RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 DNAJC9-AS1A6NH13 148 aa10.93□□□□□ -0.66
APP-208ENST00000439274 DAZ2Q13117 558 aaKnown RBP10.93□□□□□ -0.66
APP-208ENST00000439274 TTC32Q5I0X7 151 aa10.93□□□□□ -0.66
APP-208ENST00000439274 DAZ4Q86SG3 579 aaKnown RBP10.93□□□□□ -0.66
APP-208ENST00000439274 DAZ3Q9NR90 486 aaKnown RBP10.93□□□□□ -0.66
APP-208ENST00000439274 TRBV10-1A0A0K0K1A3 114 aa10.92□□□□□ -0.66
APP-208ENST00000439274 FAM19A3Q7Z5A8 133 aa10.92□□□□□ -0.66
APP-208ENST00000439274 TRAV25A0A0B4J276 109 aa10.92□□□□□ -0.66
APP-208ENST00000439274 NHLRC4P0CG21 123 aaPredicted RBP10.92□□□□□ -0.66
APP-208ENST00000439274 CSDC2Q9Y534 153 aaKnown RBP10.92□□□□□ -0.66
APP-208ENST00000439274 GIG44P09565 113 aaPredicted RBP10.91□□□□□ -0.66
APP-208ENST00000439274 GAGE7O76087 117 aa10.91□□□□□ -0.66
APP-208ENST00000439274 GAGE12FP0CL80 117 aa10.91□□□□□ -0.66
APP-208ENST00000439274 GAGE12GP0CL81 117 aa10.91□□□□□ -0.66
APP-208ENST00000439274 GAGE12IP0CL82 117 aa10.91□□□□□ -0.66
APP-208ENST00000439274 ESM1Q9NQ30 184 aa10.91□□□□□ -0.66
APP-208ENST00000439274 FLNAP21333 2647 aaKnown RBP10.9□□□□□ -0.66
APP-208ENST00000439274 IGKV3OR2-268A0A0C4DH90 116 aa10.89□□□□□ -0.67
APP-208ENST00000439274 COX7A2LO14548 114 aa10.89□□□□□ -0.67
APP-208ENST00000439274 UBE2L6O14933 153 aa10.89□□□□□ -0.67
APP-208ENST00000439274 RPL35AP18077 110 aaKnown RBP10.89□□□□□ -0.67
APP-208ENST00000439274 NDUFV3P56181 108 aaKnown RBP10.89□□□□□ -0.67
APP-208ENST00000439274 PLAC8L1A1L4L8 177 aa10.89□□□□□ -0.67
APP-208ENST00000439274 TMEM243Q9BU79 118 aa10.89□□□□□ -0.67
APP-208ENST00000439274 GCN1Q92616 2671 aaKnown RBP10.88□□□□□ -0.67
APP-208ENST00000439274 TRGV2A0A075B6R0 118 aa10.88□□□□□ -0.67
APP-208ENST00000439274 SHISA2Q6UWI4 295 aa10.88□□□□□ -0.67
APP-208ENST00000439274 DEFB121Q5J5C9 76 aa10.87□□□□□ -0.67
APP-208ENST00000439274 TMEM86BQ8N661 226 aa10.87□□□□□ -0.67
APP-208ENST00000439274 GAGE6Q13070 117 aa10.86□□□□□ -0.67
APP-208ENST00000439274 FAM218AQ96MZ4 157 aa10.86□□□□□ -0.67
APP-208ENST00000439274 TOMM7Q9P0U1 55 aa10.86□□□□□ -0.67
APP-208ENST00000439274 HERV-K104P63124 156 aa10.85□□□□□ -0.67
APP-208ENST00000439274 KRTAP1-1Q07627 177 aa10.85□□□□□ -0.67
APP-208ENST00000439274 COPS9Q8WXC6 57 aa10.84□□□□□ -0.67
APP-208ENST00000439274 IGLV4-60A0A075B6I1 120 aa10.84□□□□□ -0.67
APP-208ENST00000439274 Q6Q795 121 aa10.84□□□□□ -0.67
APP-208ENST00000439274 C16orf74Q96GX8 76 aa10.84□□□□□ -0.67
APP-208ENST00000439274 MTORP42345 2549 aa10.83□□□□□ -0.68
APP-208ENST00000439274 UNC79Q9P2D8 2635 aa10.83□□□□□ -0.68
APP-208ENST00000439274 ACANP16112 2415 aa10.83□□□□□ -0.68
APP-208ENST00000439274 FAM240AA0A1B0GVK7 77 aa10.83□□□□□ -0.68
APP-208ENST00000439274 TRGV4A0A0C4DH28 118 aa10.83□□□□□ -0.68
APP-208ENST00000439274 B5MCH6 92 aa10.83□□□□□ -0.68
APP-208ENST00000439274 MIR7-3HGQ8N6C7 128 aa10.83□□□□□ -0.68
APP-208ENST00000439274 COX7B2Q8TF08 81 aa10.83□□□□□ -0.68
APP-208ENST00000439274 CCDC179H3BU77 68 aa10.82□□□□□ -0.68
APP-208ENST00000439274 ITPR2Q14571 2701 aa10.82□□□□□ -0.68
APP-208ENST00000439274 ANK3Q12955 4377 aaKnown RBP10.82□□□□□ -0.68
APP-208ENST00000439274 C19orf73Q9NVV2 129 aa10.82□□□□□ -0.68
APP-208ENST00000439274 SS18L2Q9UHA2 77 aa10.82□□□□□ -0.68
APP-208ENST00000439274 LINC01006Q8NI28 216 aa10.81□□□□□ -0.68
APP-208ENST00000439274 TRBV6-4A0A1B0GX49 114 aa10.81□□□□□ -0.68
APP-208ENST00000439274 BAALC-AS2P0C853 105 aa10.81□□□□□ -0.68
APP-208ENST00000439274 LINC00337Q8N6G1 96 aa10.81□□□□□ -0.68
APP-208ENST00000439274 CSNK1G2-AS1Q8NCQ2 148 aa10.81□□□□□ -0.68
APP-208ENST00000439274 Q9HAA7 133 aa10.81□□□□□ -0.68
APP-208ENST00000439274 C22orf24Q9Y442 160 aa10.81□□□□□ -0.68
APP-208ENST00000439274 IGKV2-28A0A075B6P5 120 aa10.8□□□□□ -0.68
APP-208ENST00000439274 IGKV2D-28P01615 120 aa10.8□□□□□ -0.68
APP-208ENST00000439274 CHCHD5Q9BSY4 110 aa10.8□□□□□ -0.68
APP-208ENST00000439274 TRACP01848 142 aa10.79□□□□□ -0.68
APP-208ENST00000439274 MRPL23Q16540 153 aaKnown RBP10.79□□□□□ -0.68
APP-208ENST00000439274 CRPP02741 224 aa10.79□□□□□ -0.68
APP-208ENST00000439274 LINC00158P58513 81 aa10.79□□□□□ -0.68
APP-208ENST00000439274 FHL2Q14192 279 aa10.79□□□□□ -0.68
APP-208ENST00000439274 SND1-IT1Q9HBX3 110 aa10.79□□□□□ -0.68
APP-208ENST00000439274 TRBV6-8A0A0A6YYG3 113 aa10.78□□□□□ -0.68
APP-208ENST00000439274 IGLV1-51P01701 117 aa10.78□□□□□ -0.68
APP-208ENST00000439274 C5orf38Q86SI9 138 aa10.78□□□□□ -0.68
APP-208ENST00000439274 SMCR5Q8TEV8 140 aa10.78□□□□□ -0.68
APP-208ENST00000439274 OVOL2Q9BRP0 275 aa10.78□□□□□ -0.68
APP-208ENST00000439274 FN1P02751 2386 aaKnown RBP10.78□□□□□ -0.68
APP-208ENST00000439274 TRAV13-2A0A0B4J235 113 aa10.77□□□□□ -0.69
APP-208ENST00000439274 IGHV3OR16-9A0A0B4J2B5 98 aa10.77□□□□□ -0.69
APP-208ENST00000439274 PFN2P35080 140 aa10.76□□□□□ -0.69
APP-208ENST00000439274 C11orf68Q9H3H3 251 aaKnown RBP10.76□□□□□ -0.69
APP-208ENST00000439274 DEFB130BP0DP73 79 aa10.76□□□□□ -0.69
APP-208ENST00000439274 DEFB130AP0DP74 79 aa10.76□□□□□ -0.69
APP-208ENST00000439274 RPL28P46779 137 aaKnown RBP10.76□□□□□ -0.69
APP-208ENST00000439274 CCL18P55774 89 aa10.75□□□□□ -0.69
APP-208ENST00000439274 CMC4P56277 68 aaPredicted RBP10.75□□□□□ -0.69
APP-208ENST00000439274 SMIM11BQ8TCY0 68 aa10.75□□□□□ -0.69
APP-208ENST00000439274 HECTD1Q9ULT8 2610 aa10.74□□□□□ -0.69
APP-208ENST00000439274 A0A087WYN8 130 aa10.74□□□□□ -0.69
APP-208ENST00000439274 TRBV7-7A0A0K0K1E9 115 aa10.74□□□□□ -0.69
APP-208ENST00000439274 FASNP49327 2511 aaKnown RBP10.74□□□□□ -0.69
APP-208ENST00000439274 FAM222AQ5U5X8 452 aa10.74□□□□□ -0.69
APP-208ENST00000439274 PPDPFQ9H3Y8 114 aa10.74□□□□□ -0.69
APP-208ENST00000439274 NBEAL2Q6ZNJ1 2754 aa10.73□□□□□ -0.69
APP-208ENST00000439274 PF4P02776 101 aa10.73□□□□□ -0.69
APP-208ENST00000439274 A0A087WZ39 114 aa10.73□□□□□ -0.69
APP-208ENST00000439274 ACYP1P07311 99 aa10.73□□□□□ -0.69
APP-208ENST00000439274 MALP21145 153 aa10.72□□□□□ -0.69
APP-208ENST00000439274 LINC00959A0A1B0GUT2 108 aa10.71□□□□□ -0.69
APP-208ENST00000439274 ATP5G1P05496 136 aa10.71□□□□□ -0.69
APP-208ENST00000439274 C9orf129Q5T035 196 aaKnown RBP10.71□□□□□ -0.69
APP-208ENST00000439274 CLPSL2Q6UWE3 100 aa10.71□□□□□ -0.69
APP-208ENST00000439274 FAM110AQ9BQ89 295 aa10.71□□□□□ -0.69
APP-208ENST00000439274 RNASE1P07998 156 aaKnown RBP10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms