RNA–Protein interactions for RNA: ENST00000435629.5

LINC00993-203, long intergenic non-protein coding RNA 993, humanhuman

TSL 3

Gene LINC00993, Length 425 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00993-203ENST00000435629 SELENOWP63302 87 aa-0.3□□□□□ -2.46
LINC00993-203ENST00000435629 UBE2L3P68036 154 aaKnown RBP-0.3□□□□□ -2.46
LINC00993-203ENST00000435629 SMIM21Q3B7S5 101 aa-0.3□□□□□ -2.46
LINC00993-203ENST00000435629 PP6455Q8WZ26 134 aa-0.3□□□□□ -2.46
LINC00993-203ENST00000435629 ANP32BQ92688 251 aaKnown RBP-0.3□□□□□ -2.46
LINC00993-203ENST00000435629 VAMP8Q9BV40 100 aa-0.3□□□□□ -2.46
LINC00993-203ENST00000435629 CRIPTQ9P021 101 aa-0.3□□□□□ -2.46
LINC00993-203ENST00000435629 TSC2P49815 1807 aa-0.3□□□□□ -2.46
LINC00993-203ENST00000435629 CNOT1A5YKK6 2376 aaKnown RBP-0.3□□□□□ -2.46
LINC00993-203ENST00000435629 EHBP1L1Q8N3D4 1523 aa-0.3□□□□□ -2.46
LINC00993-203ENST00000435629 NINQ8N4C6 2090 aa-0.3□□□□□ -2.46
LINC00993-203ENST00000435629 PCNX1Q96RV3 2341 aa-0.3□□□□□ -2.46
LINC00993-203ENST00000435629 AKAP11Q9UKA4 1901 aa-0.3□□□□□ -2.46
LINC00993-203ENST00000435629 GVINP1Q7Z2Y8 2422 aa-0.3□□□□□ -2.46
LINC00993-203ENST00000435629 ATRQ13535 2644 aa-0.31□□□□□ -2.46
LINC00993-203ENST00000435629 BSNQ9UPA5 3926 aa-0.31□□□□□ -2.46
LINC00993-203ENST00000435629 LAMA5O15230 3695 aa-0.31□□□□□ -2.46
LINC00993-203ENST00000435629 MAPKBP1O60336 1514 aa-0.31□□□□□ -2.46
LINC00993-203ENST00000435629 NAP1L6A6NFF2 107 aa-0.31□□□□□ -2.46
LINC00993-203ENST00000435629 CPSF4LA6NMK7 179 aaKnown RBP-0.31□□□□□ -2.46
LINC00993-203ENST00000435629 M0R129 80 aa-0.31□□□□□ -2.46
LINC00993-203ENST00000435629 TRAPPC2P0DI81 140 aa-0.31□□□□□ -2.46
LINC00993-203ENST00000435629 TRAPPC2BP0DI82 140 aa-0.31□□□□□ -2.46
LINC00993-203ENST00000435629 SNCAP37840 140 aa-0.31□□□□□ -2.46
LINC00993-203ENST00000435629 SEC11AP67812 179 aa-0.31□□□□□ -2.46
LINC00993-203ENST00000435629 C10orf113Q5VZT2 155 aa-0.31□□□□□ -2.46
LINC00993-203ENST00000435629 C5orf38Q86SI9 138 aa-0.31□□□□□ -2.46
LINC00993-203ENST00000435629 C12orf57Q99622 126 aa-0.31□□□□□ -2.46
LINC00993-203ENST00000435629 LINC00846Q9NV44 126 aa-0.31□□□□□ -2.46
LINC00993-203ENST00000435629 PSENENQ9NZ42 101 aa-0.31□□□□□ -2.46
LINC00993-203ENST00000435629 MRC2Q9UBG0 1479 aa-0.31□□□□□ -2.46
LINC00993-203ENST00000435629 KDM5AP29375 1690 aaKnown RBP-0.31□□□□□ -2.46
LINC00993-203ENST00000435629 CSPG4Q6UVK1 2322 aa-0.31□□□□□ -2.46
LINC00993-203ENST00000435629 ABCC5O15440 1437 aa-0.31□□□□□ -2.46
LINC00993-203ENST00000435629 CLIP1P30622 1438 aa-0.31□□□□□ -2.46
LINC00993-203ENST00000435629 PCLOQ9Y6V0 5065 aa-0.31□□□□□ -2.46
LINC00993-203ENST00000435629 MXRA5Q9NR99 2828 aa-0.32□□□□□ -2.46
LINC00993-203ENST00000435629 TANC2Q9HCD6 1990 aa-0.32□□□□□ -2.46
LINC00993-203ENST00000435629 SLIT1O75093 1534 aa-0.32□□□□□ -2.46
LINC00993-203ENST00000435629 LRRC37AA6NMS7 1700 aa-0.32□□□□□ -2.46
LINC00993-203ENST00000435629 CEP152O94986 1710 aa-0.32□□□□□ -2.46
LINC00993-203ENST00000435629 HIVEP1P15822 2718 aa-0.32□□□□□ -2.46
LINC00993-203ENST00000435629 URB1O60287 2271 aaKnown RBP-0.32□□□□□ -2.46
LINC00993-203ENST00000435629 A2ML1A8K2U0 1454 aa-0.32□□□□□ -2.46
LINC00993-203ENST00000435629 TRAV30A0A087WSZ9 112 aa-0.32□□□□□ -2.46
LINC00993-203ENST00000435629 LINC00959A0A1B0GUT2 108 aa-0.32□□□□□ -2.46
LINC00993-203ENST00000435629 FAM24AA6NFZ4 105 aa-0.32□□□□□ -2.46
LINC00993-203ENST00000435629 MIF4GDA9UHW6 222 aaKnown RBP-0.32□□□□□ -2.46
LINC00993-203ENST00000435629 H3BQF6 201 aa-0.32□□□□□ -2.46
LINC00993-203ENST00000435629 CHKB-CPT1BH3BT56 60 aa-0.32□□□□□ -2.46
LINC00993-203ENST00000435629 PITX3O75364 302 aa-0.32□□□□□ -2.46
LINC00993-203ENST00000435629 IGLC1P0CG04 106 aa-0.32□□□□□ -2.46
LINC00993-203ENST00000435629 MT4P47944 62 aa-0.32□□□□□ -2.46
LINC00993-203ENST00000435629 KRTDAPP60985 99 aa-0.32□□□□□ -2.46
LINC00993-203ENST00000435629 DEFB112Q30KQ8 113 aa-0.32□□□□□ -2.46
LINC00993-203ENST00000435629 DPH3Q96FX2 82 aa-0.32□□□□□ -2.46
LINC00993-203ENST00000435629 LINC01600Q96MT4 127 aa-0.32□□□□□ -2.46
LINC00993-203ENST00000435629 SPRR4Q96PI1 79 aa-0.32□□□□□ -2.46
LINC00993-203ENST00000435629 CDC42SE2Q9NRR3 84 aa-0.32□□□□□ -2.46
LINC00993-203ENST00000435629 MUC22E2RYF6 1773 aaPredicted RBP-0.32□□□□□ -2.46
LINC00993-203ENST00000435629 XRN1Q8IZH2 1706 aaKnown RBP-0.33□□□□□ -2.46
LINC00993-203ENST00000435629 ABCC2Q92887 1545 aa-0.33□□□□□ -2.46
LINC00993-203ENST00000435629 PLXNB2O15031 1838 aa-0.33□□□□□ -2.46
LINC00993-203ENST00000435629 NKTRP30414 1462 aaKnown RBP-0.33□□□□□ -2.46
LINC00993-203ENST00000435629 C1orf167Q5SNV9 1468 aa-0.33□□□□□ -2.46
LINC00993-203ENST00000435629 DOPEY1Q5JWR5 2465 aa-0.33□□□□□ -2.46
LINC00993-203ENST00000435629 UBE2D3P61077 147 aa-0.33□□□□□ -2.46
LINC00993-203ENST00000435629 UBE2D2P62837 147 aa-0.33□□□□□ -2.46
LINC00993-203ENST00000435629 RPL38P63173 70 aaKnown RBP-0.33□□□□□ -2.46
LINC00993-203ENST00000435629 CATR1Q13166 79 aa-0.33□□□□□ -2.46
LINC00993-203ENST00000435629 FAM223AQ8IWN6 122 aa-0.33□□□□□ -2.46
LINC00993-203ENST00000435629 TSC22D3Q99576 134 aa-0.33□□□□□ -2.46
LINC00993-203ENST00000435629 CGREF1Q99674 301 aa-0.33□□□□□ -2.46
LINC00993-203ENST00000435629 CDKN2A-AS1Q9UH64 79 aa-0.33□□□□□ -2.46
LINC00993-203ENST00000435629 PRO1854Q9UHT4 67 aa-0.33□□□□□ -2.46
LINC00993-203ENST00000435629 APLNQ9ULZ1 77 aa-0.33□□□□□ -2.46
LINC00993-203ENST00000435629 ARL2-SNX15V9GYD0 113 aa-0.33□□□□□ -2.46
LINC00993-203ENST00000435629 MYH3P11055 1940 aa-0.33□□□□□ -2.46
LINC00993-203ENST00000435629 USH2AO75445 5202 aa-0.33□□□□□ -2.46
LINC00993-203ENST00000435629 XIRP1Q702N8 1843 aaKnown RBP-0.34□□□□□ -2.46
LINC00993-203ENST00000435629 PTPN23Q9H3S7 1636 aa-0.34□□□□□ -2.46
LINC00993-203ENST00000435629 DOCK11Q5JSL3 2073 aa-0.34□□□□□ -2.46
LINC00993-203ENST00000435629 SPTY2D1-AS1A0A0U1RR47 76 aa-0.34□□□□□ -2.46
LINC00993-203ENST00000435629 A0A1B0GU69 56 aa-0.34□□□□□ -2.46
LINC00993-203ENST00000435629 C9orf92A6NGG3 77 aa-0.34□□□□□ -2.46
LINC00993-203ENST00000435629 H3BQ15 152 aa-0.34□□□□□ -2.46
LINC00993-203ENST00000435629 EIF4G3O43432 1585 aaKnown RBP-0.34□□□□□ -2.46
LINC00993-203ENST00000435629 NDUFC1O43677 76 aa-0.34□□□□□ -2.46
LINC00993-203ENST00000435629 ADAMTS12P58397 1594 aa-0.34□□□□□ -2.46
LINC00993-203ENST00000435629 GNG11P61952 73 aa-0.34□□□□□ -2.46
LINC00993-203ENST00000435629 NMSQ5H8A3 153 aa-0.34□□□□□ -2.46
LINC00993-203ENST00000435629 COX6B2Q6YFQ2 88 aa-0.34□□□□□ -2.46
LINC00993-203ENST00000435629 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.34□□□□□ -2.46
LINC00993-203ENST00000435629 ARAP2Q8WZ64 1704 aa-0.34□□□□□ -2.46
LINC00993-203ENST00000435629 ANKRD50Q9ULJ7 1429 aa-0.34□□□□□ -2.46
LINC00993-203ENST00000435629 AP4S1Q9Y587 144 aa-0.34□□□□□ -2.46
LINC00993-203ENST00000435629 MYO7BQ6PIF6 2116 aa-0.34□□□□□ -2.46
LINC00993-203ENST00000435629 ARFGEF1Q9Y6D6 1849 aa-0.34□□□□□ -2.46
LINC00993-203ENST00000435629 DNAJC13O75165 2243 aa-0.34□□□□□ -2.46
LINC00993-203ENST00000435629 PLCE1Q9P212 2302 aa-0.35□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms