RNA–Protein interactions for RNA: ENST00000430711.5

COL28A1-202, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 5

Gene COL28A1, Length 2,323 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-202ENST00000430711 ZFAND6Q6FIF0 208 aa5.11□□□□□ -1.59
COL28A1-202ENST00000430711 ESM1Q9NQ30 184 aa5.11□□□□□ -1.59
COL28A1-202ENST00000430711 TRRAPQ9Y4A5 3859 aa5.11□□□□□ -1.59
COL28A1-202ENST00000430711 TRGV1A0A0A0MS02 117 aa5.11□□□□□ -1.59
COL28A1-202ENST00000430711 TINCRA0A1B0GVN0 87 aa5.11□□□□□ -1.59
COL28A1-202ENST00000430711 CIDEAO60543 219 aa5.11□□□□□ -1.59
COL28A1-202ENST00000430711 GIG44P09565 113 aaPredicted RBP5.11□□□□□ -1.59
COL28A1-202ENST00000430711 PIK3CD-AS1Q5SR53 167 aa5.11□□□□□ -1.59
COL28A1-202ENST00000430711 Q9H8V8 135 aa5.11□□□□□ -1.59
COL28A1-202ENST00000430711 EDA2RQ9HAV5 297 aa5.11□□□□□ -1.59
COL28A1-202ENST00000430711 ZNF415Q09FC8 603 aa5.1□□□□□ -1.59
COL28A1-202ENST00000430711 FAM218AQ96MZ4 157 aa5.1□□□□□ -1.59
COL28A1-202ENST00000430711 SPANXDQ9BXN6 97 aa5.1□□□□□ -1.59
COL28A1-202ENST00000430711 SPANXCQ9NY87 97 aa5.1□□□□□ -1.59
COL28A1-202ENST00000430711 C22orf24Q9Y442 160 aa5.1□□□□□ -1.59
COL28A1-202ENST00000430711 TRBV30A0A0K0K1B3 111 aa5.09□□□□□ -1.59
COL28A1-202ENST00000430711 A0A1B0GV72 72 aa5.09□□□□□ -1.59
COL28A1-202ENST00000430711 GAGE12JA6NER3 117 aa5.09□□□□□ -1.59
COL28A1-202ENST00000430711 SMIM1B2RUZ4 78 aa5.09□□□□□ -1.59
COL28A1-202ENST00000430711 RS1O15537 224 aa5.09□□□□□ -1.59
COL28A1-202ENST00000430711 GAGE4Q13068 117 aa5.09□□□□□ -1.59
COL28A1-202ENST00000430711 GAGE5Q13069 117 aa5.09□□□□□ -1.59
COL28A1-202ENST00000430711 PLAC8L1A1L4L8 177 aa5.09□□□□□ -1.59
COL28A1-202ENST00000430711 ATXN8Q156A1 80 aa5.09□□□□□ -1.59
COL28A1-202ENST00000430711 BEAN1Q3B7T3 259 aa5.09□□□□□ -1.59
COL28A1-202ENST00000430711 C9orf129Q5T035 196 aaKnown RBP5.09□□□□□ -1.59
COL28A1-202ENST00000430711 IL17DQ8TAD2 202 aa5.09□□□□□ -1.59
COL28A1-202ENST00000430711 IGKV3OR2-268A0A0C4DH90 116 aa5.08□□□□□ -1.6
COL28A1-202ENST00000430711 TRBV10-2A0A0K0K1G8 114 aa5.08□□□□□ -1.6
COL28A1-202ENST00000430711 F5H768 121 aa5.08□□□□□ -1.6
COL28A1-202ENST00000430711 CCDC179H3BU77 68 aa5.08□□□□□ -1.6
COL28A1-202ENST00000430711 C2orf82Q6UX34 121 aa5.08□□□□□ -1.6
COL28A1-202ENST00000430711 C3orf56Q8N813 242 aa5.08□□□□□ -1.6
COL28A1-202ENST00000430711 LINC00308Q8TCZ7 52 aa5.08□□□□□ -1.6
COL28A1-202ENST00000430711 DYNLRB2Q8TF09 96 aa5.08□□□□□ -1.6
COL28A1-202ENST00000430711 IGLV5-45A0A087WSX0 123 aa5.08□□□□□ -1.6
COL28A1-202ENST00000430711 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.08□□□□□ -1.6
COL28A1-202ENST00000430711 LYRM7Q5U5X0 104 aa5.08□□□□□ -1.6
COL28A1-202ENST00000430711 WFDC11Q8NEX6 87 aa5.08□□□□□ -1.6
COL28A1-202ENST00000430711 C4orf3Q8WVX3 66 aa5.08□□□□□ -1.6
COL28A1-202ENST00000430711 NOP10Q9NPE3 64 aaKnown RBP5.08□□□□□ -1.6
COL28A1-202ENST00000430711 SPANXA1Q9NS26 97 aa5.08□□□□□ -1.6
COL28A1-202ENST00000430711 SS18L2Q9UHA2 77 aa5.08□□□□□ -1.6
COL28A1-202ENST00000430711 NBEAL1Q6ZS30 2694 aa5.07□□□□□ -1.6
COL28A1-202ENST00000430711 IGLV5-39A0A0G2JS06 123 aa5.07□□□□□ -1.6
COL28A1-202ENST00000430711 LST1O00453 97 aa5.07□□□□□ -1.6
COL28A1-202ENST00000430711 NDUFA1O15239 70 aa5.07□□□□□ -1.6
COL28A1-202ENST00000430711 INSP01308 110 aa5.07□□□□□ -1.6
COL28A1-202ENST00000430711 C15orf53Q8NAA6 179 aa5.07□□□□□ -1.6
COL28A1-202ENST00000430711 SMCR5Q8TEV8 140 aa5.07□□□□□ -1.6
COL28A1-202ENST00000430711 UBE2WQ96B02 151 aa5.07□□□□□ -1.6
COL28A1-202ENST00000430711 TRAV8-4A0A0B4J246 113 aa5.07□□□□□ -1.6
COL28A1-202ENST00000430711 RPL35AP18077 110 aaKnown RBP5.07□□□□□ -1.6
COL28A1-202ENST00000430711 ATRQ13535 2644 aa5.07□□□□□ -1.6
COL28A1-202ENST00000430711 PKD1L1Q8TDX9 2849 aa5.06□□□□□ -1.6
COL28A1-202ENST00000430711 IGLV4-60A0A075B6I1 120 aa5.06□□□□□ -1.6
COL28A1-202ENST00000430711 SVIPQ8NHG7 77 aa5.06□□□□□ -1.6
COL28A1-202ENST00000430711 DNAJC9-AS1A6NH13 148 aa5.06□□□□□ -1.6
COL28A1-202ENST00000430711 J3QLI3 93 aa5.06□□□□□ -1.6
COL28A1-202ENST00000430711 GAGE7O76087 117 aa5.06□□□□□ -1.6
COL28A1-202ENST00000430711 GAGE12FP0CL80 117 aa5.06□□□□□ -1.6
COL28A1-202ENST00000430711 GAGE12GP0CL81 117 aa5.06□□□□□ -1.6
COL28A1-202ENST00000430711 GAGE12IP0CL82 117 aa5.06□□□□□ -1.6
COL28A1-202ENST00000430711 ANAPC13Q9BS18 74 aa5.06□□□□□ -1.6
COL28A1-202ENST00000430711 Q9HAA7 133 aa5.06□□□□□ -1.6
COL28A1-202ENST00000430711 B5MCH6 92 aa5.05□□□□□ -1.6
COL28A1-202ENST00000430711 DGAT2L7PQ6IED9 249 aa5.05□□□□□ -1.6
COL28A1-202ENST00000430711 CDC42SE2Q9NRR3 84 aa5.05□□□□□ -1.6
COL28A1-202ENST00000430711 IGKV2-28A0A075B6P5 120 aa5.05□□□□□ -1.6
COL28A1-202ENST00000430711 K7EQD1 137 aa5.05□□□□□ -1.6
COL28A1-202ENST00000430711 IGKV2D-28P01615 120 aa5.05□□□□□ -1.6
COL28A1-202ENST00000430711 NDUFV3P56181 108 aaKnown RBP5.05□□□□□ -1.6
COL28A1-202ENST00000430711 TIRAPP58753 221 aa5.05□□□□□ -1.6
COL28A1-202ENST00000430711 LINC00337Q8N6G1 96 aa5.05□□□□□ -1.6
COL28A1-202ENST00000430711 C11orf68Q9H3H3 251 aaKnown RBP5.05□□□□□ -1.6
COL28A1-202ENST00000430711 DSCR9P59020 149 aa5.04□□□□□ -1.6
COL28A1-202ENST00000430711 GAGE6Q13070 117 aa5.04□□□□□ -1.6
COL28A1-202ENST00000430711 DEFB113Q30KQ7 82 aa5.04□□□□□ -1.6
COL28A1-202ENST00000430711 STHQ8IWL8 128 aa5.04□□□□□ -1.6
COL28A1-202ENST00000430711 TEX29Q8N6K0 151 aa5.04□□□□□ -1.6
COL28A1-202ENST00000430711 LINC01600Q96MT4 127 aa5.04□□□□□ -1.6
COL28A1-202ENST00000430711 PEMTQ9UBM1 199 aa5.04□□□□□ -1.6
COL28A1-202ENST00000430711 M0QXV9 152 aa5.03□□□□□ -1.6
COL28A1-202ENST00000430711 PF4P02776 101 aa5.03□□□□□ -1.6
COL28A1-202ENST00000430711 C19orf73Q9NVV2 129 aa5.03□□□□□ -1.6
COL28A1-202ENST00000430711 STAB1Q9NY15 2570 aa5.03□□□□□ -1.6
COL28A1-202ENST00000430711 CCL24O00175 119 aa5.03□□□□□ -1.6
COL28A1-202ENST00000430711 MEIG1Q5JSS6 88 aa5.03□□□□□ -1.6
COL28A1-202ENST00000430711 CLPSL2Q6UWE3 100 aa5.03□□□□□ -1.6
COL28A1-202ENST00000430711 CHCHD5Q9BSY4 110 aa5.03□□□□□ -1.6
COL28A1-202ENST00000430711 TOMM7Q9P0U1 55 aa5.03□□□□□ -1.6
COL28A1-202ENST00000430711 A0A096LPF7 62 aa5.02□□□□□ -1.61
COL28A1-202ENST00000430711 KRTAP1-1Q07627 177 aa5.02□□□□□ -1.61
COL28A1-202ENST00000430711 GAGE2BQ13066 116 aa5.02□□□□□ -1.61
COL28A1-202ENST00000430711 GAGE2EQ4V326 116 aa5.02□□□□□ -1.61
COL28A1-202ENST00000430711 DNAJC30Q96LL9 226 aa5.02□□□□□ -1.61
COL28A1-202ENST00000430711 GAGE2DQ9UEU5 116 aa5.02□□□□□ -1.61
COL28A1-202ENST00000430711 COL6A5A8TX70 2615 aa5.02□□□□□ -1.61
COL28A1-202ENST00000430711 A0A087WYN8 130 aa5.02□□□□□ -1.61
COL28A1-202ENST00000430711 TIMM17BO60830 172 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms