RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, human

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-208	ENST00000436638	LGALS9B	Q3B8N2	356 aa		4.4	□□□□□ -1.71
ECHDC1-208	ENST00000436638	SUMO4	Q6EEV6	95 aa		4.4	□□□□□ -1.71
ECHDC1-208	ENST00000436638		Q8NAQ8	132 aa		4.4	□□□□□ -1.71
ECHDC1-208	ENST00000436638	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	4.4	□□□□□ -1.71
ECHDC1-208	ENST00000436638	CMYA5	Q8N3K9	4069 aa		4.39	□□□□□ -1.71
ECHDC1-208	ENST00000436638	TRAV9-1	A0A075B6T8	112 aa		4.39	□□□□□ -1.71
ECHDC1-208	ENST00000436638	TRAV8-3	A0A0A6YYJ7	113 aa		4.39	□□□□□ -1.71
ECHDC1-208	ENST00000436638	LGALS3	P17931	250 aa	Known RBP	4.39	□□□□□ -1.71
ECHDC1-208	ENST00000436638	TMEM136	Q6ZRR5	245 aa		4.39	□□□□□ -1.71
ECHDC1-208	ENST00000436638	NOP10	Q9NPE3	64 aa	Known RBP	4.39	□□□□□ -1.71
ECHDC1-208	ENST00000436638	TP53TG3	Q9ULZ0	132 aa		4.39	□□□□□ -1.71
ECHDC1-208	ENST00000436638	LY96	Q9Y6Y9	160 aa		4.39	□□□□□ -1.71
ECHDC1-208	ENST00000436638	TMSB15B	A0A087X1C1	80 aa		4.38	□□□□□ -1.71
ECHDC1-208	ENST00000436638	TRGV1	A0A0A0MS02	117 aa		4.38	□□□□□ -1.71
ECHDC1-208	ENST00000436638	LOC100131303	A0A0U1RQF7	123 aa		4.38	□□□□□ -1.71
ECHDC1-208	ENST00000436638		H0Y9J4	135 aa		4.38	□□□□□ -1.71
ECHDC1-208	ENST00000436638	GNRH2	O43555	120 aa		4.38	□□□□□ -1.71
ECHDC1-208	ENST00000436638	PRM2	P04554	102 aa		4.38	□□□□□ -1.71
ECHDC1-208	ENST00000436638	SMIM13	P0DJ93	91 aa		4.38	□□□□□ -1.71
ECHDC1-208	ENST00000436638	CRIP1	P50238	77 aa		4.38	□□□□□ -1.71
ECHDC1-208	ENST00000436638	MRPS36	P82909	103 aa	Known RBP	4.38	□□□□□ -1.71
ECHDC1-208	ENST00000436638		Q6ZQT7	251 aa		4.38	□□□□□ -1.71
ECHDC1-208	ENST00000436638	SH2D6	Q7Z4S9	175 aa		4.38	□□□□□ -1.71
ECHDC1-208	ENST00000436638	TEN1	Q86WV5	123 aa		4.38	□□□□□ -1.71
ECHDC1-208	ENST00000436638	AMN1	Q8IY45	258 aa		4.38	□□□□□ -1.71
ECHDC1-208	ENST00000436638	C15orf53	Q8NAA6	179 aa		4.38	□□□□□ -1.71
ECHDC1-208	ENST00000436638	KLK5	Q9Y337	293 aa	Predicted RBP	4.38	□□□□□ -1.71
ECHDC1-208	ENST00000436638	TRBV20OR9-2	A0A075B6H5	130 aa		4.37	□□□□□ -1.71
ECHDC1-208	ENST00000436638	TRGV2	A0A075B6R0	118 aa		4.37	□□□□□ -1.71
ECHDC1-208	ENST00000436638	IGKV3D-20	A0A0C4DH25	116 aa		4.37	□□□□□ -1.71
ECHDC1-208	ENST00000436638	IGHV3-16	A0A0C4DH30	117 aa		4.37	□□□□□ -1.71
ECHDC1-208	ENST00000436638	ATOX1	O00244	68 aa		4.37	□□□□□ -1.71
ECHDC1-208	ENST00000436638	DEFB130B	P0DP73	79 aa		4.37	□□□□□ -1.71
ECHDC1-208	ENST00000436638	DEFB130A	P0DP74	79 aa		4.37	□□□□□ -1.71
ECHDC1-208	ENST00000436638	SEC61B	P60468	96 aa	Known RBP	4.37	□□□□□ -1.71
ECHDC1-208	ENST00000436638	SPATA12	Q7Z6I5	190 aa		4.37	□□□□□ -1.71
ECHDC1-208	ENST00000436638	DSCR8	Q96T75	97 aa		4.37	□□□□□ -1.71
ECHDC1-208	ENST00000436638	PRO0461	Q9UI25	63 aa		4.37	□□□□□ -1.71
ECHDC1-208	ENST00000436638	C19orf71	A6NCJ1	209 aa		4.36	□□□□□ -1.71
ECHDC1-208	ENST00000436638		H3BVH4	76 aa		4.36	□□□□□ -1.71
ECHDC1-208	ENST00000436638	IGLV2-8	P01709	118 aa		4.36	□□□□□ -1.71
ECHDC1-208	ENST00000436638	IGKC	P01834	107 aa		4.36	□□□□□ -1.71
ECHDC1-208	ENST00000436638	ARMS2	P0C7Q2	107 aa		4.36	□□□□□ -1.71
ECHDC1-208	ENST00000436638	HTN3	P15516	51 aa		4.36	□□□□□ -1.71
ECHDC1-208	ENST00000436638	NANOS2	P60321	138 aa	Known RBP	4.36	□□□□□ -1.71
ECHDC1-208	ENST00000436638	RPL23	P62829	140 aa	Known RBP	4.36	□□□□□ -1.71
ECHDC1-208	ENST00000436638	PCP2	Q8IVA1	136 aa		4.36	□□□□□ -1.71
ECHDC1-208	ENST00000436638	C11orf72	Q8NBR9	251 aa		4.36	□□□□□ -1.71
ECHDC1-208	ENST00000436638	GTSF1	Q8WW33	167 aa		4.36	□□□□□ -1.71
ECHDC1-208	ENST00000436638	CHCHD5	Q9BSY4	110 aa		4.36	□□□□□ -1.71
ECHDC1-208	ENST00000436638	RPP21	Q9H633	154 aa	Known RBP	4.36	□□□□□ -1.71
ECHDC1-208	ENST00000436638	CELA1	Q9UNI1	258 aa		4.36	□□□□□ -1.71
ECHDC1-208	ENST00000436638	PHLDA3	Q9Y5J5	127 aa		4.36	□□□□□ -1.71
ECHDC1-208	ENST00000436638	VWF	P04275	2813 aa		4.36	□□□□□ -1.71
ECHDC1-208	ENST00000436638	DEFB131B	A0A096LNP1	70 aa		4.35	□□□□□ -1.71
ECHDC1-208	ENST00000436638	TRAV10	A0A0B4J240	114 aa		4.35	□□□□□ -1.71
ECHDC1-208	ENST00000436638	IGHV3OR16-9	A0A0B4J2B5	98 aa		4.35	□□□□□ -1.71
ECHDC1-208	ENST00000436638	TRBV27	A0A0K0K1C4	114 aa		4.35	□□□□□ -1.71
ECHDC1-208	ENST00000436638	hDV102S1	A0JD36	115 aa		4.35	□□□□□ -1.71
ECHDC1-208	ENST00000436638	NUPR2	A6NF83	97 aa		4.35	□□□□□ -1.71
ECHDC1-208	ENST00000436638		M0R381	172 aa		4.35	□□□□□ -1.71
ECHDC1-208	ENST00000436638	ZNF73	O43830	326 aa	Predicted RBP	4.35	□□□□□ -1.71
ECHDC1-208	ENST00000436638	SPINK4	O60575	86 aa		4.35	□□□□□ -1.71
ECHDC1-208	ENST00000436638	HLA-DQA1	P01909	254 aa		4.35	□□□□□ -1.71
ECHDC1-208	ENST00000436638	MP68	P56378	58 aa		4.35	□□□□□ -1.71
ECHDC1-208	ENST00000436638	SRSF9	Q13242	221 aa	Known RBP eCLIP	4.35	□□□□□ -1.71
ECHDC1-208	ENST00000436638	SPANXN1	Q5VSR9	72 aa		4.35	□□□□□ -1.71
ECHDC1-208	ENST00000436638		Q6ZTI0	123 aa		4.35	□□□□□ -1.71
ECHDC1-208	ENST00000436638	MAPKAPK5-AS1	Q8N8E1	139 aa		4.35	□□□□□ -1.71
ECHDC1-208	ENST00000436638	MUC7	Q8TAX7	377 aa		4.35	□□□□□ -1.71
ECHDC1-208	ENST00000436638	TOMM6	Q96B49	74 aa		4.35	□□□□□ -1.71
ECHDC1-208	ENST00000436638	OSTC	Q9NRP0	149 aa		4.35	□□□□□ -1.71
ECHDC1-208	ENST00000436638	IL36B	Q9NZH7	164 aa		4.35	□□□□□ -1.71
ECHDC1-208	ENST00000436638	TRAPPC1	Q9Y5R8	145 aa		4.35	□□□□□ -1.71
ECHDC1-208	ENST00000436638	TRGV4	A0A0C4DH28	118 aa		4.34	□□□□□ -1.71
ECHDC1-208	ENST00000436638		E9PLD3	99 aa		4.34	□□□□□ -1.71
ECHDC1-208	ENST00000436638		F2Z2F3	143 aa		4.34	□□□□□ -1.71
ECHDC1-208	ENST00000436638	C3orf84	H3BNL1	204 aa		4.34	□□□□□ -1.71
ECHDC1-208	ENST00000436638	TCL1B	O95988	128 aa		4.34	□□□□□ -1.71
ECHDC1-208	ENST00000436638	IGHV3-53	P01767	116 aa		4.34	□□□□□ -1.71
ECHDC1-208	ENST00000436638	RNASE3	P12724	160 aa	Known RBP	4.34	□□□□□ -1.71
ECHDC1-208	ENST00000436638	ATP5E	P56381	51 aa	Predicted RBP	4.34	□□□□□ -1.71
ECHDC1-208	ENST00000436638	ZNF876P	Q49A33	203 aa		4.34	□□□□□ -1.71
ECHDC1-208	ENST00000436638	ORMDL2	Q53FV1	153 aa		4.34	□□□□□ -1.71
ECHDC1-208	ENST00000436638	ZC2HC1B	Q5TFG8	222 aa		4.34	□□□□□ -1.71
ECHDC1-208	ENST00000436638	LGALS9C	Q6DKI2	356 aa		4.34	□□□□□ -1.71
ECHDC1-208	ENST00000436638		Q6ZTC4	211 aa		4.34	□□□□□ -1.71
ECHDC1-208	ENST00000436638	LCA10	Q71F78	164 aa		4.34	□□□□□ -1.71
ECHDC1-208	ENST00000436638	FAM19A3	Q7Z5A8	133 aa		4.34	□□□□□ -1.71
ECHDC1-208	ENST00000436638	BAGE3	Q86Y29	109 aa		4.34	□□□□□ -1.71
ECHDC1-208	ENST00000436638	NEXN-AS1	Q8NBZ9	246 aa		4.34	□□□□□ -1.71
ECHDC1-208	ENST00000436638	SCRT2	Q9NQ03	307 aa		4.34	□□□□□ -1.71
ECHDC1-208	ENST00000436638	NOTCH1	P46531	2555 aa		4.33	□□□□□ -1.72
ECHDC1-208	ENST00000436638	LOC389332	A0A1B0GUA5	103 aa		4.33	□□□□□ -1.72
ECHDC1-208	ENST00000436638	LST1	O00453	97 aa		4.33	□□□□□ -1.72
ECHDC1-208	ENST00000436638	SERF1A	O75920	110 aa		4.33	□□□□□ -1.72
ECHDC1-208	ENST00000436638	C3orf79	P0CE67	100 aa		4.33	□□□□□ -1.72
ECHDC1-208	ENST00000436638	CEMP1	Q6PRD7	247 aa	Predicted RBP	4.33	□□□□□ -1.72
ECHDC1-208	ENST00000436638	CEND1	Q8N111	149 aa		4.33	□□□□□ -1.72
ECHDC1-208	ENST00000436638	LINC00612	Q8N6U2	182 aa		4.33	□□□□□ -1.72

Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms