RNA–Protein interactions for RNA: ENST00000446921.6

SIK3-205, Transcript of SIK family kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIK3, Length 3,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-205ENST00000446921 H3BS24 57 aa11.42□□□□□ -0.58
SIK3-205ENST00000446921 UBE2L6O14933 153 aa11.42□□□□□ -0.58
SIK3-205ENST00000446921 APOC4P55056 127 aa11.42□□□□□ -0.58
SIK3-205ENST00000446921 RBM12B-AS1Q9P1G2 102 aa11.42□□□□□ -0.58
SIK3-205ENST00000446921 WNK1Q9H4A3 2382 aa11.42□□□□□ -0.58
SIK3-205ENST00000446921 ANKHD1Q8IWZ3 2542 aaKnown RBP11.42□□□□□ -0.58
SIK3-205ENST00000446921 GRNP28799 593 aaKnown RBP11.41□□□□□ -0.58
SIK3-205ENST00000446921 ARRDC1-AS1Q9H2J1 176 aa11.41□□□□□ -0.58
SIK3-205ENST00000446921 Q8N3U1 123 aa11.41□□□□□ -0.58
SIK3-205ENST00000446921 TMEM254Q8TBM7 123 aa11.41□□□□□ -0.58
SIK3-205ENST00000446921 IGHV3OR16-12A0A075B7B8 117 aa11.4□□□□□ -0.58
SIK3-205ENST00000446921 KLLNB2CW77 178 aa11.4□□□□□ -0.58
SIK3-205ENST00000446921 COX7B2Q8TF08 81 aa11.4□□□□□ -0.58
SIK3-205ENST00000446921 LY6EQ16553 131 aa11.4□□□□□ -0.58
SIK3-205ENST00000446921 LINC00242Q5T6M2 205 aa11.4□□□□□ -0.58
SIK3-205ENST00000446921 PRR4Q16378 134 aa11.4□□□□□ -0.58
SIK3-205ENST00000446921 SMIM1B2RUZ4 78 aa11.39□□□□□ -0.59
SIK3-205ENST00000446921 BOD1L1Q8NFC6 3051 aa11.39□□□□□ -0.59
SIK3-205ENST00000446921 TM2D3Q9BRN9 247 aa11.39□□□□□ -0.59
SIK3-205ENST00000446921 NDUFA4O00483 81 aa11.38□□□□□ -0.59
SIK3-205ENST00000446921 NANOS2P60321 138 aaKnown RBP11.38□□□□□ -0.59
SIK3-205ENST00000446921 NREPQ16612 68 aa11.38□□□□□ -0.59
SIK3-205ENST00000446921 CHCHD7Q9BUK0 85 aa11.38□□□□□ -0.59
SIK3-205ENST00000446921 C11orf72Q8NBR9 251 aa11.38□□□□□ -0.59
SIK3-205ENST00000446921 ASPMQ8IZT6 3477 aa11.38□□□□□ -0.59
SIK3-205ENST00000446921 IGHV3-53P01767 116 aa11.38□□□□□ -0.59
SIK3-205ENST00000446921 TMEM256-PLSCR3K7ERE1 68 aa11.37□□□□□ -0.59
SIK3-205ENST00000446921 KHDC1LQ5JSQ8 128 aa11.37□□□□□ -0.59
SIK3-205ENST00000446921 LINC01560Q8TB33 94 aa11.36□□□□□ -0.59
SIK3-205ENST00000446921 SPENQ96T58 3664 aaKnown RBP11.36□□□□□ -0.59
SIK3-205ENST00000446921 CCL18P55774 89 aa11.36□□□□□ -0.59
SIK3-205ENST00000446921 C6orf223Q8N319 242 aa11.36□□□□□ -0.59
SIK3-205ENST00000446921 ADGRG4Q8IZF6 3080 aa11.36□□□□□ -0.59
SIK3-205ENST00000446921 SPG11Q96JI7 2443 aa11.35□□□□□ -0.59
SIK3-205ENST00000446921 Q8N6K4 173 aa11.35□□□□□ -0.59
SIK3-205ENST00000446921 CHKB-CPT1BH3BT56 60 aa11.35□□□□□ -0.59
SIK3-205ENST00000446921 GNLYP22749 145 aa11.35□□□□□ -0.59
SIK3-205ENST00000446921 IGKV2-28A0A075B6P5 120 aa11.34□□□□□ -0.59
SIK3-205ENST00000446921 TRBV10-1A0A0K0K1A3 114 aa11.34□□□□□ -0.59
SIK3-205ENST00000446921 IGKV2D-28P01615 120 aa11.34□□□□□ -0.59
SIK3-205ENST00000446921 Q6ZRU5 148 aa11.34□□□□□ -0.59
SIK3-205ENST00000446921 LOC400499M0QZD8 3231 aa11.34□□□□□ -0.59
SIK3-205ENST00000446921 PRYO14603 147 aa11.34□□□□□ -0.59
SIK3-205ENST00000446921 LINC01547P58512 204 aaPredicted RBP11.33□□□□□ -0.6
SIK3-205ENST00000446921 SMG1Q96Q15 3661 aaKnown RBP11.33□□□□□ -0.6
SIK3-205ENST00000446921 EPM2AB3EWF7 344 aa11.33□□□□□ -0.6
SIK3-205ENST00000446921 UBE2BP63146 152 aa11.33□□□□□ -0.6
SIK3-205ENST00000446921 MINOS1-NBL1R4GNA1 71 aa11.33□□□□□ -0.6
SIK3-205ENST00000446921 TRIOBPQ9H2D6 2365 aa11.33□□□□□ -0.6
SIK3-205ENST00000446921 Q6ZSN1 163 aa11.33□□□□□ -0.6
SIK3-205ENST00000446921 FAM104AQ969W3 186 aa11.33□□□□□ -0.6
SIK3-205ENST00000446921 IGLV5-39A0A0G2JS06 123 aa11.32□□□□□ -0.6
SIK3-205ENST00000446921 TRBV10-3A0A0K0K1G6 114 aa11.3□□□□□ -0.6
SIK3-205ENST00000446921 CSPG4Q6UVK1 2322 aa11.3□□□□□ -0.6
SIK3-205ENST00000446921 ODF3BA8MYP8 253 aa11.3□□□□□ -0.6
SIK3-205ENST00000446921 KTN1-AS1Q86SY8 53 aa11.3□□□□□ -0.6
SIK3-205ENST00000446921 PRR3P79522 188 aaKnown RBP11.29□□□□□ -0.6
SIK3-205ENST00000446921 BPY2O14599 106 aa11.29□□□□□ -0.6
SIK3-205ENST00000446921 ADORA2A-AS1P86434 159 aa11.29□□□□□ -0.6
SIK3-205ENST00000446921 Q6ZVQ6 151 aa11.28□□□□□ -0.6
SIK3-205ENST00000446921 DMDP11532 3685 aa11.27□□□□□ -0.6
SIK3-205ENST00000446921 C19orf84I3L1E1 186 aa11.27□□□□□ -0.6
SIK3-205ENST00000446921 UBE2E2Q96LR5 201 aa11.27□□□□□ -0.61
SIK3-205ENST00000446921 TRGV1A0A0A0MS02 117 aa11.26□□□□□ -0.61
SIK3-205ENST00000446921 OBSCN-AS1Q96MR7 158 aa11.26□□□□□ -0.61
SIK3-205ENST00000446921 Q8N814 137 aa11.26□□□□□ -0.61
SIK3-205ENST00000446921 A8MUN3 132 aa11.26□□□□□ -0.61
SIK3-205ENST00000446921 DMXL1Q9Y485 3027 aa11.25□□□□□ -0.61
SIK3-205ENST00000446921 IGLV5-45A0A087WSX0 123 aa11.25□□□□□ -0.61
SIK3-205ENST00000446921 FAM19A3Q7Z5A8 133 aa11.25□□□□□ -0.61
SIK3-205ENST00000446921 LYRM9A8MSI8 78 aa11.24□□□□□ -0.61
SIK3-205ENST00000446921 BCE1O60756 84 aa11.24□□□□□ -0.61
SIK3-205ENST00000446921 BRD3OSQ6XYD6 125 aa11.24□□□□□ -0.61
SIK3-205ENST00000446921 BBC3Q96PG8 261 aaPredicted RBP11.24□□□□□ -0.61
SIK3-205ENST00000446921 HIGD2AQ9BW72 106 aa11.24□□□□□ -0.61
SIK3-205ENST00000446921 ZNF843Q8N446 348 aa11.24□□□□□ -0.61
SIK3-205ENST00000446921 COL27A1Q8IZC6 1860 aaPredicted RBP11.24□□□□□ -0.61
SIK3-205ENST00000446921 A6NED7 52 aa11.23□□□□□ -0.61
SIK3-205ENST00000446921 DEFB131AP59861 70 aa11.23□□□□□ -0.61
SIK3-205ENST00000446921 Q8N9L7 120 aa11.23□□□□□ -0.61
SIK3-205ENST00000446921 C6orf99Q4VX62 202 aa11.23□□□□□ -0.61
SIK3-205ENST00000446921 NTM-AS1Q6ZSK4 140 aa11.23□□□□□ -0.61
SIK3-205ENST00000446921 C5orf56Q8N8D9 126 aa11.22□□□□□ -0.61
SIK3-205ENST00000446921 USMG5Q96IX5 58 aa11.22□□□□□ -0.61
SIK3-205ENST00000446921 ZFP36P26651 326 aaKnown RBP11.21□□□□□ -0.61
SIK3-205ENST00000446921 LINC00269Q8N2A0 174 aa11.21□□□□□ -0.62
SIK3-205ENST00000446921 TRBV6-4A0A1B0GX49 114 aa11.2□□□□□ -0.62
SIK3-205ENST00000446921 UBE2AP49459 152 aa11.2□□□□□ -0.62
SIK3-205ENST00000446921 C1orf158Q8N1D5 194 aa11.2□□□□□ -0.62
SIK3-205ENST00000446921 M0R2N4 97 aa11.2□□□□□ -0.62
SIK3-205ENST00000446921 NDUFS5O43920 106 aa11.2□□□□□ -0.62
SIK3-205ENST00000446921 ATMQ13315 3056 aa11.2□□□□□ -0.62
SIK3-205ENST00000446921 CELA1Q9UNI1 258 aa11.19□□□□□ -0.62
SIK3-205ENST00000446921 ZNF73O43830 326 aaPredicted RBP11.19□□□□□ -0.62
SIK3-205ENST00000446921 TRAV22A0A0B4J277 110 aa11.19□□□□□ -0.62
SIK3-205ENST00000446921 A8MTW9 85 aa11.19□□□□□ -0.62
SIK3-205ENST00000446921 IBA57-AS1B1ANH7 110 aa11.17□□□□□ -0.62
SIK3-205ENST00000446921 MDFIQ99750 246 aa11.17□□□□□ -0.62
SIK3-205ENST00000446921 IGFL3Q6UXB1 125 aa11.17□□□□□ -0.62
SIK3-205ENST00000446921 CDC42SE2Q9NRR3 84 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms