□□□□□ -1.53
BRCC3-208ENST00000453705 KRTAP16-1A8MUX0 517 aa5.51□□□□□ -1.53
BRCC3-208ENST00000453705 SCXQ7RTU7 201 aa5.51□□□□□ -1.53
BRCC3-208ENST00000453705 NRACQ8N912 160 aa5.51□□□□□ -1.53
BRCC3-208ENST00000453705 OPRPNQ99935 248 aaPredicted RBP5.51□□□□□ -1.53
BRCC3-208ENST00000453705 JMJD1CQ15652 2540 aa5.5□□□□□ -1.53
BRCC3-208ENST00000453705 HBDP02042 147 aa5.5□□□□□ -1.53
BRCC3-208ENST00000453705 NHP2Q9NX24 153 aaKnown RBP5.5□□□□□ -1.53
BRCC3-208ENST00000453705 DHRS4-AS1Q9P1J3 65 aa5.5□□□□□ -1.53
BRCC3-208ENST00000453705 LINC00474Q9P2X8 69 aa5.5□□□□□ -1.53
BRCC3-208ENST00000453705 VPS13CQ709C8 3753 aa5.5□□□□□ -1.53
BRCC3-208ENST00000453705 IGKV2-40A0A087WW87 121 aaPredicted RBP5.5□□□□□ -1.53
BRCC3-208ENST00000453705 KRTAP23-1A1A580 65 aa5.5□□□□□ -1.53
BRCC3-208ENST00000453705 IGKV2D-40P01614 121 aaPredicted RBP5.5□□□□□ -1.53
BRCC3-208ENST00000453705 CD28P10747 220 aa5.5□□□□□ -1.53
BRCC3-208ENST00000453705 S100A4P26447 101 aaKnown RBP5.5□□□□□ -1.53
BRCC3-208ENST00000453705 POM121L12Q8N7R1 296 aa5.5□□□□□ -1.53
BRCC3-208ENST00000453705 C4orf3Q8WVX3 66 aa5.5□□□□□ -1.53
BRCC3-208ENST00000453705 C8orf49Q96NF6 230 aa5.5□□□□□ -1.53
BRCC3-208ENST00000453705 SPANXDQ9BXN6 97 aa5.5□□□□□ -1.53
BRCC3-208ENST00000453705 FUSP35637 526 aaKnown RBP eCLIP5.49□□□□□ -1.53
BRCC3-208ENST00000453705 CIRBPQ14011 172 aaKnown RBP5.49□□□□□ -1.53
BRCC3-208ENST00000453705 C7orf65Q6ZTY9 151 aa5.49□□□□□ -1.53
BRCC3-208ENST00000453705 NBEAL1Q6ZS30 2694 aa5.49□□□□□ -1.53
BRCC3-208ENST00000453705 A0A096LNJ9 63 aa5.49□□□□□ -1.53
BRCC3-208ENST00000453705 TRBV25-1A0A075B6N4 114 aa5.48□□□□□ -1.53
BRCC3-208ENST00000453705 PRAC2D3DTV9 90 aa5.48□□□□□ -1.53
BRCC3-208ENST00000453705 LEPROTO15243 131 aa5.48□□□□□ -1.53
BRCC3-208ENST00000453705 IGKCP01834 107 aa5.48□□□□□ -1.53
BRCC3-208ENST00000453705 ZFAND2AQ8N6M9 145 aa5.48□□□□□ -1.53
BRCC3-208ENST00000453705 RHPN1-AS1Q9BWJ2 59 aa5.48□□□□□ -1.53
BRCC3-208ENST00000453705 LY6G6DO95868 133 aa5.48□□□□□ -1.53
BRCC3-208ENST00000453705 FAM104BQ5XKR9 115 aa5.48□□□□□ -1.53
BRCC3-208ENST00000453705 LINC01600Q96MT4 127 aa5.48□□□□□ -1.53
BRCC3-208ENST00000453705 IGLV5-37A0A075B6J1 123 aa5.47□□□□□ -1.53
BRCC3-208ENST00000453705 EGFEM1PQ0D2K5 195 aa5.47□□□□□ -1.53
BRCC3-208ENST00000453705 DIRC1Q969H9 104 aa5.47□□□□□ -1.53
BRCC3-208ENST00000453705 LINC00467Q9BRT7 94 aa5.47□□□□□ -1.53
BRCC3-208ENST00000453705 ABCA1O95477 2261 aa5.47□□□□□ -1.53
BRCC3-208ENST00000453705 TLN2Q9Y4G6 2542 aa5.47□□□□□ -1.53
BRCC3-208ENST00000453705 ARMS2P0C7Q2 107 aa5.47□□□□□ -1.53
BRCC3-208ENST00000453705 TRAV21A0A0B4J279 112 aa5.46□□□□□ -1.54
BRCC3-208ENST00000453705 IGKV3D-20A0A0C4DH25 116 aa5.46□□□□□ -1.54
BRCC3-208ENST00000453705 UBE2D3P61077 147 aa5.46□□□□□ -1.54
BRCC3-208ENST00000453705 UBE2D2P62837 147 aa5.46□□□□□ -1.54
BRCC3-208ENST00000453705 LYZL1Q6UWQ5 148 aa5.46□□□□□ -1.54
BRCC3-208ENST00000453705 MED13LQ71F56 2210 aa5.46□□□□□ -1.54
BRCC3-208ENST00000453705 TRBV7-3A0A075B6L6 115 aa5.45□□□□□ -1.54
BRCC3-208ENST00000453705 AMN1Q8IY45 258 aa5.45□□□□□ -1.54
BRCC3-208ENST00000453705 PRSS3P2Q8NHM4 247 aa5.45□□□□□ -1.54
BRCC3-208ENST00000453705 IFI27L1Q96BM0 104 aa5.45□□□□□ -1.54
BRCC3-208ENST00000453705 K7EMI3 77 aa5.45□□□□□ -1.54
BRCC3-208ENST00000453705 SMR3AQ99954 134 aa5.45□□□□□ -1.54
BRCC3-208ENST00000453705 IGHV4OR15-8A0A075B7B6 117 aa5.44□□□□□ -1.54
BRCC3-208ENST00000453705 A0A087WW49 117 aa5.44□□□□□ -1.54
BRCC3-208ENST00000453705 IGHV3-11P01762 117 aa5.44□□□□□ -1.54
BRCC3-208ENST00000453705 IGKV2D-26A0A0A0MRZ7 120 aa5.44□□□□□ -1.54
BRCC3-208ENST00000453705 A0A0J9YX75 114 aa5.44□□□□□ -1.54
BRCC3-208ENST00000453705 C15orf53Q8NAA6 179 aa5.44□□□□□ -1.54
BRCC3-208ENST00000453705 Q8TAT8 98 aa5.44□□□□□ -1.54
BRCC3-208ENST00000453705 CLEC2BQ92478 149 aa5.44□□□□□ -1.54
BRCC3-208ENST00000453705 ZNF469Q96JG9 3925 aaPredicted RBP5.43□□□□□ -1.54
BRCC3-208ENST00000453705 MYMXA0A1B0GTQ4 84 aa5.43□□□□□ -1.54
BRCC3-208ENST00000453705 ORMDL3Q8N138 153 aa5.43□□□□□ -1.54
BRCC3-208ENST00000453705 AKAP9Q99996 3911 aa5.43□□□□□ -1.54
BRCC3-208ENST00000453705 IGHV3-35A0A0C4DH35 117 aa5.43□□□□□ -1.54
BRCC3-208ENST00000453705 A0A0J9YXY3 114 aa5.43□□□□□ -1.54
BRCC3-208ENST00000453705 MRPL51Q4U2R6 128 aaKnown RBP5.43□□□□□ -1.54
BRCC3-208ENST00000453705 PRR9Q5T870 116 aa5.42□□□□□ -1.54
BRCC3-208ENST00000453705 STAB1Q9NY15 2570 aa5.42□□□□□ -1.54
BRCC3-208ENST00000453705 ANK3Q12955 4377 aaKnown RBP5.42□□□□□ -1.54
BRCC3-208ENST00000453705 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.42□□□□□ -1.54
BRCC3-208ENST00000453705 IFI27P40305 119 aaPredicted RBP5.42□□□□□ -1.54
BRCC3-208ENST00000453705 NACAE9PAV3 2078 aa5.42□□□□□ -1.54
BRCC3-208ENST00000453705 IGHV3-66A0A0C4DH42 116 aa5.41□□□□□ -1.54
BRCC3-208ENST00000453705 PPP1R17O96001 155 aa5.41□□□□□ -1.54
BRCC3-208ENST00000453705 NPYP01303 97 aa5.41□□□□□ -1.54
BRCC3-208ENST00000453705 PRSS1P07477 247 aa5.41□□□□□ -1.54
BRCC3-208ENST00000453705 CFC1BP0CG36 223 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms