RNA–Protein interactions for RNA: ENST00000438107.1

FAM239A-202, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 5 BASIC

Gene FAM239A, Length 2,155 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-202ENST00000438107 FAM110AQ9BQ89 295 aa13.69□□□□□ -0.22
FAM239A-202ENST00000438107 A0A0U1RRA0 63 aa13.69□□□□□ -0.22
FAM239A-202ENST00000438107 TRBV6-4A0A1B0GX49 114 aa13.68□□□□□ -0.22
FAM239A-202ENST00000438107 PLAC8L1A1L4L8 177 aa13.68□□□□□ -0.22
FAM239A-202ENST00000438107 GIG44P09565 113 aaPredicted RBP13.68□□□□□ -0.22
FAM239A-202ENST00000438107 C11orf44Q8N8P7 122 aa13.68□□□□□ -0.22
FAM239A-202ENST00000438107 MYO9AB2RTY4 2548 aa13.68□□□□□ -0.22
FAM239A-202ENST00000438107 WFDC11Q8NEX6 87 aa13.68□□□□□ -0.22
FAM239A-202ENST00000438107 KMT2BQ9UMN6 2715 aaPredicted RBP13.67□□□□□ -0.22
FAM239A-202ENST00000438107 OVOL2Q9BRP0 275 aa13.67□□□□□ -0.22
FAM239A-202ENST00000438107 TRACP01848 142 aa13.66□□□□□ -0.22
FAM239A-202ENST00000438107 FLNAP21333 2647 aaKnown RBP13.66□□□□□ -0.22
FAM239A-202ENST00000438107 SONP18583 2426 aaKnown RBP13.66□□□□□ -0.22
FAM239A-202ENST00000438107 PF4P02776 101 aa13.65□□□□□ -0.22
FAM239A-202ENST00000438107 NDUFV3P56181 108 aaKnown RBP13.65□□□□□ -0.22
FAM239A-202ENST00000438107 ESM1Q9NQ30 184 aa13.65□□□□□ -0.22
FAM239A-202ENST00000438107 HELZ2Q9BYK8 2649 aaKnown RBP13.65□□□□□ -0.22
FAM239A-202ENST00000438107 TRGV2A0A075B6R0 118 aa13.65□□□□□ -0.22
FAM239A-202ENST00000438107 GAGE7O76087 117 aa13.64□□□□□ -0.23
FAM239A-202ENST00000438107 GAGE12FP0CL80 117 aa13.64□□□□□ -0.23
FAM239A-202ENST00000438107 GAGE12GP0CL81 117 aa13.64□□□□□ -0.23
FAM239A-202ENST00000438107 GAGE12IP0CL82 117 aa13.64□□□□□ -0.23
FAM239A-202ENST00000438107 TTC32Q5I0X7 151 aa13.64□□□□□ -0.23
FAM239A-202ENST00000438107 NHLRC4P0CG21 123 aaPredicted RBP13.64□□□□□ -0.23
FAM239A-202ENST00000438107 FAM222AQ5U5X8 452 aa13.64□□□□□ -0.23
FAM239A-202ENST00000438107 ACYP1P07311 99 aa13.63□□□□□ -0.23
FAM239A-202ENST00000438107 COX7B2Q8TF08 81 aa13.63□□□□□ -0.23
FAM239A-202ENST00000438107 AKAP9Q99996 3911 aa13.63□□□□□ -0.23
FAM239A-202ENST00000438107 PDZD2O15018 2839 aa13.63□□□□□ -0.23
FAM239A-202ENST00000438107 TRAV13-2A0A0B4J235 113 aa13.62□□□□□ -0.23
FAM239A-202ENST00000438107 C16orf95Q9H693 158 aa13.62□□□□□ -0.23
FAM239A-202ENST00000438107 IGLV1-51P01701 117 aa13.62□□□□□ -0.23
FAM239A-202ENST00000438107 PLA2G2AP14555 144 aa13.62□□□□□ -0.23
FAM239A-202ENST00000438107 CSNK1G2-AS1Q8NCQ2 148 aa13.62□□□□□ -0.23
FAM239A-202ENST00000438107 C19orf73Q9NVV2 129 aa13.62□□□□□ -0.23
FAM239A-202ENST00000438107 ITPR2Q14571 2701 aa13.61□□□□□ -0.23
FAM239A-202ENST00000438107 TRGV4A0A0C4DH28 118 aa13.61□□□□□ -0.23
FAM239A-202ENST00000438107 LOC100131303A0A0U1RQF7 123 aa13.61□□□□□ -0.23
FAM239A-202ENST00000438107 GAGE6Q13070 117 aa13.6□□□□□ -0.23
FAM239A-202ENST00000438107 RPL28P46779 137 aaKnown RBP13.59□□□□□ -0.23
FAM239A-202ENST00000438107 LINC01006Q8NI28 216 aa13.59□□□□□ -0.23
FAM239A-202ENST00000438107 J3QKU1 62 aa13.59□□□□□ -0.23
FAM239A-202ENST00000438107 RPL35AP18077 110 aaKnown RBP13.59□□□□□ -0.23
FAM239A-202ENST00000438107 TRBV6-8A0A0A6YYG3 113 aa13.58□□□□□ -0.24
FAM239A-202ENST00000438107 WFDC10AQ9H1F0 79 aa13.58□□□□□ -0.24
FAM239A-202ENST00000438107 NF1P21359 2839 aa13.58□□□□□ -0.24
FAM239A-202ENST00000438107 FHL2Q14192 279 aa13.58□□□□□ -0.24
FAM239A-202ENST00000438107 CUBNO60494 3623 aa13.57□□□□□ -0.24
FAM239A-202ENST00000438107 TRBV7-7A0A0K0K1E9 115 aa13.57□□□□□ -0.24
FAM239A-202ENST00000438107 CRPP02741 224 aa13.57□□□□□ -0.24
FAM239A-202ENST00000438107 RNASE1P07998 156 aaKnown RBP13.57□□□□□ -0.24
FAM239A-202ENST00000438107 MIR7-3HGQ8N6C7 128 aa13.56□□□□□ -0.24
FAM239A-202ENST00000438107 IGHV3OR16-9A0A0B4J2B5 98 aa13.56□□□□□ -0.24
FAM239A-202ENST00000438107 BAALC-AS2P0C853 105 aa13.56□□□□□ -0.24
FAM239A-202ENST00000438107 ACANP16112 2415 aa13.55□□□□□ -0.24
FAM239A-202ENST00000438107 WNK1Q9H4A3 2382 aa13.55□□□□□ -0.24
FAM239A-202ENST00000438107 IGLV4-60A0A075B6I1 120 aa13.55□□□□□ -0.24
FAM239A-202ENST00000438107 FAM218AQ96MZ4 157 aa13.55□□□□□ -0.24
FAM239A-202ENST00000438107 SND1-IT1Q9HBX3 110 aa13.55□□□□□ -0.24
FAM239A-202ENST00000438107 KRTAP1-1Q07627 177 aa13.54□□□□□ -0.24
FAM239A-202ENST00000438107 TOMM7Q9P0U1 55 aa13.54□□□□□ -0.24
FAM239A-202ENST00000438107 UNC79Q9P2D8 2635 aa13.54□□□□□ -0.24
FAM239A-202ENST00000438107 A0A087WZ39 114 aa13.54□□□□□ -0.24
FAM239A-202ENST00000438107 IBA57-AS1B1ANH7 110 aa13.54□□□□□ -0.24
FAM239A-202ENST00000438107 IGKV2-28A0A075B6P5 120 aa13.53□□□□□ -0.24
FAM239A-202ENST00000438107 IGKV2D-28P01615 120 aa13.53□□□□□ -0.24
FAM239A-202ENST00000438107 LINC00337Q8N6G1 96 aa13.53□□□□□ -0.24
FAM239A-202ENST00000438107 CHCHD5Q9BSY4 110 aa13.53□□□□□ -0.24
FAM239A-202ENST00000438107 IMUPQ9GZP8 106 aa13.52□□□□□ -0.24
FAM239A-202ENST00000438107 LINC00158P58513 81 aa13.52□□□□□ -0.25
FAM239A-202ENST00000438107 C22orf24Q9Y442 160 aa13.52□□□□□ -0.25
FAM239A-202ENST00000438107 IGKV3OR2-268A0A0C4DH90 116 aa13.51□□□□□ -0.25
FAM239A-202ENST00000438107 INAFM2P0DMQ5 153 aa13.51□□□□□ -0.25
FAM239A-202ENST00000438107 KIR2DL5BQ8NHK3 375 aa13.5□□□□□ -0.25
FAM239A-202ENST00000438107 CCL18P55774 89 aa13.49□□□□□ -0.25
FAM239A-202ENST00000438107 SDIM1Q6ZPB5 146 aa13.49□□□□□ -0.25
FAM239A-202ENST00000438107 H0YGX0 51 aa13.48□□□□□ -0.25
FAM239A-202ENST00000438107 MALP21145 153 aa13.48□□□□□ -0.25
FAM239A-202ENST00000438107 LINC00643Q86TS7 51 aa13.48□□□□□ -0.25
FAM239A-202ENST00000438107 LINC00612Q8N6U2 182 aa13.48□□□□□ -0.25
FAM239A-202ENST00000438107 LINC00959A0A1B0GUT2 108 aa13.48□□□□□ -0.25
FAM239A-202ENST00000438107 B5MCH6 92 aa13.48□□□□□ -0.25
FAM239A-202ENST00000438107 GCN1Q92616 2671 aaKnown RBP13.48□□□□□ -0.25
FAM239A-202ENST00000438107 SMIM11BQ8TCY0 68 aa13.47□□□□□ -0.25
FAM239A-202ENST00000438107 MTORP42345 2549 aa13.47□□□□□ -0.25
FAM239A-202ENST00000438107 CCDC179H3BU77 68 aa13.47□□□□□ -0.25
FAM239A-202ENST00000438107 C5orf38Q86SI9 138 aa13.45□□□□□ -0.26
FAM239A-202ENST00000438107 SETD2Q9BYW2 2564 aaPredicted RBP13.45□□□□□ -0.26
FAM239A-202ENST00000438107 SMCR5Q8TEV8 140 aa13.45□□□□□ -0.26
FAM239A-202ENST00000438107 A0A1B0GUV1 79 aa13.44□□□□□ -0.26
FAM239A-202ENST00000438107 DNAL4O96015 105 aa13.44□□□□□ -0.26
FAM239A-202ENST00000438107 Q9HAA7 133 aa13.44□□□□□ -0.26
FAM239A-202ENST00000438107 LINC01561Q8N1V8 128 aa13.44□□□□□ -0.26
FAM239A-202ENST00000438107 FASNP49327 2511 aaKnown RBP13.44□□□□□ -0.26
FAM239A-202ENST00000438107 NOTCH3Q9UM47 2321 aa13.42□□□□□ -0.26
FAM239A-202ENST00000438107 SS18Q15532 418 aa13.42□□□□□ -0.26
FAM239A-202ENST00000438107 PFN2P35080 140 aa13.42□□□□□ -0.26
FAM239A-202ENST00000438107 C6orf226Q5I0X4 101 aa13.42□□□□□ -0.26
FAM239A-202ENST00000438107 SS18L2Q9UHA2 77 aa13.42□□□□□ -0.26
FAM239A-202ENST00000438107 DEFB130BP0DP73 79 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms