RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 IGKV2-28A0A075B6P5 120 aa5.7□□□□□ -1.5
NEDD9-204ENST00000448183 K7ERS5 55 aa5.7□□□□□ -1.5
NEDD9-204ENST00000448183 IGKV2D-28P01615 120 aa5.7□□□□□ -1.5
NEDD9-204ENST00000448183 MRGPRG-AS1Q2M3A8 158 aa5.7□□□□□ -1.5
NEDD9-204ENST00000448183 IL17DQ8TAD2 202 aa5.7□□□□□ -1.5
NEDD9-204ENST00000448183 PSMG3-AS1Q96PY0 264 aa5.7□□□□□ -1.5
NEDD9-204ENST00000448183 COX17Q14061 63 aa5.7□□□□□ -1.5
NEDD9-204ENST00000448183 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.7□□□□□ -1.5
NEDD9-204ENST00000448183 SMIM26A0A096LP01 95 aa5.7□□□□□ -1.5
NEDD9-204ENST00000448183 LINC00482Q8N8I6 264 aa5.7□□□□□ -1.5
NEDD9-204ENST00000448183 LINC00526Q96FQ7 95 aa5.7□□□□□ -1.5
NEDD9-204ENST00000448183 Q8IZM0 81 aa5.69□□□□□ -1.5
NEDD9-204ENST00000448183 PRR15LQ9BU68 103 aa5.69□□□□□ -1.5
NEDD9-204ENST00000448183 CDC42SE2Q9NRR3 84 aa5.69□□□□□ -1.5
NEDD9-204ENST00000448183 ZNF73O43830 326 aaPredicted RBP5.69□□□□□ -1.5
NEDD9-204ENST00000448183 NTM-AS1Q6ZSK4 140 aa5.69□□□□□ -1.5
NEDD9-204ENST00000448183 NCOR2Q9Y618 2525 aa5.69□□□□□ -1.5
NEDD9-204ENST00000448183 LOC100131303A0A0U1RQF7 123 aa5.69□□□□□ -1.5
NEDD9-204ENST00000448183 A6NED7 52 aa5.69□□□□□ -1.5
NEDD9-204ENST00000448183 HILS1P60008 231 aa5.69□□□□□ -1.5
NEDD9-204ENST00000448183 PRR4Q16378 134 aa5.69□□□□□ -1.5
NEDD9-204ENST00000448183 UBE2D3P61077 147 aa5.69□□□□□ -1.5
NEDD9-204ENST00000448183 UBE2D2P62837 147 aa5.69□□□□□ -1.5
NEDD9-204ENST00000448183 LINC00242Q5T6M2 205 aa5.69□□□□□ -1.5
NEDD9-204ENST00000448183 LELP1Q5T871 98 aa5.69□□□□□ -1.5
NEDD9-204ENST00000448183 TLN1Q9Y490 2541 aaKnown RBP5.68□□□□□ -1.5
NEDD9-204ENST00000448183 IGLV4-69A0A075B6H9 119 aa5.68□□□□□ -1.5
NEDD9-204ENST00000448183 IGLV1-40P01703 118 aa5.68□□□□□ -1.5
NEDD9-204ENST00000448183 Q8N9L7 120 aa5.68□□□□□ -1.5
NEDD9-204ENST00000448183 LINC00694P0DN24 101 aa5.68□□□□□ -1.5
NEDD9-204ENST00000448183 ZNF702PQ9H963 129 aa5.68□□□□□ -1.5
NEDD9-204ENST00000448183 IGF2RP11717 2491 aa5.68□□□□□ -1.5
NEDD9-204ENST00000448183 TRAV7A0A075B6U4 112 aa5.67□□□□□ -1.5
NEDD9-204ENST00000448183 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.67□□□□□ -1.5
NEDD9-204ENST00000448183 A0A0J9YWU9 116 aa5.67□□□□□ -1.5
NEDD9-204ENST00000448183 PRM2P04554 102 aa5.67□□□□□ -1.5
NEDD9-204ENST00000448183 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.67□□□□□ -1.5
NEDD9-204ENST00000448183 RPL28P46779 137 aaKnown RBP5.66□□□□□ -1.5
NEDD9-204ENST00000448183 SMIM1B2RUZ4 78 aa5.66□□□□□ -1.5
NEDD9-204ENST00000448183 CRIP2P52943 208 aaPredicted RBP5.66□□□□□ -1.5
NEDD9-204ENST00000448183 C10orf142B7Z368 130 aa5.66□□□□□ -1.5
NEDD9-204ENST00000448183 KPRPQ5T749 579 aaPredicted RBP5.66□□□□□ -1.5
NEDD9-204ENST00000448183 C1orf195Q5TG92 126 aa5.66□□□□□ -1.5
NEDD9-204ENST00000448183 PPDPFQ9H3Y8 114 aa5.66□□□□□ -1.5
NEDD9-204ENST00000448183 MUC22E2RYF6 1773 aaPredicted RBP5.66□□□□□ -1.5
NEDD9-204ENST00000448183 NUP210LQ5VU65 1888 aa5.66□□□□□ -1.5
NEDD9-204ENST00000448183 TRAV10A0A0B4J240 114 aa5.65□□□□□ -1.5
NEDD9-204ENST00000448183 LRCOL1A6NCL2 159 aa5.65□□□□□ -1.5
NEDD9-204ENST00000448183 CYSRT1A8MQ03 144 aa5.65□□□□□ -1.5
NEDD9-204ENST00000448183 HRCT1Q6UXD1 115 aa5.65□□□□□ -1.5
NEDD9-204ENST00000448183 WFDC10AQ9H1F0 79 aa5.65□□□□□ -1.5
NEDD9-204ENST00000448183 PRORYQ9H606 182 aa5.65□□□□□ -1.5
NEDD9-204ENST00000448183 SERP1Q9Y6X1 66 aa5.65□□□□□ -1.5
NEDD9-204ENST00000448183 M0QXV9 152 aa5.65□□□□□ -1.51
NEDD9-204ENST00000448183 TSPEAR-AS2P59090 65 aa5.65□□□□□ -1.51
NEDD9-204ENST00000448183 EML5Q05BV3 1969 aa5.65□□□□□ -1.51
NEDD9-204ENST00000448183 A0A096LNJ9 63 aa5.65□□□□□ -1.51
NEDD9-204ENST00000448183 SPINK6Q6UWN8 80 aa5.65□□□□□ -1.51
NEDD9-204ENST00000448183 COX8CQ7Z4L0 72 aa5.65□□□□□ -1.51
NEDD9-204ENST00000448183 A0A087WVE0 104 aa5.64□□□□□ -1.51
NEDD9-204ENST00000448183 LINC01006Q8NI28 216 aa5.64□□□□□ -1.51
NEDD9-204ENST00000448183 FAM30AQ9NZY2 134 aa5.64□□□□□ -1.51
NEDD9-204ENST00000448183 TLN2Q9Y4G6 2542 aa5.64□□□□□ -1.51
NEDD9-204ENST00000448183 JMJD1CQ15652 2540 aa5.64□□□□□ -1.51
NEDD9-204ENST00000448183 Q8N814 137 aa5.64□□□□□ -1.51
NEDD9-204ENST00000448183 CELA1Q9UNI1 258 aa5.64□□□□□ -1.51
NEDD9-204ENST00000448183 LOC107984640A0A0U1RRK4 108 aa5.64□□□□□ -1.51
NEDD9-204ENST00000448183 C18orf65Q6ZTR6 163 aa5.64□□□□□ -1.51
NEDD9-204ENST00000448183 ZNF706Q9Y5V0 76 aaPredicted RBP5.64□□□□□ -1.51
NEDD9-204ENST00000448183 USP9XQ93008 2570 aaPredicted RBP5.64□□□□□ -1.51
NEDD9-204ENST00000448183 ATG2AQ2TAZ0 1938 aa5.63□□□□□ -1.51
NEDD9-204ENST00000448183 RPL37AP8A6NKH3 93 aa5.63□□□□□ -1.51
NEDD9-204ENST00000448183 UNQ6190/PRO20217Q6UXQ8 127 aa5.63□□□□□ -1.51
NEDD9-204ENST00000448183 CHCHD7Q9BUK0 85 aa5.63□□□□□ -1.51
NEDD9-204ENST00000448183 INAFM1C9JVW0 142 aa5.62□□□□□ -1.51
NEDD9-204ENST00000448183 ADAMTSL4-AS1Q5T5F5 129 aa5.62□□□□□ -1.51
NEDD9-204ENST00000448183 AMELXQ99217 191 aa5.62□□□□□ -1.51
NEDD9-204ENST00000448183 EGFEM1PQ0D2K5 195 aa5.62□□□□□ -1.51
NEDD9-204ENST00000448183 ABCA12Q86UK0 2595 aa5.62□□□□□ -1.51
NEDD9-204ENST00000448183 ODF3L2Q3SX64 289 aa5.62□□□□□ -1.51
NEDD9-204ENST00000448183 SHISA2Q6UWI4 295 aa5.62□□□□□ -1.51
NEDD9-204ENST00000448183 C7orf33Q8WU49 177 aa5.62□□□□□ -1.51
NEDD9-204ENST00000448183 SETD2Q9BYW2 2564 aaPredicted RBP5.62□□□□□ -1.51
NEDD9-204ENST00000448183 CSDC2Q9Y534 153 aaKnown RBP5.62□□□□□ -1.51
NEDD9-204ENST00000448183 ZFYVE26Q68DK2 2539 aa5.61□□□□□ -1.51
NEDD9-204ENST00000448183 IGLV2-18A0A075B6J9 118 aa5.61□□□□□ -1.51
NEDD9-204ENST00000448183 A0A087WYN8 130 aa5.61□□□□□ -1.51
NEDD9-204ENST00000448183 TRBV10-3A0A0K0K1G6 114 aa5.61□□□□□ -1.51
NEDD9-204ENST00000448183 COX6A2Q02221 97 aa5.61□□□□□ -1.51
NEDD9-204ENST00000448183 SOSTDC1Q6X4U4 206 aa5.61□□□□□ -1.51
NEDD9-204ENST00000448183 Q8N3U1 123 aa5.61□□□□□ -1.51
NEDD9-204ENST00000448183 LINC00208Q96KT6 92 aa5.61□□□□□ -1.51
NEDD9-204ENST00000448183 C1orf137Q5JT78 98 aa5.6□□□□□ -1.51
NEDD9-204ENST00000448183 ZNF462Q96JM2 2506 aa5.6□□□□□ -1.51
NEDD9-204ENST00000448183 FN1P02751 2386 aaKnown RBP5.6□□□□□ -1.51
NEDD9-204ENST00000448183 ZNF580Q9UK33 172 aa5.6□□□□□ -1.51
NEDD9-204ENST00000448183 PRYO14603 147 aa5.59□□□□□ -1.51
NEDD9-204ENST00000448183 C9orf116Q5BN46 136 aaPredicted RBP5.59□□□□□ -1.51
NEDD9-204ENST00000448183 IGLV4-60A0A075B6I1 120 aa5.59□□□□□ -1.51
NEDD9-204ENST00000448183 PKD1L2Q7Z442 2459 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms