RNA–Protein interactions for RNA: ENST00000452776.1

SMCO1-202, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

TSL 1 (best)

Gene SMCO1, Length 1,846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-202ENST00000452776 TRBV10-1A0A0K0K1A3 114 aa5.93□□□□□ -1.46
SMCO1-202ENST00000452776 IGHV4-38-2P0DP08 117 aa5.93□□□□□ -1.46
SMCO1-202ENST00000452776 Q8NA96 180 aa5.93□□□□□ -1.46
SMCO1-202ENST00000452776 C11orf72Q8NBR9 251 aa5.93□□□□□ -1.46
SMCO1-202ENST00000452776 BPESC1Q9GZL8 116 aa5.93□□□□□ -1.46
SMCO1-202ENST00000452776 CADP27708 2225 aa5.93□□□□□ -1.46
SMCO1-202ENST00000452776 IGHV3-73A0A0B4J1V6 119 aa5.92□□□□□ -1.46
SMCO1-202ENST00000452776 LYNX1G3V0Z9 82 aa5.92□□□□□ -1.46
SMCO1-202ENST00000452776 BPY2O14599 106 aa5.92□□□□□ -1.46
SMCO1-202ENST00000452776 LYNX1P0DP58 116 aa5.92□□□□□ -1.46
SMCO1-202ENST00000452776 NTM-AS1Q6ZSK4 140 aa5.92□□□□□ -1.46
SMCO1-202ENST00000452776 Q6ZTC4 211 aa5.92□□□□□ -1.46
SMCO1-202ENST00000452776 SPTBN4Q9H254 2564 aa5.92□□□□□ -1.46
SMCO1-202ENST00000452776 IGKV3-7A0A075B6H7 116 aa5.91□□□□□ -1.46
SMCO1-202ENST00000452776 KRTAP19-1Q8IUB9 90 aa5.91□□□□□ -1.46
SMCO1-202ENST00000452776 RETNQ9HD89 108 aa5.91□□□□□ -1.46
SMCO1-202ENST00000452776 CDH23Q9H251 3354 aa5.91□□□□□ -1.46
SMCO1-202ENST00000452776 KMT2BQ9UMN6 2715 aaPredicted RBP5.9□□□□□ -1.46
SMCO1-202ENST00000452776 K7EQG2 157 aa5.9□□□□□ -1.46
SMCO1-202ENST00000452776 UBE2L6O14933 153 aa5.9□□□□□ -1.46
SMCO1-202ENST00000452776 SPINK13Q1W4C9 94 aa5.9□□□□□ -1.46
SMCO1-202ENST00000452776 TM2D3Q9BRN9 247 aa5.9□□□□□ -1.46
SMCO1-202ENST00000452776 NBEAQ8NFP9 2946 aa5.9□□□□□ -1.46
SMCO1-202ENST00000452776 TMEM89A2RUT3 159 aa5.9□□□□□ -1.47
SMCO1-202ENST00000452776 GNLYP22749 145 aa5.9□□□□□ -1.47
SMCO1-202ENST00000452776 PROK1P58294 105 aa5.9□□□□□ -1.47
SMCO1-202ENST00000452776 CFAP54Q96N23 3096 aa5.89□□□□□ -1.47
SMCO1-202ENST00000452776 AHCTF1Q8WYP5 2266 aa5.89□□□□□ -1.47
SMCO1-202ENST00000452776 A0A087WZ39 114 aa5.89□□□□□ -1.47
SMCO1-202ENST00000452776 SDK1Q7Z5N4 2213 aa5.89□□□□□ -1.47
SMCO1-202ENST00000452776 EPG5Q9HCE0 2579 aa5.89□□□□□ -1.47
SMCO1-202ENST00000452776 hDV103S1A0JD37 113 aa5.88□□□□□ -1.47
SMCO1-202ENST00000452776 NDUFS5O43920 106 aa5.88□□□□□ -1.47
SMCO1-202ENST00000452776 COX17Q14061 63 aa5.88□□□□□ -1.47
SMCO1-202ENST00000452776 FAM229BQ4G0N7 80 aa5.88□□□□□ -1.47
SMCO1-202ENST00000452776 LINC00575Q6W349 94 aa5.88□□□□□ -1.47
SMCO1-202ENST00000452776 Q6ZSN1 163 aa5.88□□□□□ -1.47
SMCO1-202ENST00000452776 Q6ZTI0 123 aa5.88□□□□□ -1.47
SMCO1-202ENST00000452776 MUC7Q8TAX7 377 aa5.88□□□□□ -1.47
SMCO1-202ENST00000452776 A8MTW9 85 aa5.88□□□□□ -1.47
SMCO1-202ENST00000452776 UBE2BP63146 152 aa5.88□□□□□ -1.47
SMCO1-202ENST00000452776 ATRXP46100 2492 aa5.87□□□□□ -1.47
SMCO1-202ENST00000452776 PLCE1Q9P212 2302 aa5.87□□□□□ -1.47
SMCO1-202ENST00000452776 IGKV3-20P01619 116 aa5.87□□□□□ -1.47
SMCO1-202ENST00000452776 ADORA2A-AS1P86434 159 aa5.87□□□□□ -1.47
SMCO1-202ENST00000452776 DEFB109BQ30KR1 87 aa5.87□□□□□ -1.47
SMCO1-202ENST00000452776 Q96MF0 132 aa5.87□□□□□ -1.47
SMCO1-202ENST00000452776 TOMM7Q9P0U1 55 aa5.87□□□□□ -1.47
SMCO1-202ENST00000452776 ICE1Q9Y2F5 2266 aa5.87□□□□□ -1.47
SMCO1-202ENST00000452776 FRYQ5TBA9 3013 aa5.86□□□□□ -1.47
SMCO1-202ENST00000452776 URB1O60287 2271 aaKnown RBP5.86□□□□□ -1.47
SMCO1-202ENST00000452776 IGLV1-40P01703 118 aa5.85□□□□□ -1.47
SMCO1-202ENST00000452776 DEFB114Q30KQ6 69 aa5.85□□□□□ -1.47
SMCO1-202ENST00000452776 UNC79Q9P2D8 2635 aa5.85□□□□□ -1.47
SMCO1-202ENST00000452776 RNASE1P07998 156 aaKnown RBP5.85□□□□□ -1.47
SMCO1-202ENST00000452776 LCE1DQ5T752 114 aa5.85□□□□□ -1.47
SMCO1-202ENST00000452776 KTN1-AS1Q86SY8 53 aa5.85□□□□□ -1.47
SMCO1-202ENST00000452776 OCR1Q9BZK8 76 aa5.85□□□□□ -1.47
SMCO1-202ENST00000452776 WDFY4Q6ZS81 3184 aa5.85□□□□□ -1.47
SMCO1-202ENST00000452776 CHD6Q8TD26 2715 aa5.84□□□□□ -1.47
SMCO1-202ENST00000452776 IGHV3OR16-9A0A0B4J2B5 98 aa5.84□□□□□ -1.47
SMCO1-202ENST00000452776 LY6HO94772 140 aa5.84□□□□□ -1.47
SMCO1-202ENST00000452776 IGHV3-11P01762 117 aa5.84□□□□□ -1.47
SMCO1-202ENST00000452776 WNK2Q9Y3S1 2297 aa5.84□□□□□ -1.47
SMCO1-202ENST00000452776 LAMA1P25391 3075 aa5.83□□□□□ -1.48
SMCO1-202ENST00000452776 A0A1B0GW54 56 aa5.83□□□□□ -1.48
SMCO1-202ENST00000452776 IGHV4-31P0DP07 118 aa5.83□□□□□ -1.48
SMCO1-202ENST00000452776 Q8IZM0 81 aa5.83□□□□□ -1.48
SMCO1-202ENST00000452776 HTN1P15515 57 aa5.83□□□□□ -1.48
SMCO1-202ENST00000452776 NANOS2P60321 138 aaKnown RBP5.83□□□□□ -1.48
SMCO1-202ENST00000452776 STHQ8IWL8 128 aa5.83□□□□□ -1.48
SMCO1-202ENST00000452776 MDFIQ99750 246 aa5.83□□□□□ -1.48
SMCO1-202ENST00000452776 CYP4F30PQ9H0H9 118 aa5.83□□□□□ -1.48
SMCO1-202ENST00000452776 A0A096LNT2 108 aa5.82□□□□□ -1.48
SMCO1-202ENST00000452776 NDUFB1O75438 58 aa5.82□□□□□ -1.48
SMCO1-202ENST00000452776 ZFP36P26651 326 aaKnown RBP5.82□□□□□ -1.48
SMCO1-202ENST00000452776 UBE2AP49459 152 aa5.82□□□□□ -1.48
SMCO1-202ENST00000452776 LMO4P61968 165 aa5.82□□□□□ -1.48
SMCO1-202ENST00000452776 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.82□□□□□ -1.48
SMCO1-202ENST00000452776 SPATA3Q8NHX4 192 aa5.82□□□□□ -1.48
SMCO1-202ENST00000452776 Q9UF83 564 aa5.82□□□□□ -1.48
SMCO1-202ENST00000452776 INSP01308 110 aa5.81□□□□□ -1.48
SMCO1-202ENST00000452776 Q6ZRP5 223 aa5.81□□□□□ -1.48
SMCO1-202ENST00000452776 ARRDC1-AS1Q9H2J1 176 aa5.81□□□□□ -1.48
SMCO1-202ENST00000452776 ANKRD11Q6UB99 2663 aaPredicted RBP5.81□□□□□ -1.48
SMCO1-202ENST00000452776 SETXQ7Z333 2677 aaKnown RBP5.81□□□□□ -1.48
SMCO1-202ENST00000452776 ZFHX2Q9C0A1 2572 aaPredicted RBP5.81□□□□□ -1.48
SMCO1-202ENST00000452776 LCE6AA0A183 80 aa5.81□□□□□ -1.48
SMCO1-202ENST00000452776 CCL24O00175 119 aa5.81□□□□□ -1.48
SMCO1-202ENST00000452776 COX7BP24311 80 aa5.81□□□□□ -1.48
SMCO1-202ENST00000452776 C6orf99Q4VX62 202 aa5.81□□□□□ -1.48
SMCO1-202ENST00000452776 ATP11AUNQ6ZP68 121 aa5.81□□□□□ -1.48
SMCO1-202ENST00000452776 BBC3Q96PG8 261 aaPredicted RBP5.81□□□□□ -1.48
SMCO1-202ENST00000452776 ABCA4P78363 2273 aa5.8□□□□□ -1.48
SMCO1-202ENST00000452776 TRBV6-8A0A0A6YYG3 113 aa5.8□□□□□ -1.48
SMCO1-202ENST00000452776 TRAV22A0A0B4J277 110 aa5.8□□□□□ -1.48
SMCO1-202ENST00000452776 FBXL19-AS1Q494R0 122 aa5.8□□□□□ -1.48
SMCO1-202ENST00000452776 LIMD2Q9BT23 127 aa5.8□□□□□ -1.48
SMCO1-202ENST00000452776 ZFHX4Q86UP3 3567 aa5.8□□□□□ -1.48
SMCO1-202ENST00000452776 REV3LO60673 3130 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms