RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 C4orf48Q5BLP8 95 aa8.61□□□□□ -1.03
LTBR-203ENST00000441074 Q6YL49 198 aa8.61□□□□□ -1.03
LTBR-203ENST00000441074 CDKN2A-AS1Q9UH64 79 aa8.61□□□□□ -1.03
LTBR-203ENST00000441074 C22orf24Q9Y442 160 aa8.61□□□□□ -1.03
LTBR-203ENST00000441074 INAFM2P0DMQ5 153 aa8.6□□□□□ -1.03
LTBR-203ENST00000441074 HIST1H4AP62805 103 aaKnown RBP8.6□□□□□ -1.03
LTBR-203ENST00000441074 RPS28P62857 69 aaKnown RBP8.6□□□□□ -1.03
LTBR-203ENST00000441074 SPINK13Q1W4C9 94 aa8.6□□□□□ -1.03
LTBR-203ENST00000441074 KLK5Q9Y337 293 aaPredicted RBP8.6□□□□□ -1.03
LTBR-203ENST00000441074 ANK3Q12955 4377 aaKnown RBP8.6□□□□□ -1.03
LTBR-203ENST00000441074 IGHV3-73A0A0B4J1V6 119 aa8.59□□□□□ -1.03
LTBR-203ENST00000441074 ATOX1O00244 68 aa8.59□□□□□ -1.03
LTBR-203ENST00000441074 PROK1P58294 105 aa8.59□□□□□ -1.03
LTBR-203ENST00000441074 GAGE2AQ6NT46 116 aa8.59□□□□□ -1.03
LTBR-203ENST00000441074 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.59□□□□□ -1.03
LTBR-203ENST00000441074 IGKV2-29A2NJV5 120 aaPredicted RBP8.59□□□□□ -1.03
LTBR-203ENST00000441074 Q8N2B8 174 aa8.59□□□□□ -1.03
LTBR-203ENST00000441074 NSD1Q96L73 2696 aaPredicted RBP8.59□□□□□ -1.03
LTBR-203ENST00000441074 IGLV5-39A0A0G2JS06 123 aa8.58□□□□□ -1.04
LTBR-203ENST00000441074 SMIM9A6NGZ8 99 aa8.58□□□□□ -1.04
LTBR-203ENST00000441074 FAM19A5Q7Z5A7 132 aaPredicted RBP8.58□□□□□ -1.04
LTBR-203ENST00000441074 Q9H8V8 135 aa8.58□□□□□ -1.04
LTBR-203ENST00000441074 SOSTDC1Q6X4U4 206 aa8.58□□□□□ -1.04
LTBR-203ENST00000441074 LINC00467Q9BRT7 94 aa8.58□□□□□ -1.04
LTBR-203ENST00000441074 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.57□□□□□ -1.04
LTBR-203ENST00000441074 C18orf65Q6ZTR6 163 aa8.57□□□□□ -1.04
LTBR-203ENST00000441074 ZNF702PQ9H963 129 aa8.57□□□□□ -1.04
LTBR-203ENST00000441074 FAM218AQ96MZ4 157 aa8.56□□□□□ -1.04
LTBR-203ENST00000441074 Q9UF83 564 aa8.56□□□□□ -1.04
LTBR-203ENST00000441074 COX6A2Q02221 97 aa8.55□□□□□ -1.04
LTBR-203ENST00000441074 PIK3CD-AS1Q5SR53 167 aa8.55□□□□□ -1.04
LTBR-203ENST00000441074 ESM1Q9NQ30 184 aa8.55□□□□□ -1.04
LTBR-203ENST00000441074 FN1P02751 2386 aaKnown RBP8.55□□□□□ -1.04
LTBR-203ENST00000441074 MALP21145 153 aa8.55□□□□□ -1.04
LTBR-203ENST00000441074 ZNF415Q09FC8 603 aa8.55□□□□□ -1.04
LTBR-203ENST00000441074 Q6ZSN1 163 aa8.55□□□□□ -1.04
LTBR-203ENST00000441074 C11orf44Q8N8P7 122 aa8.55□□□□□ -1.04
LTBR-203ENST00000441074 ZNF625Q96I27 306 aaPredicted RBP8.55□□□□□ -1.04
LTBR-203ENST00000441074 A0A0U1RRA0 63 aa8.54□□□□□ -1.04
LTBR-203ENST00000441074 INAFM1C9JVW0 142 aa8.54□□□□□ -1.04
LTBR-203ENST00000441074 DEFB136Q30KP8 78 aa8.54□□□□□ -1.04
LTBR-203ENST00000441074 WNK1Q9H4A3 2382 aa8.54□□□□□ -1.04
LTBR-203ENST00000441074 hADV29S1A0JD25 119 aa8.54□□□□□ -1.04
LTBR-203ENST00000441074 RPL18AQ02543 176 aaKnown RBP8.54□□□□□ -1.04
LTBR-203ENST00000441074 OR13C6PQ8NH95 151 aa8.54□□□□□ -1.04
LTBR-203ENST00000441074 KNCNA6PVL3 124 aa8.53□□□□□ -1.04
LTBR-203ENST00000441074 RBMY1A1P0DJD3 496 aaKnown RBP8.53□□□□□ -1.04
LTBR-203ENST00000441074 RBMY1CP0DJD4 496 aa8.53□□□□□ -1.04
LTBR-203ENST00000441074 RBMY1FQ15415 496 aaKnown RBP8.53□□□□□ -1.04
LTBR-203ENST00000441074 DGAT2L7PQ6IED9 249 aa8.53□□□□□ -1.04
LTBR-203ENST00000441074 PRIMA1Q86XR5 153 aa8.53□□□□□ -1.04
LTBR-203ENST00000441074 IGHV3OR16-12A0A075B7B8 117 aa8.53□□□□□ -1.04
LTBR-203ENST00000441074 A8MTW9 85 aa8.53□□□□□ -1.04
LTBR-203ENST00000441074 PF4P02776 101 aa8.53□□□□□ -1.04
LTBR-203ENST00000441074 SYNJ2BPP57105 145 aa8.53□□□□□ -1.04
LTBR-203ENST00000441074 LINC00242Q5T6M2 205 aa8.53□□□□□ -1.04
LTBR-203ENST00000441074 FAM19A3Q7Z5A8 133 aa8.53□□□□□ -1.04
LTBR-203ENST00000441074 SMIM1B2RUZ4 78 aa8.52□□□□□ -1.05
LTBR-203ENST00000441074 HTN1P15515 57 aa8.52□□□□□ -1.05
LTBR-203ENST00000441074 RPL28P46779 137 aaKnown RBP8.52□□□□□ -1.05
LTBR-203ENST00000441074 IGHV3-38A0A0C4DH36 116 aa8.52□□□□□ -1.05
LTBR-203ENST00000441074 DNAJC9-AS1A6NH13 148 aa8.52□□□□□ -1.05
LTBR-203ENST00000441074 OVOL2Q9BRP0 275 aa8.52□□□□□ -1.05
LTBR-203ENST00000441074 TRAV13-2A0A0B4J235 113 aa8.51□□□□□ -1.05
LTBR-203ENST00000441074 IGHV3-53P01767 116 aa8.51□□□□□ -1.05
LTBR-203ENST00000441074 TMEM258P61165 79 aa8.51□□□□□ -1.05
LTBR-203ENST00000441074 Q6JHZ5 121 aa8.51□□□□□ -1.05
LTBR-203ENST00000441074 Q9HAA7 133 aa8.51□□□□□ -1.05
LTBR-203ENST00000441074 JMJD1CQ15652 2540 aa8.51□□□□□ -1.05
LTBR-203ENST00000441074 DNAL4O96015 105 aa8.51□□□□□ -1.05
LTBR-203ENST00000441074 KHDC1LQ5JSQ8 128 aa8.51□□□□□ -1.05
LTBR-203ENST00000441074 UBE2E2Q96LR5 201 aa8.51□□□□□ -1.05
LTBR-203ENST00000441074 TRAV13-1A0A0B4J241 112 aa8.5□□□□□ -1.05
LTBR-203ENST00000441074 HOXD3P31249 432 aaPredicted RBP8.5□□□□□ -1.05
LTBR-203ENST00000441074 SERP2Q8N6R1 65 aa8.5□□□□□ -1.05
LTBR-203ENST00000441074 DPH3Q96FX2 82 aa8.5□□□□□ -1.05
LTBR-203ENST00000441074 WIPF1O43516 503 aa8.49□□□□□ -1.05
LTBR-203ENST00000441074 CYSTM1Q9H1C7 97 aa8.49□□□□□ -1.05
LTBR-203ENST00000441074 OBSCN-AS1Q96MR7 158 aa8.49□□□□□ -1.05
LTBR-203ENST00000441074 UPK3BQ9BT76 320 aa8.49□□□□□ -1.05
LTBR-203ENST00000441074 A0A1W2PRX2 142 aa8.48□□□□□ -1.05
LTBR-203ENST00000441074 CRPP02741 224 aa8.48□□□□□ -1.05
LTBR-203ENST00000441074 NACAE9PAV3 2078 aa8.48□□□□□ -1.05
LTBR-203ENST00000441074 IGKV3D-7A0A0C4DH55 119 aa8.47□□□□□ -1.05
LTBR-203ENST00000441074 F5H768 121 aa8.47□□□□□ -1.05
LTBR-203ENST00000441074 SLURP1P55000 103 aa8.47□□□□□ -1.05
LTBR-203ENST00000441074 SORL1Q92673 2214 aa8.47□□□□□ -1.05
LTBR-203ENST00000441074 TENM1Q9UKZ4 2725 aa8.47□□□□□ -1.05
LTBR-203ENST00000441074 PRM2P04554 102 aa8.47□□□□□ -1.05
LTBR-203ENST00000441074 DEFB131AP59861 70 aa8.47□□□□□ -1.05
LTBR-203ENST00000441074 C14orf132Q9NPU4 83 aa8.47□□□□□ -1.05
LTBR-203ENST00000441074 VWFP04275 2813 aa8.46□□□□□ -1.05
LTBR-203ENST00000441074 RS1O15537 224 aa8.46□□□□□ -1.05
LTBR-203ENST00000441074 KIR2DL5BQ8NHK3 375 aa8.46□□□□□ -1.05
LTBR-203ENST00000441074 LINC00846Q9NV44 126 aa8.46□□□□□ -1.05
LTBR-203ENST00000441074 H0YGX0 51 aa8.46□□□□□ -1.06
LTBR-203ENST00000441074 LINC00337Q8N6G1 96 aa8.46□□□□□ -1.06
LTBR-203ENST00000441074 A0A087WYN8 130 aa8.45□□□□□ -1.06
LTBR-203ENST00000441074 C9orf129Q5T035 196 aaKnown RBP8.45□□□□□ -1.06
LTBR-203ENST00000441074 IGKV2-28A0A075B6P5 120 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 327.1 ms