RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 SPINK13Q1W4C9 94 aa9.76□□□□□ -0.85
SYNGAP1-204ENST00000449372 FAM218AQ96MZ4 157 aa9.76□□□□□ -0.85
SYNGAP1-204ENST00000449372 APCP25054 2843 aa9.76□□□□□ -0.85
SYNGAP1-204ENST00000449372 DEFB112Q30KQ8 113 aa9.76□□□□□ -0.85
SYNGAP1-204ENST00000449372 C14orf132Q9NPU4 83 aa9.76□□□□□ -0.85
SYNGAP1-204ENST00000449372 C20orf197Q8N268 126 aa9.75□□□□□ -0.85
SYNGAP1-204ENST00000449372 DEFB1P60022 68 aa9.75□□□□□ -0.85
SYNGAP1-204ENST00000449372 GHRHP01286 108 aa9.75□□□□□ -0.85
SYNGAP1-204ENST00000449372 IGHV4-31P0DP07 118 aa9.75□□□□□ -0.85
SYNGAP1-204ENST00000449372 UBE2D4Q9Y2X8 147 aa9.75□□□□□ -0.85
SYNGAP1-204ENST00000449372 A0A0U1RRA0 63 aa9.74□□□□□ -0.85
SYNGAP1-204ENST00000449372 RBMY1BA6NDE4 496 aaKnown RBP9.74□□□□□ -0.85
SYNGAP1-204ENST00000449372 RBMY1EA6NEQ0 496 aaKnown RBP9.74□□□□□ -0.85
SYNGAP1-204ENST00000449372 IGHV4-59P01825 116 aa9.74□□□□□ -0.85
SYNGAP1-204ENST00000449372 RBMY1DP0C7P1 496 aaKnown RBP9.74□□□□□ -0.85
SYNGAP1-204ENST00000449372 RBMY1A1P0DJD3 496 aaKnown RBP9.74□□□□□ -0.85
SYNGAP1-204ENST00000449372 RBMY1CP0DJD4 496 aa9.74□□□□□ -0.85
SYNGAP1-204ENST00000449372 RBMY1FQ15415 496 aaKnown RBP9.74□□□□□ -0.85
SYNGAP1-204ENST00000449372 LINC00308Q8TCZ7 52 aa9.74□□□□□ -0.85
SYNGAP1-204ENST00000449372 RNASE13Q5GAN3 156 aaKnown RBP9.74□□□□□ -0.85
SYNGAP1-204ENST00000449372 LRRK2Q5S007 2527 aa9.74□□□□□ -0.85
SYNGAP1-204ENST00000449372 MAPK1IP1LQ8NDC0 245 aa9.73□□□□□ -0.85
SYNGAP1-204ENST00000449372 IL17DQ8TAD2 202 aa9.73□□□□□ -0.85
SYNGAP1-204ENST00000449372 EPM2AB3EWF7 344 aa9.73□□□□□ -0.85
SYNGAP1-204ENST00000449372 HOXD3P31249 432 aaPredicted RBP9.73□□□□□ -0.85
SYNGAP1-204ENST00000449372 DEFB113Q30KQ7 82 aa9.73□□□□□ -0.85
SYNGAP1-204ENST00000449372 KNCNA6PVL3 124 aa9.72□□□□□ -0.85
SYNGAP1-204ENST00000449372 CUBNO60494 3623 aa9.72□□□□□ -0.85
SYNGAP1-204ENST00000449372 KMT2BQ9UMN6 2715 aaPredicted RBP9.72□□□□□ -0.85
SYNGAP1-204ENST00000449372 HTN1P15515 57 aa9.72□□□□□ -0.85
SYNGAP1-204ENST00000449372 HILS1P60008 231 aa9.72□□□□□ -0.85
SYNGAP1-204ENST00000449372 TRAV23DV6A0A075B6W5 121 aa9.71□□□□□ -0.85
SYNGAP1-204ENST00000449372 XCL1P47992 114 aa9.71□□□□□ -0.85
SYNGAP1-204ENST00000449372 XCL2Q9UBD3 114 aa9.71□□□□□ -0.85
SYNGAP1-204ENST00000449372 POLQO75417 2590 aa9.71□□□□□ -0.86
SYNGAP1-204ENST00000449372 SMIM26A0A096LP01 95 aa9.71□□□□□ -0.86
SYNGAP1-204ENST00000449372 C9orf129Q5T035 196 aaKnown RBP9.71□□□□□ -0.86
SYNGAP1-204ENST00000449372 DYNLRB2Q8TF09 96 aa9.71□□□□□ -0.86
SYNGAP1-204ENST00000449372 C16orf95Q9H693 158 aa9.71□□□□□ -0.86
SYNGAP1-204ENST00000449372 Q6YL49 198 aa9.71□□□□□ -0.86
SYNGAP1-204ENST00000449372 ZNF625Q96I27 306 aaPredicted RBP9.7□□□□□ -0.86
SYNGAP1-204ENST00000449372 EPG5Q9HCE0 2579 aa9.7□□□□□ -0.86
SYNGAP1-204ENST00000449372 NDUFA1O15239 70 aa9.7□□□□□ -0.86
SYNGAP1-204ENST00000449372 INSP01308 110 aa9.7□□□□□ -0.86
SYNGAP1-204ENST00000449372 USP9YO00507 2555 aaPredicted RBP9.69□□□□□ -0.86
SYNGAP1-204ENST00000449372 RPL28P46779 137 aaKnown RBP9.69□□□□□ -0.86
SYNGAP1-204ENST00000449372 RETNQ9HD89 108 aa9.69□□□□□ -0.86
SYNGAP1-204ENST00000449372 PDZD2O15018 2839 aa9.69□□□□□ -0.86
SYNGAP1-204ENST00000449372 TEX15Q9BXT5 2789 aa9.69□□□□□ -0.86
SYNGAP1-204ENST00000449372 C10orf99Q6UWK7 81 aa9.69□□□□□ -0.86
SYNGAP1-204ENST00000449372 FP248Q71RG6 208 aaPredicted RBP9.69□□□□□ -0.86
SYNGAP1-204ENST00000449372 PF4P02776 101 aa9.68□□□□□ -0.86
SYNGAP1-204ENST00000449372 RPL36AP83881 106 aaKnown RBP9.68□□□□□ -0.86
SYNGAP1-204ENST00000449372 RPL36ALQ969Q0 106 aaKnown RBP9.68□□□□□ -0.86
SYNGAP1-204ENST00000449372 UBE2E2Q96LR5 201 aa9.68□□□□□ -0.86
SYNGAP1-204ENST00000449372 FAM104AQ969W3 186 aa9.68□□□□□ -0.86
SYNGAP1-204ENST00000449372 ANK3Q12955 4377 aaKnown RBP9.67□□□□□ -0.86
SYNGAP1-204ENST00000449372 WFDC9Q8NEX5 89 aa9.67□□□□□ -0.86
SYNGAP1-204ENST00000449372 H7BZZ5 65 aa9.67□□□□□ -0.86
SYNGAP1-204ENST00000449372 ZNF702PQ9H963 129 aa9.67□□□□□ -0.86
SYNGAP1-204ENST00000449372 FAM208BQ5VWN6 2430 aa9.67□□□□□ -0.86
SYNGAP1-204ENST00000449372 DEFB131AP59861 70 aa9.67□□□□□ -0.86
SYNGAP1-204ENST00000449372 SOSTDC1Q6X4U4 206 aa9.67□□□□□ -0.86
SYNGAP1-204ENST00000449372 TRAV13-2A0A0B4J235 113 aa9.66□□□□□ -0.86
SYNGAP1-204ENST00000449372 Q9H8V8 135 aa9.66□□□□□ -0.86
SYNGAP1-204ENST00000449372 IGHV3-53P01767 116 aa9.66□□□□□ -0.86
SYNGAP1-204ENST00000449372 C6orf226Q5I0X4 101 aa9.66□□□□□ -0.86
SYNGAP1-204ENST00000449372 HIST2H2BCQ6DN03 193 aa9.66□□□□□ -0.86
SYNGAP1-204ENST00000449372 HIST2H2BDQ6DRA6 164 aa9.66□□□□□ -0.86
SYNGAP1-204ENST00000449372 PTPN13Q12923 2485 aa9.66□□□□□ -0.86
SYNGAP1-204ENST00000449372 RBM3P98179 157 aaKnown RBP9.66□□□□□ -0.86
SYNGAP1-204ENST00000449372 LINC00467Q9BRT7 94 aa9.66□□□□□ -0.86
SYNGAP1-204ENST00000449372 IGHV3-73A0A0B4J1V6 119 aa9.65□□□□□ -0.86
SYNGAP1-204ENST00000449372 UBE2L6O14933 153 aa9.65□□□□□ -0.86
SYNGAP1-204ENST00000449372 CSPG4Q6UVK1 2322 aa9.65□□□□□ -0.86
SYNGAP1-204ENST00000449372 CDKN2A-AS1Q9UH64 79 aa9.65□□□□□ -0.86
SYNGAP1-204ENST00000449372 CMC4P56277 68 aaPredicted RBP9.65□□□□□ -0.86
SYNGAP1-204ENST00000449372 Q96MF0 132 aa9.64□□□□□ -0.87
SYNGAP1-204ENST00000449372 TRBV10-1A0A0K0K1A3 114 aa9.64□□□□□ -0.87
SYNGAP1-204ENST00000449372 ABCA12Q86UK0 2595 aa9.64□□□□□ -0.87
SYNGAP1-204ENST00000449372 NCR3O14931 201 aa9.63□□□□□ -0.87
SYNGAP1-204ENST00000449372 CRPP02741 224 aa9.63□□□□□ -0.87
SYNGAP1-204ENST00000449372 LYPD5Q6UWN5 251 aa9.63□□□□□ -0.87
SYNGAP1-204ENST00000449372 FAM19A1Q7Z5A9 133 aa9.63□□□□□ -0.87
SYNGAP1-204ENST00000449372 A0A087WYN8 130 aa9.63□□□□□ -0.87
SYNGAP1-204ENST00000449372 OBSCN-AS1Q96MR7 158 aa9.63□□□□□ -0.87
SYNGAP1-204ENST00000449372 LINC00474Q9P2X8 69 aa9.63□□□□□ -0.87
SYNGAP1-204ENST00000449372 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.62□□□□□ -0.87
SYNGAP1-204ENST00000449372 IGKV2-29A2NJV5 120 aaPredicted RBP9.62□□□□□ -0.87
SYNGAP1-204ENST00000449372 ENHOQ6UWT2 76 aa9.62□□□□□ -0.87
SYNGAP1-204ENST00000449372 LINC00482Q8N8I6 264 aa9.62□□□□□ -0.87
SYNGAP1-204ENST00000449372 IGLV5-45A0A087WSX0 123 aa9.62□□□□□ -0.87
SYNGAP1-204ENST00000449372 S100A7L2Q5SY68 101 aa9.62□□□□□ -0.87
SYNGAP1-204ENST00000449372 CHD6Q8TD26 2715 aa9.61□□□□□ -0.87
SYNGAP1-204ENST00000449372 CHCHD7Q9BUK0 85 aa9.61□□□□□ -0.87
SYNGAP1-204ENST00000449372 PMAIP1Q13794 54 aa9.61□□□□□ -0.87
SYNGAP1-204ENST00000449372 ITPR3Q14573 2671 aa9.6□□□□□ -0.87
SYNGAP1-204ENST00000449372 KHDC1LQ5JSQ8 128 aa9.6□□□□□ -0.87
SYNGAP1-204ENST00000449372 H0YGX0 51 aa9.59□□□□□ -0.87
SYNGAP1-204ENST00000449372 ATP5EP2Q5VTU8 51 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms