RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 F5H768 121 aa13.12□□□□□ -0.31
SEMA3D-202ENST00000444867 SAMD5Q5TGI4 173 aa13.12□□□□□ -0.31
SEMA3D-202ENST00000444867 SMIM1B2RUZ4 78 aa13.11□□□□□ -0.31
SEMA3D-202ENST00000444867 NDUFA1O15239 70 aa13.11□□□□□ -0.31
SEMA3D-202ENST00000444867 GTF2H5Q6ZYL4 71 aa13.11□□□□□ -0.31
SEMA3D-202ENST00000444867 TIMM17BO60830 172 aa13.1□□□□□ -0.31
SEMA3D-202ENST00000444867 MRPL23Q16540 153 aaKnown RBP13.1□□□□□ -0.31
SEMA3D-202ENST00000444867 IGLL5B9A064 214 aa13.1□□□□□ -0.31
SEMA3D-202ENST00000444867 FABP2P12104 132 aa13.1□□□□□ -0.31
SEMA3D-202ENST00000444867 GAGE10A6NGK3 116 aa13.09□□□□□ -0.31
SEMA3D-202ENST00000444867 G3V4G9 280 aa13.09□□□□□ -0.31
SEMA3D-202ENST00000444867 SPANXDQ9BXN6 97 aa13.09□□□□□ -0.31
SEMA3D-202ENST00000444867 C11orf68Q9H3H3 251 aaKnown RBP13.09□□□□□ -0.31
SEMA3D-202ENST00000444867 SPANXCQ9NY87 97 aa13.09□□□□□ -0.31
SEMA3D-202ENST00000444867 K7EP34 96 aa13.08□□□□□ -0.32
SEMA3D-202ENST00000444867 RPL24P83731 157 aaKnown RBP13.08□□□□□ -0.32
SEMA3D-202ENST00000444867 LITAFQ99732 161 aa13.08□□□□□ -0.32
SEMA3D-202ENST00000444867 NAA38Q9BRA0 125 aaKnown RBP13.08□□□□□ -0.32
SEMA3D-202ENST00000444867 ICOSQ9Y6W8 199 aa13.08□□□□□ -0.32
SEMA3D-202ENST00000444867 CMYA5Q8N3K9 4069 aa13.08□□□□□ -0.32
SEMA3D-202ENST00000444867 TMEM262E9PQX1 116 aa13.07□□□□□ -0.32
SEMA3D-202ENST00000444867 RBX1P62877 108 aa13.07□□□□□ -0.32
SEMA3D-202ENST00000444867 A0A096LPF7 62 aa13.06□□□□□ -0.32
SEMA3D-202ENST00000444867 HTN3P15516 51 aa13.06□□□□□ -0.32
SEMA3D-202ENST00000444867 RETNQ9HD89 108 aa13.06□□□□□ -0.32
SEMA3D-202ENST00000444867 NBEAL2Q6ZNJ1 2754 aa13.05□□□□□ -0.32
SEMA3D-202ENST00000444867 LINC00959A0A1B0GUT2 108 aa13.05□□□□□ -0.32
SEMA3D-202ENST00000444867 MUSTN1Q8IVN3 82 aa13.05□□□□□ -0.32
SEMA3D-202ENST00000444867 SPCS1Q9Y6A9 102 aa13.05□□□□□ -0.32
SEMA3D-202ENST00000444867 H3BNG1 76 aa13.04□□□□□ -0.32
SEMA3D-202ENST00000444867 MIAQ16674 131 aa13.04□□□□□ -0.32
SEMA3D-202ENST00000444867 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.03□□□□□ -0.32
SEMA3D-202ENST00000444867 IGHV3OR16-9A0A0B4J2B5 98 aa13.03□□□□□ -0.32
SEMA3D-202ENST00000444867 IGKV3OR2-268A0A0C4DH90 116 aa13.03□□□□□ -0.32
SEMA3D-202ENST00000444867 HERV-K104P63124 156 aa13.03□□□□□ -0.32
SEMA3D-202ENST00000444867 CIRBPQ14011 172 aaKnown RBP13.03□□□□□ -0.32
SEMA3D-202ENST00000444867 SS18Q15532 418 aa13.03□□□□□ -0.32
SEMA3D-202ENST00000444867 LELP1Q5T871 98 aa13.03□□□□□ -0.32
SEMA3D-202ENST00000444867 Q9H8V8 135 aa13.03□□□□□ -0.32
SEMA3D-202ENST00000444867 PKD1L1Q8TDX9 2849 aa13.03□□□□□ -0.32
SEMA3D-202ENST00000444867 A4D1N5 150 aa13.02□□□□□ -0.32
SEMA3D-202ENST00000444867 APOMO95445 188 aa13.02□□□□□ -0.32
SEMA3D-202ENST00000444867 CFC1BP0CG36 223 aa13.02□□□□□ -0.32
SEMA3D-202ENST00000444867 CFC1P0CG37 223 aa13.02□□□□□ -0.32
SEMA3D-202ENST00000444867 IFITM1P13164 125 aa13.02□□□□□ -0.32
SEMA3D-202ENST00000444867 A0A087WZ39 114 aa13.02□□□□□ -0.33
SEMA3D-202ENST00000444867 ZNF625Q96I27 306 aaPredicted RBP13.02□□□□□ -0.33
SEMA3D-202ENST00000444867 PGPEP1Q9NXJ5 209 aa13.02□□□□□ -0.33
SEMA3D-202ENST00000444867 A0A0B4J2C4 111 aa13.01□□□□□ -0.33
SEMA3D-202ENST00000444867 ADAMTSL4-AS1Q5T5F5 129 aa13.01□□□□□ -0.33
SEMA3D-202ENST00000444867 LINC01561Q8N1V8 128 aa13.01□□□□□ -0.33
SEMA3D-202ENST00000444867 DNAH3Q8TD57 4116 aa13□□□□□ -0.33
SEMA3D-202ENST00000444867 COX7B2Q8TF08 81 aa13□□□□□ -0.33
SEMA3D-202ENST00000444867 PRO1854Q9UHT4 67 aa13□□□□□ -0.33
SEMA3D-202ENST00000444867 TSPAN13O95857 204 aa12.99□□□□□ -0.33
SEMA3D-202ENST00000444867 PRSS2P07478 247 aa12.99□□□□□ -0.33
SEMA3D-202ENST00000444867 COPS9Q8WXC6 57 aa12.99□□□□□ -0.33
SEMA3D-202ENST00000444867 LYRM7Q5U5X0 104 aa12.97□□□□□ -0.33
SEMA3D-202ENST00000444867 SFTA2Q6UW10 78 aa12.97□□□□□ -0.33
SEMA3D-202ENST00000444867 PPDPFQ9H3Y8 114 aa12.95□□□□□ -0.34
SEMA3D-202ENST00000444867 A0A0J9YWU9 116 aa12.95□□□□□ -0.34
SEMA3D-202ENST00000444867 MEIG1Q5JSS6 88 aa12.95□□□□□ -0.34
SEMA3D-202ENST00000444867 Q6ZTC4 211 aa12.95□□□□□ -0.34
SEMA3D-202ENST00000444867 C5orf38Q86SI9 138 aa12.95□□□□□ -0.34
SEMA3D-202ENST00000444867 LINC00269Q8N2A0 174 aa12.95□□□□□ -0.34
SEMA3D-202ENST00000444867 ANGP03950 147 aaKnown RBP12.94□□□□□ -0.34
SEMA3D-202ENST00000444867 XCL1P47992 114 aa12.94□□□□□ -0.34
SEMA3D-202ENST00000444867 REG3AQ06141 175 aa12.94□□□□□ -0.34
SEMA3D-202ENST00000444867 LYPD5Q6UWN5 251 aa12.94□□□□□ -0.34
SEMA3D-202ENST00000444867 SPATA25Q9BR10 227 aa12.94□□□□□ -0.34
SEMA3D-202ENST00000444867 IGHV3-33P01772 117 aa12.93□□□□□ -0.34
SEMA3D-202ENST00000444867 KPRPQ5T749 579 aaPredicted RBP12.93□□□□□ -0.34
SEMA3D-202ENST00000444867 CD164L2Q6UWJ8 174 aa12.93□□□□□ -0.34
SEMA3D-202ENST00000444867 EIF4EBP3O60516 100 aaPredicted RBP12.92□□□□□ -0.34
SEMA3D-202ENST00000444867 C11orf45Q8TAV5 145 aa12.92□□□□□ -0.34
SEMA3D-202ENST00000444867 TOMM7Q9P0U1 55 aa12.92□□□□□ -0.34
SEMA3D-202ENST00000444867 ERG28Q9UKR5 140 aa12.92□□□□□ -0.34
SEMA3D-202ENST00000444867 CLPSL2Q6UWE3 100 aa12.91□□□□□ -0.34
SEMA3D-202ENST00000444867 LINC00308Q8TCZ7 52 aa12.91□□□□□ -0.34
SEMA3D-202ENST00000444867 TM2D3Q9BRN9 247 aa12.91□□□□□ -0.34
SEMA3D-202ENST00000444867 Q8IZM0 81 aa12.9□□□□□ -0.34
SEMA3D-202ENST00000444867 CHCHD10Q8WYQ3 142 aaPredicted RBP12.9□□□□□ -0.34
SEMA3D-202ENST00000444867 LOC107984156A0A0G2JMH3 177 aa12.89□□□□□ -0.35
SEMA3D-202ENST00000444867 K7EIL1 84 aa12.89□□□□□ -0.35
SEMA3D-202ENST00000444867 ARL17AQ8IVW1 177 aa12.89□□□□□ -0.35
SEMA3D-202ENST00000444867 DAND5Q8N907 189 aa12.89□□□□□ -0.35
SEMA3D-202ENST00000444867 COX7A2LO14548 114 aa12.88□□□□□ -0.35
SEMA3D-202ENST00000444867 NPC2P61916 151 aa12.88□□□□□ -0.35
SEMA3D-202ENST00000444867 Q8N3U1 123 aa12.88□□□□□ -0.35
SEMA3D-202ENST00000444867 PRR34Q9NV39 138 aa12.88□□□□□ -0.35
SEMA3D-202ENST00000444867 NANOS2P60321 138 aaKnown RBP12.88□□□□□ -0.35
SEMA3D-202ENST00000444867 TRBV20-1A0A075B6N2 111 aa12.87□□□□□ -0.35
SEMA3D-202ENST00000444867 DEFB131BA0A096LNP1 70 aa12.87□□□□□ -0.35
SEMA3D-202ENST00000444867 IBA57-AS1B1ANH7 110 aa12.87□□□□□ -0.35
SEMA3D-202ENST00000444867 C6orf226Q5I0X4 101 aa12.87□□□□□ -0.35
SEMA3D-202ENST00000444867 NBEAL1Q6ZS30 2694 aa12.86□□□□□ -0.35
SEMA3D-202ENST00000444867 MGAM2Q2M2H8 2515 aa12.86□□□□□ -0.35
SEMA3D-202ENST00000444867 F8W1H4 67 aa12.86□□□□□ -0.35
SEMA3D-202ENST00000444867 A0A0U1RRA0 63 aa12.85□□□□□ -0.35
SEMA3D-202ENST00000444867 H3BMG7 143 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms