RNA–Protein interactions for RNA: ENST00000448885.5

PCDH15-219, Transcript of protocadherin related 15, humanhuman

TSL 5

Gene PCDH15, Length 6,937 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-219ENST00000448885 CNTRLQ7Z7A1 2325 aa4.43□□□□□ -1.7
PCDH15-219ENST00000448885 PRM2P04554 102 aa4.43□□□□□ -1.7
PCDH15-219ENST00000448885 OBSL1O75147 1896 aa4.43□□□□□ -1.7
PCDH15-219ENST00000448885 SBSPONQ8IVN8 264 aa4.42□□□□□ -1.7
PCDH15-219ENST00000448885 TRIOBPQ9H2D6 2365 aa4.42□□□□□ -1.7
PCDH15-219ENST00000448885 MDC1Q14676 2089 aaKnown RBP4.42□□□□□ -1.7
PCDH15-219ENST00000448885 PSPHP1O15172 72 aa4.42□□□□□ -1.7
PCDH15-219ENST00000448885 PLXNB3Q9ULL4 1909 aa4.42□□□□□ -1.7
PCDH15-219ENST00000448885 CRIP2P52943 208 aaPredicted RBP4.42□□□□□ -1.7
PCDH15-219ENST00000448885 A0A087WSZ3 146 aa4.42□□□□□ -1.7
PCDH15-219ENST00000448885 IGLV1-51P01701 117 aa4.41□□□□□ -1.7
PCDH15-219ENST00000448885 A0A087WVE0 104 aa4.41□□□□□ -1.7
PCDH15-219ENST00000448885 HEATR5AQ86XA9 2040 aa4.41□□□□□ -1.7
PCDH15-219ENST00000448885 IGLV4-60A0A075B6I1 120 aa4.41□□□□□ -1.7
PCDH15-219ENST00000448885 Q8N3U1 123 aa4.41□□□□□ -1.7
PCDH15-219ENST00000448885 GAS8-AS1O95177 125 aa4.41□□□□□ -1.7
PCDH15-219ENST00000448885 ODF3L2Q3SX64 289 aa4.41□□□□□ -1.7
PCDH15-219ENST00000448885 ARID1AO14497 2285 aa4.41□□□□□ -1.7
PCDH15-219ENST00000448885 Q6ZTC4 211 aa4.41□□□□□ -1.7
PCDH15-219ENST00000448885 Q8N2B8 174 aa4.41□□□□□ -1.7
PCDH15-219ENST00000448885 BRI3O95415 125 aa4.4□□□□□ -1.7
PCDH15-219ENST00000448885 NHLRC4P0CG21 123 aaPredicted RBP4.4□□□□□ -1.7
PCDH15-219ENST00000448885 CXCL6P80162 114 aa4.4□□□□□ -1.7
PCDH15-219ENST00000448885 LYPD5Q6UWN5 251 aa4.4□□□□□ -1.7
PCDH15-219ENST00000448885 AMELXQ99217 191 aa4.4□□□□□ -1.7
PCDH15-219ENST00000448885 C1orf64Q8NEQ6 169 aa4.4□□□□□ -1.71
PCDH15-219ENST00000448885 EML6Q6ZMW3 1958 aa4.4□□□□□ -1.71
PCDH15-219ENST00000448885 PRR3P79522 188 aaKnown RBP4.4□□□□□ -1.71
PCDH15-219ENST00000448885 PRLHP81277 87 aa4.4□□□□□ -1.71
PCDH15-219ENST00000448885 EDN2P20800 178 aa4.4□□□□□ -1.71
PCDH15-219ENST00000448885 A0A1B0GU69 56 aa4.39□□□□□ -1.71
PCDH15-219ENST00000448885 A0A1B0GUV1 79 aa4.39□□□□□ -1.71
PCDH15-219ENST00000448885 ASCC3Q8N3C0 2202 aaKnown RBP4.39□□□□□ -1.71
PCDH15-219ENST00000448885 TSPEAR-AS2P59090 65 aa4.39□□□□□ -1.71
PCDH15-219ENST00000448885 ANAPC1Q9H1A4 1944 aa4.39□□□□□ -1.71
PCDH15-219ENST00000448885 DEFB116Q30KQ4 102 aa4.39□□□□□ -1.71
PCDH15-219ENST00000448885 TMEM254Q8TBM7 123 aa4.39□□□□□ -1.71
PCDH15-219ENST00000448885 TP53AIP1Q9HCN2 124 aa4.39□□□□□ -1.71
PCDH15-219ENST00000448885 TP53BP1Q12888 1972 aaPredicted RBP4.39□□□□□ -1.71
PCDH15-219ENST00000448885 SPTBP11277 2137 aa4.39□□□□□ -1.71
PCDH15-219ENST00000448885 ATG2AQ2TAZ0 1938 aa4.39□□□□□ -1.71
PCDH15-219ENST00000448885 ACYP2P14621 99 aa4.38□□□□□ -1.71
PCDH15-219ENST00000448885 SMCR5Q8TEV8 140 aa4.38□□□□□ -1.71
PCDH15-219ENST00000448885 ZNF580Q9UK33 172 aa4.38□□□□□ -1.71
PCDH15-219ENST00000448885 ADAMTSL4-AS1Q5T5F5 129 aa4.38□□□□□ -1.71
PCDH15-219ENST00000448885 KNL1Q8NG31 2342 aa4.38□□□□□ -1.71
PCDH15-219ENST00000448885 IGKV2D-30A0A075B6S6 120 aa4.38□□□□□ -1.71
PCDH15-219ENST00000448885 IGKV2-30P06310 120 aa4.38□□□□□ -1.71
PCDH15-219ENST00000448885 CEP290O15078 2479 aa4.38□□□□□ -1.71
PCDH15-219ENST00000448885 NUP210LQ5VU65 1888 aa4.38□□□□□ -1.71
PCDH15-219ENST00000448885 C22orf24Q9Y442 160 aa4.37□□□□□ -1.71
PCDH15-219ENST00000448885 Q6ZRU5 148 aa4.37□□□□□ -1.71
PCDH15-219ENST00000448885 SMR3AQ99954 134 aa4.37□□□□□ -1.71
PCDH15-219ENST00000448885 ZNF106Q9H2Y7 1883 aaKnown RBP4.37□□□□□ -1.71
PCDH15-219ENST00000448885 ASXL3Q9C0F0 2248 aa4.37□□□□□ -1.71
PCDH15-219ENST00000448885 SMIM29Q86T20 159 aa4.37□□□□□ -1.71
PCDH15-219ENST00000448885 KIAA1549LQ6ZVL6 1849 aa4.36□□□□□ -1.71
PCDH15-219ENST00000448885 SPAG11AQ6PDA7 123 aa4.36□□□□□ -1.71
PCDH15-219ENST00000448885 PHF3Q92576 2039 aaKnown RBP4.36□□□□□ -1.71
PCDH15-219ENST00000448885 ADAMTS9Q9P2N4 1935 aa4.36□□□□□ -1.71
PCDH15-219ENST00000448885 AVPP01185 164 aa4.35□□□□□ -1.71
PCDH15-219ENST00000448885 PLA2G1BP04054 148 aaKnown RBP4.35□□□□□ -1.71
PCDH15-219ENST00000448885 Q6ZSN1 163 aa4.35□□□□□ -1.71
PCDH15-219ENST00000448885 C6orf48Q9UBA6 75 aa4.35□□□□□ -1.71
PCDH15-219ENST00000448885 DENND4CQ5VZ89 1909 aa4.35□□□□□ -1.71
PCDH15-219ENST00000448885 COX8CQ7Z4L0 72 aa4.35□□□□□ -1.71
PCDH15-219ENST00000448885 URB1-AS1Q96HZ7 61 aa4.35□□□□□ -1.71
PCDH15-219ENST00000448885 CFAP54Q96N23 3096 aa4.35□□□□□ -1.71
PCDH15-219ENST00000448885 FHL3Q13643 280 aa4.34□□□□□ -1.71
PCDH15-219ENST00000448885 KIAA0087Q14695 138 aa4.34□□□□□ -1.71
PCDH15-219ENST00000448885 SERTAD4-AS1Q5TG53 156 aa4.34□□□□□ -1.71
PCDH15-219ENST00000448885 H3BPC8 53 aa4.34□□□□□ -1.72
PCDH15-219ENST00000448885 MDFIQ99750 246 aa4.34□□□□□ -1.72
PCDH15-219ENST00000448885 SPACA4Q8TDM5 124 aa4.33□□□□□ -1.72
PCDH15-219ENST00000448885 EP300Q09472 2414 aaPredicted RBP4.33□□□□□ -1.72
PCDH15-219ENST00000448885 A0A1B0GW54 56 aa4.33□□□□□ -1.72
PCDH15-219ENST00000448885 Q8NBF4 154 aa4.33□□□□□ -1.72
PCDH15-219ENST00000448885 LINC00846Q9NV44 126 aa4.33□□□□□ -1.72
PCDH15-219ENST00000448885 DNAH12Q6ZR08 3092 aa4.33□□□□□ -1.72
PCDH15-219ENST00000448885 ARHGEF17Q96PE2 2063 aaPredicted RBP4.33□□□□□ -1.72
PCDH15-219ENST00000448885 ZDBF2Q9HCK1 2354 aa4.33□□□□□ -1.72
PCDH15-219ENST00000448885 DYSFO75923 2080 aa4.33□□□□□ -1.72
PCDH15-219ENST00000448885 MOBPQ13875 183 aa4.33□□□□□ -1.72
PCDH15-219ENST00000448885 BCE1O60756 84 aa4.33□□□□□ -1.72
PCDH15-219ENST00000448885 Q9UF83 564 aa4.33□□□□□ -1.72
PCDH15-219ENST00000448885 FAM229AH3BQW9 127 aa4.32□□□□□ -1.72
PCDH15-219ENST00000448885 SMG1Q96Q15 3661 aaKnown RBP4.32□□□□□ -1.72
PCDH15-219ENST00000448885 SPATA3Q8NHX4 192 aa4.32□□□□□ -1.72
PCDH15-219ENST00000448885 RIF1Q5UIP0 2472 aaKnown RBP4.32□□□□□ -1.72
PCDH15-219ENST00000448885 LINC01546A6NGU7 62 aa4.32□□□□□ -1.72
PCDH15-219ENST00000448885 PTPRSQ13332 1948 aa4.32□□□□□ -1.72
PCDH15-219ENST00000448885 LINC00313P59037 77 aa4.32□□□□□ -1.72
PCDH15-219ENST00000448885 C11orf72Q8NBR9 251 aa4.32□□□□□ -1.72
PCDH15-219ENST00000448885 NCOR1O75376 2440 aa4.31□□□□□ -1.72
PCDH15-219ENST00000448885 SPINT4Q6UDR6 99 aa4.31□□□□□ -1.72
PCDH15-219ENST00000448885 SNRNP200O75643 2136 aaKnown RBP4.31□□□□□ -1.72
PCDH15-219ENST00000448885 ALPK3Q96L96 1907 aa4.31□□□□□ -1.72
PCDH15-219ENST00000448885 A8MTW9 85 aa4.31□□□□□ -1.72
PCDH15-219ENST00000448885 PRO0628Q9UI54 55 aa4.31□□□□□ -1.72
PCDH15-219ENST00000448885 KRTAP10-9P60411 292 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms