RNA–Protein interactions for RNA: ENST00000431742.2

CSTF3-202, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 2 BASIC

Gene CSTF3, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-202ENST00000431742 HIST1H2BJP06899 126 aa9.41□□□□□ -0.9
CSTF3-202ENST00000431742 PRSS1P07477 247 aa9.41□□□□□ -0.9
CSTF3-202ENST00000431742 HIST1H2BOP23527 126 aa9.41□□□□□ -0.9
CSTF3-202ENST00000431742 HIST1H2BBP33778 126 aa9.41□□□□□ -0.9
CSTF3-202ENST00000431742 FUSP35637 526 aaKnown RBP eCLIP9.41□□□□□ -0.9
CSTF3-202ENST00000431742 HIST1H2BDP58876 126 aa9.41□□□□□ -0.9
CSTF3-202ENST00000431742 HIST1H2BCP62807 126 aa9.41□□□□□ -0.9
CSTF3-202ENST00000431742 HIST2H2BEQ16778 126 aa9.41□□□□□ -0.9
CSTF3-202ENST00000431742 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.41□□□□□ -0.9
CSTF3-202ENST00000431742 FAM19A3Q7Z5A8 133 aa9.41□□□□□ -0.9
CSTF3-202ENST00000431742 HIST1H2BHQ93079 126 aa9.41□□□□□ -0.9
CSTF3-202ENST00000431742 HIST1H2BNQ99877 126 aa9.41□□□□□ -0.9
CSTF3-202ENST00000431742 HIST1H2BMQ99879 126 aa9.41□□□□□ -0.9
CSTF3-202ENST00000431742 C2orf88Q9BSF0 95 aa9.41□□□□□ -0.9
CSTF3-202ENST00000431742 IGHV3OR16-9A0A0B4J2B5 98 aa9.4□□□□□ -0.9
CSTF3-202ENST00000431742 SERF1AO75920 110 aa9.4□□□□□ -0.9
CSTF3-202ENST00000431742 LORP23490 312 aaPredicted RBP9.4□□□□□ -0.9
CSTF3-202ENST00000431742 LINC00242Q5T6M2 205 aa9.4□□□□□ -0.9
CSTF3-202ENST00000431742 APOBP04114 4563 aaKnown RBP9.39□□□□□ -0.91
CSTF3-202ENST00000431742 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.39□□□□□ -0.91
CSTF3-202ENST00000431742 GVQW2A0A096LPI5 108 aaPredicted RBP9.39□□□□□ -0.91
CSTF3-202ENST00000431742 C16orf90A8MZG2 172 aa9.39□□□□□ -0.91
CSTF3-202ENST00000431742 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.39□□□□□ -0.91
CSTF3-202ENST00000431742 COX7A2LO14548 114 aa9.39□□□□□ -0.91
CSTF3-202ENST00000431742 HSBP1O75506 76 aa9.39□□□□□ -0.91
CSTF3-202ENST00000431742 IGLV5-52A0A0A0MRZ9 124 aa9.38□□□□□ -0.91
CSTF3-202ENST00000431742 IGHV1-58A0A0C4DH39 117 aa9.38□□□□□ -0.91
CSTF3-202ENST00000431742 CFAP161Q6P656 301 aa9.38□□□□□ -0.91
CSTF3-202ENST00000431742 NUPR1O60356 82 aa9.37□□□□□ -0.91
CSTF3-202ENST00000431742 ATP5LO75964 103 aa9.37□□□□□ -0.91
CSTF3-202ENST00000431742 COX6A2Q02221 97 aa9.37□□□□□ -0.91
CSTF3-202ENST00000431742 PMVKQ15126 192 aa9.37□□□□□ -0.91
CSTF3-202ENST00000431742 C5orf38Q86SI9 138 aa9.37□□□□□ -0.91
CSTF3-202ENST00000431742 CST9LQ9H4G1 147 aa9.37□□□□□ -0.91
CSTF3-202ENST00000431742 hDV102S1A0JD36 115 aa9.36□□□□□ -0.91
CSTF3-202ENST00000431742 CNBPP62633 177 aaKnown RBP9.36□□□□□ -0.91
CSTF3-202ENST00000431742 FAM19A2Q8N3H0 131 aa9.36□□□□□ -0.91
CSTF3-202ENST00000431742 A0A087WZ39 114 aa9.35□□□□□ -0.91
CSTF3-202ENST00000431742 A0A0J9YXV3 536 aa9.34□□□□□ -0.91
CSTF3-202ENST00000431742 SLPIP03973 132 aa9.34□□□□□ -0.91
CSTF3-202ENST00000431742 MALP21145 153 aa9.34□□□□□ -0.91
CSTF3-202ENST00000431742 GCSHP23434 173 aa9.34□□□□□ -0.91
CSTF3-202ENST00000431742 KRTAP10-1P60331 282 aa9.34□□□□□ -0.91
CSTF3-202ENST00000431742 SEC11AP67812 179 aa9.34□□□□□ -0.91
CSTF3-202ENST00000431742 HIGD2BQ4VC39 106 aa9.34□□□□□ -0.91
CSTF3-202ENST00000431742 LINC01561Q8N1V8 128 aa9.34□□□□□ -0.91
CSTF3-202ENST00000431742 KIAA1109Q2LD37 5005 aa9.34□□□□□ -0.91
CSTF3-202ENST00000431742 IGHV3-64A0A075B6Q5 118 aa9.33□□□□□ -0.92
CSTF3-202ENST00000431742 IGLV5-45A0A087WSX0 123 aa9.33□□□□□ -0.92
CSTF3-202ENST00000431742 TINCRA0A1B0GVN0 87 aa9.33□□□□□ -0.92
CSTF3-202ENST00000431742 HERVK_113P63121 156 aa9.33□□□□□ -0.92
CSTF3-202ENST00000431742 COA6Q5JTJ3 125 aaKnown RBP9.33□□□□□ -0.92
CSTF3-202ENST00000431742 APOMO95445 188 aa9.32□□□□□ -0.92
CSTF3-202ENST00000431742 C9orf163Q8N9P6 203 aa9.32□□□□□ -0.92
CSTF3-202ENST00000431742 OR10D4PQ8NGN7 298 aa9.32□□□□□ -0.92
CSTF3-202ENST00000431742 IFI27L1Q96BM0 104 aa9.32□□□□□ -0.92
CSTF3-202ENST00000431742 RYR1P21817 5038 aa9.32□□□□□ -0.92
CSTF3-202ENST00000431742 IGLV4-69A0A075B6H9 119 aa9.31□□□□□ -0.92
CSTF3-202ENST00000431742 LEPROTL1O95214 131 aa9.31□□□□□ -0.92
CSTF3-202ENST00000431742 IGLC3P0DOY3 106 aa9.31□□□□□ -0.92
CSTF3-202ENST00000431742 LINC01620Q4KN68 170 aa9.31□□□□□ -0.92
CSTF3-202ENST00000431742 GEMIN7Q9H840 131 aaKnown RBP9.31□□□□□ -0.92
CSTF3-202ENST00000431742 CDKN2A-AS1Q9UH64 79 aa9.31□□□□□ -0.92
CSTF3-202ENST00000431742 HSPG2P98160 4391 aa9.31□□□□□ -0.92
CSTF3-202ENST00000431742 TRAV12-1A0A0B4J245 112 aa9.3□□□□□ -0.92
CSTF3-202ENST00000431742 ZNF561-AS1K7EIQ3 104 aa9.3□□□□□ -0.92
CSTF3-202ENST00000431742 SPAG11BQ08648 103 aa9.3□□□□□ -0.92
CSTF3-202ENST00000431742 ORAOV1Q8WV07 137 aa9.3□□□□□ -0.92
CSTF3-202ENST00000431742 LINC00526Q96FQ7 95 aa9.3□□□□□ -0.92
CSTF3-202ENST00000431742 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.29□□□□□ -0.92
CSTF3-202ENST00000431742 NDUFA6P56556 154 aa9.29□□□□□ -0.92
CSTF3-202ENST00000431742 C2orf48Q96LS8 159 aa9.29□□□□□ -0.92
CSTF3-202ENST00000431742 CHAC1Q9BUX1 264 aa9.29□□□□□ -0.92
CSTF3-202ENST00000431742 KIAA0087Q14695 138 aa9.28□□□□□ -0.92
CSTF3-202ENST00000431742 Q6ZSA8 131 aa9.28□□□□□ -0.92
CSTF3-202ENST00000431742 LINC00469Q8N7U9 141 aa9.28□□□□□ -0.92
CSTF3-202ENST00000431742 PACRGQ96M98 296 aaPredicted RBP9.28□□□□□ -0.92
CSTF3-202ENST00000431742 HSPB8Q9UJY1 196 aa9.28□□□□□ -0.92
CSTF3-202ENST00000431742 C11orf86A6NJI1 115 aa9.27□□□□□ -0.93
CSTF3-202ENST00000431742 SMIM1B2RUZ4 78 aa9.27□□□□□ -0.93
CSTF3-202ENST00000431742 CDK2AP2O75956 126 aa9.27□□□□□ -0.93
CSTF3-202ENST00000431742 CARD19Q96LW7 228 aa9.27□□□□□ -0.93
CSTF3-202ENST00000431742 CHTOPQ9Y3Y2 248 aaKnown RBP9.27□□□□□ -0.93
CSTF3-202ENST00000431742 F8WDY8 70 aa9.26□□□□□ -0.93
CSTF3-202ENST00000431742 FABP4P15090 132 aa9.26□□□□□ -0.93
CSTF3-202ENST00000431742 ZNF22P17026 224 aaPredicted RBP9.26□□□□□ -0.93
CSTF3-202ENST00000431742 SYCNQ0VAF6 134 aa9.26□□□□□ -0.93
CSTF3-202ENST00000431742 HERC2O95714 4834 aa9.25□□□□□ -0.93
CSTF3-202ENST00000431742 F8VRH5 84 aa9.25□□□□□ -0.93
CSTF3-202ENST00000431742 ODF1Q14990 250 aa9.25□□□□□ -0.93
CSTF3-202ENST00000431742 SDIM1Q6ZPB5 146 aa9.25□□□□□ -0.93
CSTF3-202ENST00000431742 Q6ZRU5 148 aa9.25□□□□□ -0.93
CSTF3-202ENST00000431742 CAMK2N2Q96S95 79 aa9.25□□□□□ -0.93
CSTF3-202ENST00000431742 MRPL35Q9NZE8 188 aaKnown RBP9.25□□□□□ -0.93
CSTF3-202ENST00000431742 FAM30AQ9NZY2 134 aa9.25□□□□□ -0.93
CSTF3-202ENST00000431742 Q8IZM0 81 aa9.24□□□□□ -0.93
CSTF3-202ENST00000431742 H3BRM9 83 aa9.23□□□□□ -0.93
CSTF3-202ENST00000431742 SPINK8P0C7L1 97 aa9.23□□□□□ -0.93
CSTF3-202ENST00000431742 IGLV5-39A0A0G2JS06 123 aa9.22□□□□□ -0.93
CSTF3-202ENST00000431742 NDUFA1O15239 70 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms