RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 FBN1P35555 2871 aaKnown RBP7.37□□□□□ -1.23
VIPAS39-203ENST00000448935 A0A1B0GUV1 79 aa7.37□□□□□ -1.23
VIPAS39-203ENST00000448935 SRSF9Q13242 221 aaKnown RBP eCLIP7.37□□□□□ -1.23
VIPAS39-203ENST00000448935 ICOSQ9Y6W8 199 aa7.37□□□□□ -1.23
VIPAS39-203ENST00000448935 TRAV13-1A0A0B4J241 112 aa7.36□□□□□ -1.23
VIPAS39-203ENST00000448935 A0A0J9YY99 117 aa7.36□□□□□ -1.23
VIPAS39-203ENST00000448935 TAX1BP3O14907 124 aa7.36□□□□□ -1.23
VIPAS39-203ENST00000448935 SMIM13P0DJ93 91 aa7.36□□□□□ -1.23
VIPAS39-203ENST00000448935 TSPEAR-AS2P59090 65 aa7.36□□□□□ -1.23
VIPAS39-203ENST00000448935 CDKN2A-AS1Q9UH64 79 aa7.36□□□□□ -1.23
VIPAS39-203ENST00000448935 IGHV3-64A0A075B6Q5 118 aa7.35□□□□□ -1.23
VIPAS39-203ENST00000448935 H3BNG1 76 aa7.35□□□□□ -1.23
VIPAS39-203ENST00000448935 HTN3P15516 51 aa7.35□□□□□ -1.23
VIPAS39-203ENST00000448935 TMEM238C9JI98 176 aa7.34□□□□□ -1.23
VIPAS39-203ENST00000448935 TMEM262E9PQX1 116 aa7.34□□□□□ -1.23
VIPAS39-203ENST00000448935 CCL25O15444 150 aa7.34□□□□□ -1.23
VIPAS39-203ENST00000448935 SPINK8P0C7L1 97 aa7.34□□□□□ -1.23
VIPAS39-203ENST00000448935 FXYD2P54710 66 aa7.34□□□□□ -1.24
VIPAS39-203ENST00000448935 C12orf74Q32Q52 190 aa7.34□□□□□ -1.24
VIPAS39-203ENST00000448935 ZFAND6Q6FIF0 208 aa7.34□□□□□ -1.24
VIPAS39-203ENST00000448935 RETNQ9HD89 108 aa7.34□□□□□ -1.24
VIPAS39-203ENST00000448935 NDUFA12Q9UI09 145 aa7.34□□□□□ -1.24
VIPAS39-203ENST00000448935 IGLV4-60A0A075B6I1 120 aa7.33□□□□□ -1.24
VIPAS39-203ENST00000448935 TRAV8-3A0A0A6YYJ7 113 aa7.33□□□□□ -1.24
VIPAS39-203ENST00000448935 COX6A2Q02221 97 aa7.33□□□□□ -1.24
VIPAS39-203ENST00000448935 NHP2Q9NX24 153 aaKnown RBP7.33□□□□□ -1.24
VIPAS39-203ENST00000448935 A0A096LPF7 62 aa7.32□□□□□ -1.24
VIPAS39-203ENST00000448935 IGLV5-39A0A0G2JS06 123 aa7.32□□□□□ -1.24
VIPAS39-203ENST00000448935 RBX1P62877 108 aa7.32□□□□□ -1.24
VIPAS39-203ENST00000448935 SS18Q15532 418 aa7.32□□□□□ -1.24
VIPAS39-203ENST00000448935 LELP1Q5T871 98 aa7.32□□□□□ -1.24
VIPAS39-203ENST00000448935 Q6ZVH6 145 aa7.32□□□□□ -1.24
VIPAS39-203ENST00000448935 A0A0J9YXY3 114 aa7.31□□□□□ -1.24
VIPAS39-203ENST00000448935 SMIM1B2RUZ4 78 aa7.31□□□□□ -1.24
VIPAS39-203ENST00000448935 NDUFA1O15239 70 aa7.31□□□□□ -1.24
VIPAS39-203ENST00000448935 TRIAP1O43715 76 aa7.31□□□□□ -1.24
VIPAS39-203ENST00000448935 KPRPQ5T749 579 aaPredicted RBP7.31□□□□□ -1.24
VIPAS39-203ENST00000448935 LINC00959A0A1B0GUT2 108 aa7.3□□□□□ -1.24
VIPAS39-203ENST00000448935 A0A1B0GWB2 263 aa7.3□□□□□ -1.24
VIPAS39-203ENST00000448935 TIMM17BO60830 172 aa7.3□□□□□ -1.24
VIPAS39-203ENST00000448935 CIRBPQ14011 172 aaKnown RBP7.3□□□□□ -1.24
VIPAS39-203ENST00000448935 VAMP3Q15836 100 aa7.3□□□□□ -1.24
VIPAS39-203ENST00000448935 C10orf126Q8N4M7 172 aa7.3□□□□□ -1.24
VIPAS39-203ENST00000448935 IGKV3OR2-268A0A0C4DH90 116 aa7.3□□□□□ -1.24
VIPAS39-203ENST00000448935 A0A0J9YWU9 116 aa7.3□□□□□ -1.24
VIPAS39-203ENST00000448935 IGHV3-30P01768 117 aa7.3□□□□□ -1.24
VIPAS39-203ENST00000448935 IGHV3-30-5P0DP03 117 aa7.3□□□□□ -1.24
VIPAS39-203ENST00000448935 HERV-K104P63124 156 aa7.3□□□□□ -1.24
VIPAS39-203ENST00000448935 RPL24P83731 157 aaKnown RBP7.3□□□□□ -1.24
VIPAS39-203ENST00000448935 C11orf45Q8TAV5 145 aa7.3□□□□□ -1.24
VIPAS39-203ENST00000448935 SFTA2Q6UW10 78 aa7.29□□□□□ -1.24
VIPAS39-203ENST00000448935 LINC01561Q8N1V8 128 aa7.29□□□□□ -1.24
VIPAS39-203ENST00000448935 RAB37Q96AX2 223 aa7.29□□□□□ -1.24
VIPAS39-203ENST00000448935 TM2D3Q9BRN9 247 aa7.29□□□□□ -1.24
VIPAS39-203ENST00000448935 SPANXDQ9BXN6 97 aa7.29□□□□□ -1.24
VIPAS39-203ENST00000448935 SPANXCQ9NY87 97 aa7.29□□□□□ -1.24
VIPAS39-203ENST00000448935 A0A087WZ39 114 aa7.28□□□□□ -1.24
VIPAS39-203ENST00000448935 IGHV3OR16-9A0A0B4J2B5 98 aa7.28□□□□□ -1.24
VIPAS39-203ENST00000448935 K7EP13 123 aa7.28□□□□□ -1.24
VIPAS39-203ENST00000448935 PCP4P48539 62 aa7.28□□□□□ -1.24
VIPAS39-203ENST00000448935 UBE2V1Q13404 147 aa7.28□□□□□ -1.24
VIPAS39-203ENST00000448935 DEFB121Q5J5C9 76 aa7.28□□□□□ -1.24
VIPAS39-203ENST00000448935 Q6ZTC4 211 aa7.28□□□□□ -1.24
VIPAS39-203ENST00000448935 COPS9Q8WXC6 57 aa7.28□□□□□ -1.24
VIPAS39-203ENST00000448935 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.28□□□□□ -1.24
VIPAS39-203ENST00000448935 TRRAPQ9Y4A5 3859 aa7.28□□□□□ -1.24
VIPAS39-203ENST00000448935 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.27□□□□□ -1.25
VIPAS39-203ENST00000448935 H3BUT2 72 aa7.27□□□□□ -1.25
VIPAS39-203ENST00000448935 K7EIL1 84 aa7.27□□□□□ -1.25
VIPAS39-203ENST00000448935 ANGP03950 147 aaKnown RBP7.27□□□□□ -1.25
VIPAS39-203ENST00000448935 GTF2H5Q6ZYL4 71 aa7.27□□□□□ -1.25
VIPAS39-203ENST00000448935 DEFB131BA0A096LNP1 70 aa7.27□□□□□ -1.25
VIPAS39-203ENST00000448935 GAGE10A6NGK3 116 aa7.27□□□□□ -1.25
VIPAS39-203ENST00000448935 IFITM1P13164 125 aa7.27□□□□□ -1.25
VIPAS39-203ENST00000448935 LYPD5Q6UWN5 251 aa7.27□□□□□ -1.25
VIPAS39-203ENST00000448935 COX7B2Q8TF08 81 aa7.27□□□□□ -1.25
VIPAS39-203ENST00000448935 Q9H8V8 135 aa7.27□□□□□ -1.25
VIPAS39-203ENST00000448935 NBEAL2Q6ZNJ1 2754 aa7.26□□□□□ -1.25
VIPAS39-203ENST00000448935 A0A1W2PPM0 123 aa7.26□□□□□ -1.25
VIPAS39-203ENST00000448935 K7ERJ3 54 aa7.26□□□□□ -1.25
VIPAS39-203ENST00000448935 FABP2P12104 132 aa7.26□□□□□ -1.25
VIPAS39-203ENST00000448935 MIAQ16674 131 aa7.26□□□□□ -1.25
VIPAS39-203ENST00000448935 TRAV10A0A0B4J240 114 aa7.25□□□□□ -1.25
VIPAS39-203ENST00000448935 IGLL5B9A064 214 aa7.25□□□□□ -1.25
VIPAS39-203ENST00000448935 NANOS2P60321 138 aaKnown RBP7.25□□□□□ -1.25
VIPAS39-203ENST00000448935 REG3AQ06141 175 aa7.25□□□□□ -1.25
VIPAS39-203ENST00000448935 CD164L2Q6UWJ8 174 aa7.25□□□□□ -1.25
VIPAS39-203ENST00000448935 MUSTN1Q8IVN3 82 aa7.25□□□□□ -1.25
VIPAS39-203ENST00000448935 LINC00269Q8N2A0 174 aa7.25□□□□□ -1.25
VIPAS39-203ENST00000448935 ZNF625Q96I27 306 aaPredicted RBP7.25□□□□□ -1.25
VIPAS39-203ENST00000448935 LITAFQ99732 161 aa7.25□□□□□ -1.25
VIPAS39-203ENST00000448935 PRB2P02812 416 aaPredicted RBP7.24□□□□□ -1.25
VIPAS39-203ENST00000448935 PRSS2P07478 247 aa7.24□□□□□ -1.25
VIPAS39-203ENST00000448935 XCL1P47992 114 aa7.24□□□□□ -1.25
VIPAS39-203ENST00000448935 A0A0B4J2C4 111 aa7.23□□□□□ -1.25
VIPAS39-203ENST00000448935 A4D1N5 150 aa7.23□□□□□ -1.25
VIPAS39-203ENST00000448935 APOMO95445 188 aa7.23□□□□□ -1.25
VIPAS39-203ENST00000448935 MEIG1Q5JSS6 88 aa7.23□□□□□ -1.25
VIPAS39-203ENST00000448935 LYRM7Q5U5X0 104 aa7.23□□□□□ -1.25
VIPAS39-203ENST00000448935 C5orf38Q86SI9 138 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms