RNA–Protein interactions for RNA: ENST00000449234.1

RFX3-208, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-208ENST00000449234 ACACBO00763 2458 aa8.1□□□□□ -1.11
RFX3-208ENST00000449234 USP9YO00507 2555 aaPredicted RBP8.1□□□□□ -1.11
RFX3-208ENST00000449234 CSMD1Q96PZ7 3565 aa8.09□□□□□ -1.11
RFX3-208ENST00000449234 IBA57-AS1B1ANH7 110 aa8.09□□□□□ -1.11
RFX3-208ENST00000449234 RPL28P46779 137 aaKnown RBP8.09□□□□□ -1.11
RFX3-208ENST00000449234 HIST2H2BCQ6DN03 193 aa8.09□□□□□ -1.11
RFX3-208ENST00000449234 HIST2H2BDQ6DRA6 164 aa8.09□□□□□ -1.11
RFX3-208ENST00000449234 C11orf44Q8N8P7 122 aa8.09□□□□□ -1.11
RFX3-208ENST00000449234 CREBBPQ92793 2442 aa8.08□□□□□ -1.12
RFX3-208ENST00000449234 A0A087WZ39 114 aa8.08□□□□□ -1.12
RFX3-208ENST00000449234 IGHV3OR16-9A0A0B4J2B5 98 aa8.08□□□□□ -1.12
RFX3-208ENST00000449234 SNCGO76070 127 aa8.08□□□□□ -1.12
RFX3-208ENST00000449234 GHRHP01286 108 aa8.08□□□□□ -1.12
RFX3-208ENST00000449234 RPL35AP18077 110 aaKnown RBP8.08□□□□□ -1.12
RFX3-208ENST00000449234 H0YGX0 51 aa8.07□□□□□ -1.12
RFX3-208ENST00000449234 NPC2P61916 151 aa8.07□□□□□ -1.12
RFX3-208ENST00000449234 GAGE2BQ13066 116 aa8.07□□□□□ -1.12
RFX3-208ENST00000449234 GAGE2EQ4V326 116 aa8.07□□□□□ -1.12
RFX3-208ENST00000449234 SOSTDC1Q6X4U4 206 aa8.07□□□□□ -1.12
RFX3-208ENST00000449234 GAGE2DQ9UEU5 116 aa8.07□□□□□ -1.12
RFX3-208ENST00000449234 UTP20O75691 2785 aaKnown RBP8.06□□□□□ -1.12
RFX3-208ENST00000449234 TEX49A0A1B0GTD5 131 aa8.06□□□□□ -1.12
RFX3-208ENST00000449234 CLEC2BQ92478 149 aa8.06□□□□□ -1.12
RFX3-208ENST00000449234 CELSR1Q9NYQ6 3014 aa8.06□□□□□ -1.12
RFX3-208ENST00000449234 MYO18BQ8IUG5 2567 aa8.06□□□□□ -1.12
RFX3-208ENST00000449234 NAV2Q8IVL1 2488 aa8.05□□□□□ -1.12
RFX3-208ENST00000449234 LYRM9A8MSI8 78 aa8.05□□□□□ -1.12
RFX3-208ENST00000449234 GAGE6Q13070 117 aa8.05□□□□□ -1.12
RFX3-208ENST00000449234 SS18Q15532 418 aa8.05□□□□□ -1.12
RFX3-208ENST00000449234 DAND5Q8N907 189 aa8.05□□□□□ -1.12
RFX3-208ENST00000449234 CHCHD5Q9BSY4 110 aa8.05□□□□□ -1.12
RFX3-208ENST00000449234 LOC100131303A0A0U1RQF7 123 aa8.04□□□□□ -1.12
RFX3-208ENST00000449234 LINC00959A0A1B0GUT2 108 aa8.04□□□□□ -1.12
RFX3-208ENST00000449234 J3QKU1 62 aa8.04□□□□□ -1.12
RFX3-208ENST00000449234 CRPP02741 224 aa8.04□□□□□ -1.12
RFX3-208ENST00000449234 LINC00482Q8N8I6 264 aa8.04□□□□□ -1.12
RFX3-208ENST00000449234 IMUPQ9GZP8 106 aa8.04□□□□□ -1.12
RFX3-208ENST00000449234 PRO0255Q9UI72 69 aa8.04□□□□□ -1.12
RFX3-208ENST00000449234 ZNF462Q96JM2 2506 aa8.04□□□□□ -1.12
RFX3-208ENST00000449234 FBN2P35556 2912 aa8.03□□□□□ -1.12
RFX3-208ENST00000449234 C9orf66Q5T8R8 295 aa8.03□□□□□ -1.12
RFX3-208ENST00000449234 C15orf53Q8NAA6 179 aa8.03□□□□□ -1.12
RFX3-208ENST00000449234 IGLV4-60A0A075B6I1 120 aa8.02□□□□□ -1.13
RFX3-208ENST00000449234 BAALC-AS2P0C853 105 aa8.02□□□□□ -1.13
RFX3-208ENST00000449234 INAFM2P0DMQ5 153 aa8.02□□□□□ -1.13
RFX3-208ENST00000449234 LINC00158P58513 81 aa8.02□□□□□ -1.13
RFX3-208ENST00000449234 Q8IZM0 81 aa8.02□□□□□ -1.13
RFX3-208ENST00000449234 MIR7-3HGQ8N6C7 128 aa8.02□□□□□ -1.13
RFX3-208ENST00000449234 MUC7Q8TAX7 377 aa8.02□□□□□ -1.13
RFX3-208ENST00000449234 SND1-IT1Q9HBX3 110 aa8.02□□□□□ -1.13
RFX3-208ENST00000449234 FAM208BQ5VWN6 2430 aa8.02□□□□□ -1.13
RFX3-208ENST00000449234 MXRA5Q9NR99 2828 aa8.02□□□□□ -1.13
RFX3-208ENST00000449234 PTPN13Q12923 2485 aa8.01□□□□□ -1.13
RFX3-208ENST00000449234 A0A1B0GX51 115 aa8.01□□□□□ -1.13
RFX3-208ENST00000449234 CXCL5P42830 114 aa8.01□□□□□ -1.13
RFX3-208ENST00000449234 TTC32Q5I0X7 151 aa8.01□□□□□ -1.13
RFX3-208ENST00000449234 WFDC10AQ9H1F0 79 aa8.01□□□□□ -1.13
RFX3-208ENST00000449234 TEX15Q9BXT5 2789 aa8□□□□□ -1.13
RFX3-208ENST00000449234 A0A0U1RRA0 63 aa8□□□□□ -1.13
RFX3-208ENST00000449234 GYPEP15421 78 aa8□□□□□ -1.13
RFX3-208ENST00000449234 CCL18P55774 89 aa8□□□□□ -1.13
RFX3-208ENST00000449234 COX17Q14061 63 aa8□□□□□ -1.13
RFX3-208ENST00000449234 C6orf226Q5I0X4 101 aa8□□□□□ -1.13
RFX3-208ENST00000449234 X6R8D5 127 aa8□□□□□ -1.13
RFX3-208ENST00000449234 CELSR2Q9HCU4 2923 aa8□□□□□ -1.13
RFX3-208ENST00000449234 COL12A1Q99715 3063 aa8□□□□□ -1.13
RFX3-208ENST00000449234 USP24Q9UPU5 2620 aa7.99□□□□□ -1.13
RFX3-208ENST00000449234 TRBV7-7A0A0K0K1E9 115 aa7.99□□□□□ -1.13
RFX3-208ENST00000449234 CRLF1O75462 422 aa7.99□□□□□ -1.13
RFX3-208ENST00000449234 PLA2G2AP14555 144 aa7.99□□□□□ -1.13
RFX3-208ENST00000449234 ANAPC13Q9BS18 74 aa7.99□□□□□ -1.13
RFX3-208ENST00000449234 TOMM7Q9P0U1 55 aa7.99□□□□□ -1.13
RFX3-208ENST00000449234 IGKV2-28A0A075B6P5 120 aa7.98□□□□□ -1.13
RFX3-208ENST00000449234 NDUFC2O95298 119 aa7.98□□□□□ -1.13
RFX3-208ENST00000449234 IGKV2D-28P01615 120 aa7.98□□□□□ -1.13
RFX3-208ENST00000449234 APOC4P55056 127 aa7.98□□□□□ -1.13
RFX3-208ENST00000449234 SDIM1Q6ZPB5 146 aa7.98□□□□□ -1.13
RFX3-208ENST00000449234 LINC00643Q86TS7 51 aa7.98□□□□□ -1.13
RFX3-208ENST00000449234 PAX4O43316 350 aa7.97□□□□□ -1.13
RFX3-208ENST00000449234 LY6G6DO95868 133 aa7.97□□□□□ -1.13
RFX3-208ENST00000449234 DEFB130BP0DP73 79 aa7.97□□□□□ -1.13
RFX3-208ENST00000449234 DEFB130AP0DP74 79 aa7.97□□□□□ -1.13
RFX3-208ENST00000449234 MALP21145 153 aa7.97□□□□□ -1.13
RFX3-208ENST00000449234 NDUFV3P56181 108 aaKnown RBP7.97□□□□□ -1.13
RFX3-208ENST00000449234 CD164L2Q6UWJ8 174 aa7.97□□□□□ -1.13
RFX3-208ENST00000449234 LINC00337Q8N6G1 96 aa7.97□□□□□ -1.13
RFX3-208ENST00000449234 LRRK2Q5S007 2527 aa7.96□□□□□ -1.13
RFX3-208ENST00000449234 IGHV4-28A0A0C4DH34 117 aa7.96□□□□□ -1.14
RFX3-208ENST00000449234 KRTAP10-3P60369 221 aa7.96□□□□□ -1.14
RFX3-208ENST00000449234 C5orf38Q86SI9 138 aa7.96□□□□□ -1.14
RFX3-208ENST00000449234 Q8N3U1 123 aa7.96□□□□□ -1.14
RFX3-208ENST00000449234 SMIM11BQ8TCY0 68 aa7.96□□□□□ -1.14
RFX3-208ENST00000449234 POLQO75417 2590 aa7.96□□□□□ -1.14
RFX3-208ENST00000449234 DNAL4O96015 105 aa7.95□□□□□ -1.14
RFX3-208ENST00000449234 ZANQ9Y493 2812 aa7.95□□□□□ -1.14
RFX3-208ENST00000449234 ATP5G1P05496 136 aa7.94□□□□□ -1.14
RFX3-208ENST00000449234 MIFP14174 115 aa7.94□□□□□ -1.14
RFX3-208ENST00000449234 XP32Q5T750 250 aa7.94□□□□□ -1.14
RFX3-208ENST00000449234 OBSCN-AS1Q96MR7 158 aa7.94□□□□□ -1.14
RFX3-208ENST00000449234 SVEP1Q4LDE5 3571 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms