RNA–Protein interactions for RNA: ENST00000437811.1

HLA-DPA1-243, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-243ENST00000437811 TSPEAR-AS2P59090 65 aa9.24□□□□□ -0.93
HLA-DPA1-243ENST00000437811 SS18Q15532 418 aa9.24□□□□□ -0.93
HLA-DPA1-243ENST00000437811 CLPSL2Q6UWE3 100 aa9.24□□□□□ -0.93
HLA-DPA1-243ENST00000437811 C2orf91Q6ZV80 131 aa9.24□□□□□ -0.93
HLA-DPA1-243ENST00000437811 MAPKAPK5-AS1Q8N8E1 139 aa9.24□□□□□ -0.93
HLA-DPA1-243ENST00000437811 PLEKHB2Q96CS7 222 aa9.24□□□□□ -0.93
HLA-DPA1-243ENST00000437811 IGHV3-64A0A075B6Q5 118 aa9.24□□□□□ -0.93
HLA-DPA1-243ENST00000437811 IGHV1-58A0A0C4DH39 117 aa9.24□□□□□ -0.93
HLA-DPA1-243ENST00000437811 J3QQQ9 107 aa9.24□□□□□ -0.93
HLA-DPA1-243ENST00000437811 IGHV3-30P01768 117 aa9.24□□□□□ -0.93
HLA-DPA1-243ENST00000437811 IGHV3-33P01772 117 aa9.24□□□□□ -0.93
HLA-DPA1-243ENST00000437811 SPINK8P0C7L1 97 aa9.24□□□□□ -0.93
HLA-DPA1-243ENST00000437811 IGHV3-30-3P0DP02 117 aa9.24□□□□□ -0.93
HLA-DPA1-243ENST00000437811 IGHV3-30-5P0DP03 117 aa9.24□□□□□ -0.93
HLA-DPA1-243ENST00000437811 REG3AQ06141 175 aa9.24□□□□□ -0.93
HLA-DPA1-243ENST00000437811 MRPS16Q9Y3D3 137 aaKnown RBP9.24□□□□□ -0.93
HLA-DPA1-243ENST00000437811 TRAV8-3A0A0A6YYJ7 113 aa9.23□□□□□ -0.93
HLA-DPA1-243ENST00000437811 MYMXA0A1B0GTQ4 84 aa9.23□□□□□ -0.93
HLA-DPA1-243ENST00000437811 SIVA1O15304 175 aa9.23□□□□□ -0.93
HLA-DPA1-243ENST00000437811 LGALS3P17931 250 aaKnown RBP9.23□□□□□ -0.93
HLA-DPA1-243ENST00000437811 CTAG1AP78358 180 aa9.23□□□□□ -0.93
HLA-DPA1-243ENST00000437811 IGHV3OR16-9A0A0B4J2B5 98 aa9.22□□□□□ -0.93
HLA-DPA1-243ENST00000437811 IGLV5-39A0A0G2JS06 123 aa9.22□□□□□ -0.93
HLA-DPA1-243ENST00000437811 ZNF815PA8K554 130 aa9.22□□□□□ -0.93
HLA-DPA1-243ENST00000437811 SMIM1B2RUZ4 78 aa9.22□□□□□ -0.93
HLA-DPA1-243ENST00000437811 LINC01556Q5JQF7 62 aa9.22□□□□□ -0.93
HLA-DPA1-243ENST00000437811 PRR34Q9NV39 138 aa9.22□□□□□ -0.93
HLA-DPA1-243ENST00000437811 KLK12Q9UKR0 248 aa9.22□□□□□ -0.93
HLA-DPA1-243ENST00000437811 LINC00588Q9Y4M8 146 aa9.22□□□□□ -0.93
HLA-DPA1-243ENST00000437811 CCL18P55774 89 aa9.21□□□□□ -0.94
HLA-DPA1-243ENST00000437811 HIGD1BQ9P298 99 aa9.21□□□□□ -0.94
HLA-DPA1-243ENST00000437811 NUPR2A6NF83 97 aa9.2□□□□□ -0.94
HLA-DPA1-243ENST00000437811 XCL1P47992 114 aa9.2□□□□□ -0.94
HLA-DPA1-243ENST00000437811 CHCHD10Q8WYQ3 142 aaPredicted RBP9.2□□□□□ -0.94
HLA-DPA1-243ENST00000437811 APLNQ9ULZ1 77 aa9.2□□□□□ -0.94
HLA-DPA1-243ENST00000437811 A0A087WZ39 114 aa9.19□□□□□ -0.94
HLA-DPA1-243ENST00000437811 CRPP02741 224 aa9.19□□□□□ -0.94
HLA-DPA1-243ENST00000437811 DNAH10OSP0CZ25 163 aa9.19□□□□□ -0.94
HLA-DPA1-243ENST00000437811 ENHOQ6UWT2 76 aa9.19□□□□□ -0.94
HLA-DPA1-243ENST00000437811 UPK3BQ9BT76 320 aa9.19□□□□□ -0.94
HLA-DPA1-243ENST00000437811 ZFAND6Q6FIF0 208 aa9.18□□□□□ -0.94
HLA-DPA1-243ENST00000437811 CD164L2Q6UWJ8 174 aa9.18□□□□□ -0.94
HLA-DPA1-243ENST00000437811 C5orf38Q86SI9 138 aa9.18□□□□□ -0.94
HLA-DPA1-243ENST00000437811 LINC01561Q8N1V8 128 aa9.18□□□□□ -0.94
HLA-DPA1-243ENST00000437811 UBE2WQ96B02 151 aa9.18□□□□□ -0.94
HLA-DPA1-243ENST00000437811 IGLV10-54A0A075B6I4 117 aa9.17□□□□□ -0.94
HLA-DPA1-243ENST00000437811 KLK5Q9Y337 293 aaPredicted RBP9.17□□□□□ -0.94
HLA-DPA1-243ENST00000437811 TRAV8-4A0A0B4J246 113 aa9.16□□□□□ -0.94
HLA-DPA1-243ENST00000437811 M0R143 59 aa9.16□□□□□ -0.94
HLA-DPA1-243ENST00000437811 EREGO14944 169 aa9.16□□□□□ -0.94
HLA-DPA1-243ENST00000437811 HSD52Q0P140 79 aa9.16□□□□□ -0.94
HLA-DPA1-243ENST00000437811 MIAQ16674 131 aa9.16□□□□□ -0.94
HLA-DPA1-243ENST00000437811 SNHG12Q9BXW3 62 aa9.16□□□□□ -0.94
HLA-DPA1-243ENST00000437811 NDUFA12Q9UI09 145 aa9.16□□□□□ -0.94
HLA-DPA1-243ENST00000437811 MEGF8Q7Z7M0 2845 aa9.16□□□□□ -0.94
HLA-DPA1-243ENST00000437811 PRKDCP78527 4128 aaKnown RBP9.16□□□□□ -0.94
HLA-DPA1-243ENST00000437811 COL7A1Q02388 2944 aa9.16□□□□□ -0.94
HLA-DPA1-243ENST00000437811 COX7A2LO14548 114 aa9.15□□□□□ -0.94
HLA-DPA1-243ENST00000437811 FOXI1Q12951 378 aa9.15□□□□□ -0.94
HLA-DPA1-243ENST00000437811 SCGB1D4Q6XE38 83 aa9.15□□□□□ -0.94
HLA-DPA1-243ENST00000437811 GAGE12HA6NDE8 117 aa9.14□□□□□ -0.95
HLA-DPA1-243ENST00000437811 NDUFA1O15239 70 aa9.14□□□□□ -0.95
HLA-DPA1-243ENST00000437811 HINT1P49773 126 aaPredicted RBP9.14□□□□□ -0.95
HLA-DPA1-243ENST00000437811 C10orf126Q8N4M7 172 aa9.14□□□□□ -0.95
HLA-DPA1-243ENST00000437811 COX7B2Q8TF08 81 aa9.14□□□□□ -0.95
HLA-DPA1-243ENST00000437811 STAB2Q8WWQ8 2551 aa9.14□□□□□ -0.95
HLA-DPA1-243ENST00000437811 A0A0J9YXY3 114 aa9.13□□□□□ -0.95
HLA-DPA1-243ENST00000437811 TAL2Q16559 108 aa9.12□□□□□ -0.95
HLA-DPA1-243ENST00000437811 BVES-AS1Q5T3Y7 98 aa9.12□□□□□ -0.95
HLA-DPA1-243ENST00000437811 UBE2DNLQ8IWF7 75 aa9.12□□□□□ -0.95
HLA-DPA1-243ENST00000437811 DYNC2H1Q8NCM8 4307 aaKnown RBP9.12□□□□□ -0.95
HLA-DPA1-243ENST00000437811 BATFQ16520 125 aa9.12□□□□□ -0.95
HLA-DPA1-243ENST00000437811 ZNF625Q96I27 306 aaPredicted RBP9.12□□□□□ -0.95
HLA-DPA1-243ENST00000437811 Q9H8V8 135 aa9.12□□□□□ -0.95
HLA-DPA1-243ENST00000437811 SPANXB1Q9NS25 103 aaPredicted RBP9.12□□□□□ -0.95
HLA-DPA1-243ENST00000437811 TOMM7Q9P0U1 55 aa9.12□□□□□ -0.95
HLA-DPA1-243ENST00000437811 IBA57-AS1B1ANH7 110 aa9.11□□□□□ -0.95
HLA-DPA1-243ENST00000437811 MALP21145 153 aa9.11□□□□□ -0.95
HLA-DPA1-243ENST00000437811 KRTAP26-1Q6PEX3 210 aa9.11□□□□□ -0.95
HLA-DPA1-243ENST00000437811 Q8IZM0 81 aa9.1□□□□□ -0.95
HLA-DPA1-243ENST00000437811 ORAOV1Q8WV07 137 aa9.1□□□□□ -0.95
HLA-DPA1-243ENST00000437811 HIST1H4GQ99525 98 aa9.1□□□□□ -0.95
HLA-DPA1-243ENST00000437811 C1orf43Q9BWL3 253 aa9.1□□□□□ -0.95
HLA-DPA1-243ENST00000437811 TMEM238C9JI98 176 aa9.09□□□□□ -0.95
HLA-DPA1-243ENST00000437811 APOMO95445 188 aa9.09□□□□□ -0.95
HLA-DPA1-243ENST00000437811 HERV-K104P63124 156 aa9.09□□□□□ -0.95
HLA-DPA1-243ENST00000437811 K7EP13 123 aa9.08□□□□□ -0.96
HLA-DPA1-243ENST00000437811 TIMM17BO60830 172 aa9.08□□□□□ -0.96
HLA-DPA1-243ENST00000437811 PRSS2P07478 247 aa9.08□□□□□ -0.96
HLA-DPA1-243ENST00000437811 GCSHP23434 173 aa9.08□□□□□ -0.96
HLA-DPA1-243ENST00000437811 KIAA0087Q14695 138 aa9.08□□□□□ -0.96
HLA-DPA1-243ENST00000437811 LBHQ53QV2 105 aaPredicted RBP9.08□□□□□ -0.96
HLA-DPA1-243ENST00000437811 CEND1Q8N111 149 aa9.08□□□□□ -0.96
HLA-DPA1-243ENST00000437811 LITAFQ99732 161 aa9.08□□□□□ -0.96
HLA-DPA1-243ENST00000437811 TM2D2Q9BX73 214 aa9.08□□□□□ -0.96
HLA-DPA1-243ENST00000437811 IGKV2D-24A0A075B6R9 120 aa9.07□□□□□ -0.96
HLA-DPA1-243ENST00000437811 SRSF9Q13242 221 aaKnown RBP eCLIP9.07□□□□□ -0.96
HLA-DPA1-243ENST00000437811 C6orf226Q5I0X4 101 aa9.07□□□□□ -0.96
HLA-DPA1-243ENST00000437811 SFTA2Q6UW10 78 aa9.07□□□□□ -0.96
HLA-DPA1-243ENST00000437811 MUC7Q8TAX7 377 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms