RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 COX11Q9Y6N1 276 aa10.64□□□□□ -0.71
SGCE-205ENST00000437425 A0A0J9YWU9 116 aa10.63□□□□□ -0.71
SGCE-205ENST00000437425 SMIM13P0DJ93 91 aa10.63□□□□□ -0.71
SGCE-205ENST00000437425 COX6A2Q02221 97 aa10.63□□□□□ -0.71
SGCE-205ENST00000437425 SS18Q15532 418 aa10.63□□□□□ -0.71
SGCE-205ENST00000437425 Q6ZVH6 145 aa10.63□□□□□ -0.71
SGCE-205ENST00000437425 NDUFA12Q9UI09 145 aa10.63□□□□□ -0.71
SGCE-205ENST00000437425 IGHV3-64A0A075B6Q5 118 aa10.63□□□□□ -0.71
SGCE-205ENST00000437425 TRAV8-3A0A0A6YYJ7 113 aa10.63□□□□□ -0.71
SGCE-205ENST00000437425 DEFB121Q5J5C9 76 aa10.63□□□□□ -0.71
SGCE-205ENST00000437425 PKD1L1Q8TDX9 2849 aa10.62□□□□□ -0.71
SGCE-205ENST00000437425 TAX1BP3O14907 124 aa10.62□□□□□ -0.71
SGCE-205ENST00000437425 TIMM17BO60830 172 aa10.62□□□□□ -0.71
SGCE-205ENST00000437425 Q6ZTC4 211 aa10.62□□□□□ -0.71
SGCE-205ENST00000437425 LINC01561Q8N1V8 128 aa10.62□□□□□ -0.71
SGCE-205ENST00000437425 LINC00959A0A1B0GUT2 108 aa10.61□□□□□ -0.71
SGCE-205ENST00000437425 SMIM1B2RUZ4 78 aa10.61□□□□□ -0.71
SGCE-205ENST00000437425 NDUFA1O15239 70 aa10.61□□□□□ -0.71
SGCE-205ENST00000437425 FXYD2P54710 66 aa10.61□□□□□ -0.71
SGCE-205ENST00000437425 SFTA2Q6UW10 78 aa10.61□□□□□ -0.71
SGCE-205ENST00000437425 DEFB131BA0A096LNP1 70 aa10.59□□□□□ -0.71
SGCE-205ENST00000437425 IGHV3OR16-9A0A0B4J2B5 98 aa10.59□□□□□ -0.71
SGCE-205ENST00000437425 A0A0J9YXY3 114 aa10.59□□□□□ -0.71
SGCE-205ENST00000437425 HERV-K104P63124 156 aa10.59□□□□□ -0.71
SGCE-205ENST00000437425 CIRBPQ14011 172 aaKnown RBP10.59□□□□□ -0.71
SGCE-205ENST00000437425 LYPD5Q6UWN5 251 aa10.59□□□□□ -0.71
SGCE-205ENST00000437425 A0A087WZ39 114 aa10.58□□□□□ -0.72
SGCE-205ENST00000437425 C10orf126Q8N4M7 172 aa10.58□□□□□ -0.72
SGCE-205ENST00000437425 TRAV10A0A0B4J240 114 aa10.58□□□□□ -0.72
SGCE-205ENST00000437425 A0A1B0GWB2 263 aa10.58□□□□□ -0.72
SGCE-205ENST00000437425 C9orf118A6NHY6 69 aa10.58□□□□□ -0.72
SGCE-205ENST00000437425 IGHV3-30P01768 117 aa10.58□□□□□ -0.72
SGCE-205ENST00000437425 IGHV3-30-5P0DP03 117 aa10.58□□□□□ -0.72
SGCE-205ENST00000437425 COPS9Q8WXC6 57 aa10.58□□□□□ -0.72
SGCE-205ENST00000437425 NHP2Q9NX24 153 aaKnown RBP10.58□□□□□ -0.72
SGCE-205ENST00000437425 RPL24P83731 157 aaKnown RBP10.57□□□□□ -0.72
SGCE-205ENST00000437425 C15orf53Q8NAA6 179 aa10.57□□□□□ -0.72
SGCE-205ENST00000437425 SPANXDQ9BXN6 97 aa10.57□□□□□ -0.72
SGCE-205ENST00000437425 SPANXCQ9NY87 97 aa10.57□□□□□ -0.72
SGCE-205ENST00000437425 IGKV3OR2-268A0A0C4DH90 116 aa10.56□□□□□ -0.72
SGCE-205ENST00000437425 ANGP03950 147 aaKnown RBP10.56□□□□□ -0.72
SGCE-205ENST00000437425 NANOS2P60321 138 aaKnown RBP10.56□□□□□ -0.72
SGCE-205ENST00000437425 PRB2P02812 416 aaPredicted RBP10.55□□□□□ -0.72
SGCE-205ENST00000437425 IFITM1P13164 125 aa10.55□□□□□ -0.72
SGCE-205ENST00000437425 REG3AQ06141 175 aa10.55□□□□□ -0.72
SGCE-205ENST00000437425 LINC00269Q8N2A0 174 aa10.55□□□□□ -0.72
SGCE-205ENST00000437425 CD164L2Q6UWJ8 174 aa10.54□□□□□ -0.72
SGCE-205ENST00000437425 MRAPQ8TCY5 172 aa10.54□□□□□ -0.72
SGCE-205ENST00000437425 COX7B2Q8TF08 81 aa10.54□□□□□ -0.72
SGCE-205ENST00000437425 Q9H8V8 135 aa10.54□□□□□ -0.72
SGCE-205ENST00000437425 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.53□□□□□ -0.72
SGCE-205ENST00000437425 VAMP3Q15836 100 aa10.53□□□□□ -0.72
SGCE-205ENST00000437425 MIAQ16674 131 aa10.53□□□□□ -0.72
SGCE-205ENST00000437425 ZNF625Q96I27 306 aaPredicted RBP10.53□□□□□ -0.72
SGCE-205ENST00000437425 LITAFQ99732 161 aa10.53□□□□□ -0.72
SGCE-205ENST00000437425 PPDPFQ9H3Y8 114 aa10.53□□□□□ -0.72
SGCE-205ENST00000437425 PRR34Q9NV39 138 aa10.53□□□□□ -0.72
SGCE-205ENST00000437425 TRAV8-4A0A0B4J246 113 aa10.52□□□□□ -0.73
SGCE-205ENST00000437425 K7EP13 123 aa10.52□□□□□ -0.73
SGCE-205ENST00000437425 XCL1P47992 114 aa10.51□□□□□ -0.73
SGCE-205ENST00000437425 RAB37Q96AX2 223 aa10.51□□□□□ -0.73
SGCE-205ENST00000437425 B9D2Q9BPU9 175 aa10.51□□□□□ -0.73
SGCE-205ENST00000437425 COX7A2LO14548 114 aa10.5□□□□□ -0.73
SGCE-205ENST00000437425 UBE2V1Q13404 147 aa10.5□□□□□ -0.73
SGCE-205ENST00000437425 CHCHD10Q8WYQ3 142 aaPredicted RBP10.5□□□□□ -0.73
SGCE-205ENST00000437425 H3BUT2 72 aa10.49□□□□□ -0.73
SGCE-205ENST00000437425 CRPP02741 224 aa10.49□□□□□ -0.73
SGCE-205ENST00000437425 PRSS2P07478 247 aa10.49□□□□□ -0.73
SGCE-205ENST00000437425 FABP2P12104 132 aa10.49□□□□□ -0.73
SGCE-205ENST00000437425 GTF2H5Q6ZYL4 71 aa10.49□□□□□ -0.73
SGCE-205ENST00000437425 C5orf38Q86SI9 138 aa10.49□□□□□ -0.73
SGCE-205ENST00000437425 MUSTN1Q8IVN3 82 aa10.49□□□□□ -0.73
SGCE-205ENST00000437425 Q8IZM0 81 aa10.49□□□□□ -0.73
SGCE-205ENST00000437425 A0A0B4J2C4 111 aa10.48□□□□□ -0.73
SGCE-205ENST00000437425 A0A1W2PPM0 123 aa10.48□□□□□ -0.73
SGCE-205ENST00000437425 APOMO95445 188 aa10.48□□□□□ -0.73
SGCE-205ENST00000437425 CXCL5P42830 114 aa10.48□□□□□ -0.73
SGCE-205ENST00000437425 MEIG1Q5JSS6 88 aa10.48□□□□□ -0.73
SGCE-205ENST00000437425 NOTCH1P46531 2555 aa10.48□□□□□ -0.73
SGCE-205ENST00000437425 K7ERJ3 54 aa10.48□□□□□ -0.73
SGCE-205ENST00000437425 ESRGQ1W209 222 aa10.48□□□□□ -0.73
SGCE-205ENST00000437425 CLPSL2Q6UWE3 100 aa10.48□□□□□ -0.73
SGCE-205ENST00000437425 TOMM7Q9P0U1 55 aa10.48□□□□□ -0.73
SGCE-205ENST00000437425 A4D1N5 150 aa10.47□□□□□ -0.73
SGCE-205ENST00000437425 IGLL5B9A064 214 aa10.47□□□□□ -0.73
SGCE-205ENST00000437425 NHLRC4P0CG21 123 aaPredicted RBP10.47□□□□□ -0.73
SGCE-205ENST00000437425 MALP21145 153 aa10.47□□□□□ -0.73
SGCE-205ENST00000437425 C6orf226Q5I0X4 101 aa10.47□□□□□ -0.73
SGCE-205ENST00000437425 LINC01556Q5JQF7 62 aa10.47□□□□□ -0.73
SGCE-205ENST00000437425 LYRM7Q5U5X0 104 aa10.47□□□□□ -0.73
SGCE-205ENST00000437425 KLK12Q9UKR0 248 aa10.47□□□□□ -0.73
SGCE-205ENST00000437425 IBA57-AS1B1ANH7 110 aa10.46□□□□□ -0.74
SGCE-205ENST00000437425 CFC1BP0CG36 223 aa10.46□□□□□ -0.74
SGCE-205ENST00000437425 CFC1P0CG37 223 aa10.46□□□□□ -0.74
SGCE-205ENST00000437425 ADAMTSL4-AS1Q5T5F5 129 aa10.46□□□□□ -0.74
SGCE-205ENST00000437425 PRO1854Q9UHT4 67 aa10.46□□□□□ -0.74
SGCE-205ENST00000437425 GAGE10A6NGK3 116 aa10.45□□□□□ -0.74
SGCE-205ENST00000437425 MGAM2Q2M2H8 2515 aa10.44□□□□□ -0.74
SGCE-205ENST00000437425 FOXI1Q12951 378 aa10.44□□□□□ -0.74
SGCE-205ENST00000437425 WFDC10BQ8IUB3 73 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms