RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 SMIM20Q8N5G0 67 aa10.51□□□□□ -0.73
SF1-211ENST00000448404 GAGE2BQ13066 116 aa10.5□□□□□ -0.73
SF1-211ENST00000448404 GAGE2EQ4V326 116 aa10.5□□□□□ -0.73
SF1-211ENST00000448404 EDA2RQ9HAV5 297 aa10.5□□□□□ -0.73
SF1-211ENST00000448404 GAGE2DQ9UEU5 116 aa10.5□□□□□ -0.73
SF1-211ENST00000448404 NDUFA12Q9UI09 145 aa10.5□□□□□ -0.73
SF1-211ENST00000448404 CITED1Q99966 193 aa10.5□□□□□ -0.73
SF1-211ENST00000448404 C9JAW5 83 aa10.49□□□□□ -0.73
SF1-211ENST00000448404 RPL36AP83881 106 aaKnown RBP10.49□□□□□ -0.73
SF1-211ENST00000448404 RPL36ALQ969Q0 106 aaKnown RBP10.49□□□□□ -0.73
SF1-211ENST00000448404 TMEM262E9PQX1 116 aa10.49□□□□□ -0.73
SF1-211ENST00000448404 NDUFV3P56181 108 aaKnown RBP10.49□□□□□ -0.73
SF1-211ENST00000448404 LYRM7Q5U5X0 104 aa10.49□□□□□ -0.73
SF1-211ENST00000448404 SNCGO76070 127 aa10.48□□□□□ -0.73
SF1-211ENST00000448404 TRGV4A0A0C4DH28 118 aa10.48□□□□□ -0.73
SF1-211ENST00000448404 SLC25A20O43772 301 aa10.48□□□□□ -0.73
SF1-211ENST00000448404 TTC32Q5I0X7 151 aa10.48□□□□□ -0.73
SF1-211ENST00000448404 VSIG2Q96IQ7 327 aa10.48□□□□□ -0.73
SF1-211ENST00000448404 LITAFQ99732 161 aa10.48□□□□□ -0.73
SF1-211ENST00000448404 SPANXA1Q9NS26 97 aa10.48□□□□□ -0.73
SF1-211ENST00000448404 IGHV1-58A0A0C4DH39 117 aa10.48□□□□□ -0.73
SF1-211ENST00000448404 LINC00242Q5T6M2 205 aa10.48□□□□□ -0.73
SF1-211ENST00000448404 SBSPONQ8IVN8 264 aa10.47□□□□□ -0.73
SF1-211ENST00000448404 TMEM101Q96IK0 257 aa10.47□□□□□ -0.73
SF1-211ENST00000448404 MAST4O15021 2626 aa10.46□□□□□ -0.73
SF1-211ENST00000448404 TINCRA0A1B0GVN0 87 aa10.46□□□□□ -0.74
SF1-211ENST00000448404 PIK3CD-AS1Q5SR53 167 aa10.46□□□□□ -0.74
SF1-211ENST00000448404 DNAJC30Q96LL9 226 aa10.46□□□□□ -0.74
SF1-211ENST00000448404 NOTCH1P46531 2555 aa10.46□□□□□ -0.74
SF1-211ENST00000448404 FBN1P35555 2871 aaKnown RBP10.45□□□□□ -0.74
SF1-211ENST00000448404 PRO1854Q9UHT4 67 aa10.45□□□□□ -0.74
SF1-211ENST00000448404 NTN5Q8WTR8 489 aaPredicted RBP10.45□□□□□ -0.74
SF1-211ENST00000448404 IGLV4-60A0A075B6I1 120 aa10.44□□□□□ -0.74
SF1-211ENST00000448404 IFITM1P13164 125 aa10.44□□□□□ -0.74
SF1-211ENST00000448404 C16orf74Q96GX8 76 aa10.44□□□□□ -0.74
SF1-211ENST00000448404 Q1RN00 199 aa10.44□□□□□ -0.74
SF1-211ENST00000448404 DEFB135Q30KP9 77 aa10.44□□□□□ -0.74
SF1-211ENST00000448404 CLPSL2Q6UWE3 100 aa10.44□□□□□ -0.74
SF1-211ENST00000448404 ANK2Q01484 3957 aa10.44□□□□□ -0.74
SF1-211ENST00000448404 DAZ2Q13117 558 aaKnown RBP10.43□□□□□ -0.74
SF1-211ENST00000448404 FHL2Q14192 279 aa10.43□□□□□ -0.74
SF1-211ENST00000448404 Q9H8V8 135 aa10.43□□□□□ -0.74
SF1-211ENST00000448404 TEX49A0A1B0GTD5 131 aa10.43□□□□□ -0.74
SF1-211ENST00000448404 Q8N3U1 123 aa10.43□□□□□ -0.74
SF1-211ENST00000448404 FAM110AQ9BQ89 295 aa10.42□□□□□ -0.74
SF1-211ENST00000448404 IGHV3-33P01772 117 aa10.42□□□□□ -0.74
SF1-211ENST00000448404 C3orf56Q8N813 242 aa10.42□□□□□ -0.74
SF1-211ENST00000448404 CDC42SE2Q9NRR3 84 aa10.42□□□□□ -0.74
SF1-211ENST00000448404 UBE2L6O14933 153 aa10.41□□□□□ -0.74
SF1-211ENST00000448404 CHCHD5Q9BSY4 110 aa10.41□□□□□ -0.74
SF1-211ENST00000448404 C11orf68Q9H3H3 251 aaKnown RBP10.4□□□□□ -0.74
SF1-211ENST00000448404 TOMM7Q9P0U1 55 aa10.4□□□□□ -0.74
SF1-211ENST00000448404 SMIM1B2RUZ4 78 aa10.4□□□□□ -0.74
SF1-211ENST00000448404 DAZ4Q86SG3 579 aaKnown RBP10.4□□□□□ -0.74
SF1-211ENST00000448404 C15orf53Q8NAA6 179 aa10.4□□□□□ -0.74
SF1-211ENST00000448404 TMEM243Q9BU79 118 aa10.4□□□□□ -0.74
SF1-211ENST00000448404 DAZ3Q9NR90 486 aaKnown RBP10.4□□□□□ -0.74
SF1-211ENST00000448404 TRBV10-1A0A0K0K1A3 114 aa10.39□□□□□ -0.75
SF1-211ENST00000448404 TENM3Q9P273 2699 aa10.39□□□□□ -0.75
SF1-211ENST00000448404 X6R8D5 127 aa10.39□□□□□ -0.75
SF1-211ENST00000448404 TRAV8-4A0A0B4J246 113 aa10.37□□□□□ -0.75
SF1-211ENST00000448404 GYPEP15421 78 aa10.37□□□□□ -0.75
SF1-211ENST00000448404 MEIG1Q5JSS6 88 aa10.37□□□□□ -0.75
SF1-211ENST00000448404 FAM222AQ5U5X8 452 aa10.37□□□□□ -0.75
SF1-211ENST00000448404 SOSTDC1Q6X4U4 206 aa10.37□□□□□ -0.75
SF1-211ENST00000448404 C5orf38Q86SI9 138 aa10.37□□□□□ -0.75
SF1-211ENST00000448404 OVOL2Q9BRP0 275 aa10.37□□□□□ -0.75
SF1-211ENST00000448404 TRIAP1O43715 76 aa10.37□□□□□ -0.75
SF1-211ENST00000448404 PRIMA1Q86XR5 153 aa10.36□□□□□ -0.75
SF1-211ENST00000448404 CLEC2BQ92478 149 aa10.36□□□□□ -0.75
SF1-211ENST00000448404 F5H768 121 aa10.36□□□□□ -0.75
SF1-211ENST00000448404 MIAQ16674 131 aa10.36□□□□□ -0.75
SF1-211ENST00000448404 LINC01620Q4KN68 170 aa10.36□□□□□ -0.75
SF1-211ENST00000448404 TRBV6-4A0A1B0GX49 114 aa10.35□□□□□ -0.75
SF1-211ENST00000448404 HTN3P15516 51 aa10.35□□□□□ -0.75
SF1-211ENST00000448404 TIRAPP58753 221 aa10.35□□□□□ -0.75
SF1-211ENST00000448404 COL6A5A8TX70 2615 aa10.35□□□□□ -0.75
SF1-211ENST00000448404 IGLV5-45A0A087WSX0 123 aa10.35□□□□□ -0.75
SF1-211ENST00000448404 TRBV6-8A0A0A6YYG3 113 aa10.35□□□□□ -0.75
SF1-211ENST00000448404 HERVK_113P63121 156 aa10.35□□□□□ -0.75
SF1-211ENST00000448404 CELA1Q9UNI1 258 aa10.34□□□□□ -0.75
SF1-211ENST00000448404 IGLV5-39A0A0G2JS06 123 aa10.33□□□□□ -0.76
SF1-211ENST00000448404 ATXN8Q156A1 80 aa10.33□□□□□ -0.76
SF1-211ENST00000448404 CMC4P56277 68 aaPredicted RBP10.33□□□□□ -0.76
SF1-211ENST00000448404 NDUFA1O15239 70 aa10.32□□□□□ -0.76
SF1-211ENST00000448404 XCL1P47992 114 aa10.32□□□□□ -0.76
SF1-211ENST00000448404 IGLV10-54A0A075B6I4 117 aa10.31□□□□□ -0.76
SF1-211ENST00000448404 A0A0B4J2C4 111 aa10.31□□□□□ -0.76
SF1-211ENST00000448404 RPL13AP40429 203 aaKnown RBP10.31□□□□□ -0.76
SF1-211ENST00000448404 UBE2WQ96B02 151 aa10.31□□□□□ -0.76
SF1-211ENST00000448404 Q6Q795 121 aa10.31□□□□□ -0.76
SF1-211ENST00000448404 C2orf82Q6UX34 121 aa10.31□□□□□ -0.76
SF1-211ENST00000448404 OXLD1Q5BKU9 147 aa10.31□□□□□ -0.76
SF1-211ENST00000448404 LINC00308Q8TCZ7 52 aa10.31□□□□□ -0.76
SF1-211ENST00000448404 IGHV4-28A0A0C4DH34 117 aa10.3□□□□□ -0.76
SF1-211ENST00000448404 SPANXDQ9BXN6 97 aa10.3□□□□□ -0.76
SF1-211ENST00000448404 SPANXCQ9NY87 97 aa10.3□□□□□ -0.76
SF1-211ENST00000448404 TRBV10-2A0A0K0K1G8 114 aa10.3□□□□□ -0.76
SF1-211ENST00000448404 M0QXV9 152 aa10.3□□□□□ -0.76
SF1-211ENST00000448404 CSDC2Q9Y534 153 aaKnown RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms