RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 IGLV5-39A0A0G2JS06 123 aa13.59□□□□□ -0.23
VRK2-205ENST00000432057 TMEM238LA0A1B0GVL6 79 aa13.59□□□□□ -0.23
VRK2-205ENST00000432057 A0A1W2PPM0 123 aa13.59□□□□□ -0.23
VRK2-205ENST00000432057 A6NJY4 79 aa13.59□□□□□ -0.23
VRK2-205ENST00000432057 SMIM1B2RUZ4 78 aa13.59□□□□□ -0.23
VRK2-205ENST00000432057 ANK2Q01484 3957 aa13.58□□□□□ -0.24
VRK2-205ENST00000432057 SAMD5Q5TGI4 173 aa13.58□□□□□ -0.24
VRK2-205ENST00000432057 TMEM238C9JI98 176 aa13.57□□□□□ -0.24
VRK2-205ENST00000432057 IGLL5B9A064 214 aa13.57□□□□□ -0.24
VRK2-205ENST00000432057 LITAFQ99732 161 aa13.56□□□□□ -0.24
VRK2-205ENST00000432057 TMEM262E9PQX1 116 aa13.55□□□□□ -0.24
VRK2-205ENST00000432057 NDUFA1O15239 70 aa13.55□□□□□ -0.24
VRK2-205ENST00000432057 GAGE10A6NGK3 116 aa13.54□□□□□ -0.24
VRK2-205ENST00000432057 APOMO95445 188 aa13.54□□□□□ -0.24
VRK2-205ENST00000432057 RBX1P62877 108 aa13.54□□□□□ -0.24
VRK2-205ENST00000432057 TEX48A0A1B0GUV7 120 aa13.53□□□□□ -0.24
VRK2-205ENST00000432057 K7EP34 96 aa13.53□□□□□ -0.24
VRK2-205ENST00000432057 FABP2P12104 132 aa13.53□□□□□ -0.24
VRK2-205ENST00000432057 MUSTN1Q8IVN3 82 aa13.53□□□□□ -0.24
VRK2-205ENST00000432057 A0A1B0GUV1 79 aa13.52□□□□□ -0.25
VRK2-205ENST00000432057 ADAMTSL4-AS1Q5T5F5 129 aa13.52□□□□□ -0.25
VRK2-205ENST00000432057 SPCS1Q9Y6A9 102 aa13.52□□□□□ -0.25
VRK2-205ENST00000432057 GTF2H5Q6ZYL4 71 aa13.51□□□□□ -0.25
VRK2-205ENST00000432057 Q9H8V8 135 aa13.51□□□□□ -0.25
VRK2-205ENST00000432057 TENM3Q9P273 2699 aa13.51□□□□□ -0.25
VRK2-205ENST00000432057 MRPL23Q16540 153 aaKnown RBP13.5□□□□□ -0.25
VRK2-205ENST00000432057 PGPEP1Q9NXJ5 209 aa13.5□□□□□ -0.25
VRK2-205ENST00000432057 ICOSQ9Y6W8 199 aa13.5□□□□□ -0.25
VRK2-205ENST00000432057 LINC00959A0A1B0GUT2 108 aa13.5□□□□□ -0.25
VRK2-205ENST00000432057 A4D1N5 150 aa13.5□□□□□ -0.25
VRK2-205ENST00000432057 CFC1BP0CG36 223 aa13.5□□□□□ -0.25
VRK2-205ENST00000432057 CFC1P0CG37 223 aa13.5□□□□□ -0.25
VRK2-205ENST00000432057 CLPSL2Q6UWE3 100 aa13.5□□□□□ -0.25
VRK2-205ENST00000432057 SPANXDQ9BXN6 97 aa13.5□□□□□ -0.25
VRK2-205ENST00000432057 SPANXCQ9NY87 97 aa13.5□□□□□ -0.25
VRK2-205ENST00000432057 NOTCH1P46531 2555 aa13.49□□□□□ -0.25
VRK2-205ENST00000432057 RPL24P83731 157 aaKnown RBP13.48□□□□□ -0.25
VRK2-205ENST00000432057 MIAQ16674 131 aa13.48□□□□□ -0.25
VRK2-205ENST00000432057 Q8N3U1 123 aa13.48□□□□□ -0.25
VRK2-205ENST00000432057 IGHV3OR16-9A0A0B4J2B5 98 aa13.48□□□□□ -0.25
VRK2-205ENST00000432057 ZNF625Q96I27 306 aaPredicted RBP13.48□□□□□ -0.25
VRK2-205ENST00000432057 C11orf68Q9H3H3 251 aaKnown RBP13.48□□□□□ -0.25
VRK2-205ENST00000432057 EIF4EBP3O60516 100 aaPredicted RBP13.47□□□□□ -0.25
VRK2-205ENST00000432057 TIMM17BO60830 172 aa13.47□□□□□ -0.25
VRK2-205ENST00000432057 TSPAN13O95857 204 aa13.47□□□□□ -0.25
VRK2-205ENST00000432057 PRB2P02812 416 aaPredicted RBP13.47□□□□□ -0.25
VRK2-205ENST00000432057 PRSS2P07478 247 aa13.46□□□□□ -0.25
VRK2-205ENST00000432057 NPC2P61916 151 aa13.46□□□□□ -0.25
VRK2-205ENST00000432057 Q6ZTC4 211 aa13.46□□□□□ -0.26
VRK2-205ENST00000432057 DAND5Q8N907 189 aa13.46□□□□□ -0.26
VRK2-205ENST00000432057 MDFIQ99750 246 aa13.46□□□□□ -0.26
VRK2-205ENST00000432057 A0A0J9YWU9 116 aa13.45□□□□□ -0.26
VRK2-205ENST00000432057 C5orf38Q86SI9 138 aa13.45□□□□□ -0.26
VRK2-205ENST00000432057 COX7B2Q8TF08 81 aa13.45□□□□□ -0.26
VRK2-205ENST00000432057 SS18Q15532 418 aa13.44□□□□□ -0.26
VRK2-205ENST00000432057 SH2D6Q7Z4S9 175 aa13.44□□□□□ -0.26
VRK2-205ENST00000432057 A0A087WZ39 114 aa13.44□□□□□ -0.26
VRK2-205ENST00000432057 XCL1P47992 114 aa13.44□□□□□ -0.26
VRK2-205ENST00000432057 LELP1Q5T871 98 aa13.44□□□□□ -0.26
VRK2-205ENST00000432057 LINC00269Q8N2A0 174 aa13.44□□□□□ -0.26
VRK2-205ENST00000432057 TOMM7Q9P0U1 55 aa13.44□□□□□ -0.26
VRK2-205ENST00000432057 NBEAL1Q6ZS30 2694 aa13.42□□□□□ -0.26
VRK2-205ENST00000432057 A0A0U1RRA0 63 aa13.42□□□□□ -0.26
VRK2-205ENST00000432057 ANGP03950 147 aaKnown RBP13.42□□□□□ -0.26
VRK2-205ENST00000432057 PRO1854Q9UHT4 67 aa13.42□□□□□ -0.26
VRK2-205ENST00000432057 A0A0B4J2C4 111 aa13.42□□□□□ -0.26
VRK2-205ENST00000432057 CIRBPQ14011 172 aaKnown RBP13.42□□□□□ -0.26
VRK2-205ENST00000432057 SFTA2Q6UW10 78 aa13.42□□□□□ -0.26
VRK2-205ENST00000432057 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.41□□□□□ -0.26
VRK2-205ENST00000432057 MEIG1Q5JSS6 88 aa13.41□□□□□ -0.26
VRK2-205ENST00000432057 HERV-K104P63124 156 aa13.4□□□□□ -0.26
VRK2-205ENST00000432057 NANOS2P60321 138 aaKnown RBP13.4□□□□□ -0.26
VRK2-205ENST00000432057 KPRPQ5T749 579 aaPredicted RBP13.4□□□□□ -0.26
VRK2-205ENST00000432057 IFITM1P13164 125 aa13.39□□□□□ -0.27
VRK2-205ENST00000432057 REG3AQ06141 175 aa13.39□□□□□ -0.27
VRK2-205ENST00000432057 LYPD5Q6UWN5 251 aa13.39□□□□□ -0.27
VRK2-205ENST00000432057 K7EIL1 84 aa13.38□□□□□ -0.27
VRK2-205ENST00000432057 IGHV3-33P01772 117 aa13.38□□□□□ -0.27
VRK2-205ENST00000432057 LOC107984156A0A0G2JMH3 177 aa13.38□□□□□ -0.27
VRK2-205ENST00000432057 ARL17AQ8IVW1 177 aa13.38□□□□□ -0.27
VRK2-205ENST00000432057 IGLV10-54A0A075B6I4 117 aa13.37□□□□□ -0.27
VRK2-205ENST00000432057 H3BNG1 76 aa13.37□□□□□ -0.27
VRK2-205ENST00000432057 LINC00308Q8TCZ7 52 aa13.37□□□□□ -0.27
VRK2-205ENST00000432057 H7C2G1 150 aa13.36□□□□□ -0.27
VRK2-205ENST00000432057 C11orf45Q8TAV5 145 aa13.36□□□□□ -0.27
VRK2-205ENST00000432057 CHCHD10Q8WYQ3 142 aaPredicted RBP13.36□□□□□ -0.27
VRK2-205ENST00000432057 H3BMG7 143 aa13.35□□□□□ -0.27
VRK2-205ENST00000432057 SOSTDC1Q6X4U4 206 aa13.35□□□□□ -0.27
VRK2-205ENST00000432057 SPATA25Q9BR10 227 aa13.34□□□□□ -0.27
VRK2-205ENST00000432057 ERG28Q9UKR5 140 aa13.34□□□□□ -0.27
VRK2-205ENST00000432057 CD164L2Q6UWJ8 174 aa13.33□□□□□ -0.27
VRK2-205ENST00000432057 MRAPQ8TCY5 172 aa13.33□□□□□ -0.27
VRK2-205ENST00000432057 DEFB131BA0A096LNP1 70 aa13.33□□□□□ -0.28
VRK2-205ENST00000432057 DEFB121Q5J5C9 76 aa13.33□□□□□ -0.28
VRK2-205ENST00000432057 Q1RN00 199 aa13.32□□□□□ -0.28
VRK2-205ENST00000432057 LINC01561Q8N1V8 128 aa13.32□□□□□ -0.28
VRK2-205ENST00000432057 TM2D3Q9BRN9 247 aa13.32□□□□□ -0.28
VRK2-205ENST00000432057 KLK12Q9UKR0 248 aa13.32□□□□□ -0.28
VRK2-205ENST00000432057 COX7A2LO14548 114 aa13.31□□□□□ -0.28
VRK2-205ENST00000432057 PSMB2P49721 201 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms