RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 IGHV1-58A0A0C4DH39 117 aa15.09■□□□□ 0.01
VSX1-205ENST00000429762 H3BRM9 83 aa15.09■□□□□ 0.01
VSX1-205ENST00000429762 SIVA1O15304 175 aa15.09■□□□□ 0.01
VSX1-205ENST00000429762 IGHV3-30P01768 117 aa15.09■□□□□ 0.01
VSX1-205ENST00000429762 IGHV3-33P01772 117 aa15.09■□□□□ 0.01
VSX1-205ENST00000429762 IGHV3-30-5P0DP03 117 aa15.09■□□□□ 0.01
VSX1-205ENST00000429762 SEC11AP67812 179 aa15.09■□□□□ 0.01
VSX1-205ENST00000429762 PRKDCP78527 4128 aaKnown RBP15.08■□□□□ 0
VSX1-205ENST00000429762 IGLL5B9A064 214 aa15.06■□□□□ 0
VSX1-205ENST00000429762 XCL1P47992 114 aa15.06■□□□□ 0
VSX1-205ENST00000429762 SMIM1B2RUZ4 78 aa15.05■□□□□ 0
VSX1-205ENST00000429762 CCL25O15444 150 aa15.05■□□□□ 0
VSX1-205ENST00000429762 STAB2Q8WWQ8 2551 aa15.05■□□□□ -0
VSX1-205ENST00000429762 IGLV10-54A0A075B6I4 117 aa15.05■□□□□ -0
VSX1-205ENST00000429762 REG3AQ06141 175 aa15.05■□□□□ -0
VSX1-205ENST00000429762 BVES-AS1Q5T3Y7 98 aa15.05■□□□□ -0
VSX1-205ENST00000429762 SCGB1D4Q6XE38 83 aa15.05■□□□□ -0
VSX1-205ENST00000429762 HIGD1BQ9P298 99 aa15.05■□□□□ -0
VSX1-205ENST00000429762 KLK12Q9UKR0 248 aa15.05■□□□□ -0
VSX1-205ENST00000429762 MEGF8Q7Z7M0 2845 aa15.04■□□□□ -0
VSX1-205ENST00000429762 SS18Q15532 418 aa15.04■□□□□ -0
VSX1-205ENST00000429762 C5orf38Q86SI9 138 aa15.04■□□□□ -0
VSX1-205ENST00000429762 HSD52Q0P140 79 aa15.03■□□□□ -0
VSX1-205ENST00000429762 IGHV3OR16-9A0A0B4J2B5 98 aa15.02□□□□□ -0.01
VSX1-205ENST00000429762 IGLV5-39A0A0G2JS06 123 aa15.01□□□□□ -0.01
VSX1-205ENST00000429762 C10orf126Q8N4M7 172 aa15.01□□□□□ -0.01
VSX1-205ENST00000429762 C15orf53Q8NAA6 179 aa15.01□□□□□ -0.01
VSX1-205ENST00000429762 NDUFA12Q9UI09 145 aa15□□□□□ -0.01
VSX1-205ENST00000429762 K7EP13 123 aa14.99□□□□□ -0.01
VSX1-205ENST00000429762 GCSHP23434 173 aa14.99□□□□□ -0.01
VSX1-205ENST00000429762 CHCHD10Q8WYQ3 142 aaPredicted RBP14.99□□□□□ -0.01
VSX1-205ENST00000429762 NHLRC4P0CG21 123 aaPredicted RBP14.98□□□□□ -0.01
VSX1-205ENST00000429762 ZFAND6Q6FIF0 208 aa14.98□□□□□ -0.01
VSX1-205ENST00000429762 ENHOQ6UWT2 76 aa14.98□□□□□ -0.01
VSX1-205ENST00000429762 HIST1H4GQ99525 98 aa14.98□□□□□ -0.01
VSX1-205ENST00000429762 LINC00588Q9Y4M8 146 aa14.97□□□□□ -0.01
VSX1-205ENST00000429762 UBE2WQ96B02 151 aa14.96□□□□□ -0.01
VSX1-205ENST00000429762 TOMM7Q9P0U1 55 aa14.96□□□□□ -0.01
VSX1-205ENST00000429762 A0A087WZ39 114 aa14.96□□□□□ -0.01
VSX1-205ENST00000429762 A0A0J9YXY3 114 aa14.96□□□□□ -0.01
VSX1-205ENST00000429762 FXYD2P54710 66 aa14.95□□□□□ -0.02
VSX1-205ENST00000429762 ORAOV1Q8WV07 137 aa14.95□□□□□ -0.02
VSX1-205ENST00000429762 PRR34Q9NV39 138 aa14.95□□□□□ -0.02
VSX1-205ENST00000429762 COL5A1-AS1Q5SY13 56 aa14.94□□□□□ -0.02
VSX1-205ENST00000429762 CEND1Q8N111 149 aa14.94□□□□□ -0.02
VSX1-205ENST00000429762 ZNF625Q96I27 306 aaPredicted RBP14.94□□□□□ -0.02
VSX1-205ENST00000429762 Q9H8V8 135 aa14.94□□□□□ -0.02
VSX1-205ENST00000429762 Q6ZVH6 145 aa14.93□□□□□ -0.02
VSX1-205ENST00000429762 GAGE12HA6NDE8 117 aa14.93□□□□□ -0.02
VSX1-205ENST00000429762 CRPP02741 224 aa14.93□□□□□ -0.02
VSX1-205ENST00000429762 CD164L2Q6UWJ8 174 aa14.93□□□□□ -0.02
VSX1-205ENST00000429762 COX7B2Q8TF08 81 aa14.93□□□□□ -0.02
VSX1-205ENST00000429762 A0A1B0GV90 55 aa14.92□□□□□ -0.02
VSX1-205ENST00000429762 NDUFA1O15239 70 aa14.92□□□□□ -0.02
VSX1-205ENST00000429762 SRSF9Q13242 221 aaKnown RBP eCLIP14.92□□□□□ -0.02
VSX1-205ENST00000429762 LBHQ53QV2 105 aaPredicted RBP14.92□□□□□ -0.02
VSX1-205ENST00000429762 FOXI1Q12951 378 aa14.91□□□□□ -0.02
VSX1-205ENST00000429762 CCL18P55774 89 aa14.9□□□□□ -0.02
VSX1-205ENST00000429762 TAL2Q16559 108 aa14.9□□□□□ -0.02
VSX1-205ENST00000429762 LINC01556Q5JQF7 62 aa14.9□□□□□ -0.02
VSX1-205ENST00000429762 COX7A2LO14548 114 aa14.89□□□□□ -0.03
VSX1-205ENST00000429762 PTTG1IPP53801 180 aa14.89□□□□□ -0.03
VSX1-205ENST00000429762 DYNC2H1Q8NCM8 4307 aaKnown RBP14.88□□□□□ -0.03
VSX1-205ENST00000429762 ADAMTSL4-AS1Q5T5F5 129 aa14.88□□□□□ -0.03
VSX1-205ENST00000429762 LITAFQ99732 161 aa14.88□□□□□ -0.03
VSX1-205ENST00000429762 TM2D2Q9BX73 214 aa14.88□□□□□ -0.03
VSX1-205ENST00000429762 A0A0U1RRA0 63 aa14.87□□□□□ -0.03
VSX1-205ENST00000429762 SPANXB1Q9NS25 103 aaPredicted RBP14.87□□□□□ -0.03
VSX1-205ENST00000429762 K7ERJ3 54 aa14.87□□□□□ -0.03
VSX1-205ENST00000429762 DNAH10OSP0CZ25 163 aa14.86□□□□□ -0.03
VSX1-205ENST00000429762 APLNQ9ULZ1 77 aa14.86□□□□□ -0.03
VSX1-205ENST00000429762 MALP21145 153 aa14.85□□□□□ -0.03
VSX1-205ENST00000429762 DAND5Q8N907 189 aa14.85□□□□□ -0.03
VSX1-205ENST00000429762 CSMD3Q7Z407 3707 aa14.85□□□□□ -0.03
VSX1-205ENST00000429762 NPC2P61916 151 aa14.85□□□□□ -0.03
VSX1-205ENST00000429762 NHP2Q9NX24 153 aaKnown RBP14.85□□□□□ -0.03
VSX1-205ENST00000429762 TMEM238C9JI98 176 aa14.84□□□□□ -0.03
VSX1-205ENST00000429762 TAX1BP3O14907 124 aa14.84□□□□□ -0.03
VSX1-205ENST00000429762 A6NDN8 102 aa14.83□□□□□ -0.04
VSX1-205ENST00000429762 MIAQ16674 131 aa14.83□□□□□ -0.04
VSX1-205ENST00000429762 RAB37Q96AX2 223 aa14.83□□□□□ -0.04
VSX1-205ENST00000429762 LYSTQ99698 3801 aa14.83□□□□□ -0.04
VSX1-205ENST00000429762 Q9HAA7 133 aa14.83□□□□□ -0.04
VSX1-205ENST00000429762 MEIG1Q5JSS6 88 aa14.82□□□□□ -0.04
VSX1-205ENST00000429762 DNAH7Q8WXX0 4024 aa14.82□□□□□ -0.04
VSX1-205ENST00000429762 C6orf226Q5I0X4 101 aa14.82□□□□□ -0.04
VSX1-205ENST00000429762 C2orf82Q6UX34 121 aa14.82□□□□□ -0.04
VSX1-205ENST00000429762 MUSTN1Q8IVN3 82 aa14.82□□□□□ -0.04
VSX1-205ENST00000429762 TRAV8-4A0A0B4J246 113 aa14.81□□□□□ -0.04
VSX1-205ENST00000429762 PRSS2P07478 247 aa14.81□□□□□ -0.04
VSX1-205ENST00000429762 LINC01561Q8N1V8 128 aa14.81□□□□□ -0.04
VSX1-205ENST00000429762 KRTAP26-1Q6PEX3 210 aa14.8□□□□□ -0.04
VSX1-205ENST00000429762 LINC00526Q96FQ7 95 aa14.8□□□□□ -0.04
VSX1-205ENST00000429762 PLECQ15149 4684 aaKnown RBP14.8□□□□□ -0.04
VSX1-205ENST00000429762 SMIM13P0DJ93 91 aa14.8□□□□□ -0.04
VSX1-205ENST00000429762 STARD9Q9P2P6 4700 aa14.79□□□□□ -0.04
VSX1-205ENST00000429762 KIAA0087Q14695 138 aa14.79□□□□□ -0.04
VSX1-205ENST00000429762 Q8IZM0 81 aa14.79□□□□□ -0.04
VSX1-205ENST00000429762 NAA38Q9BRA0 125 aaKnown RBP14.79□□□□□ -0.04
VSX1-205ENST00000429762 IGKV2D-24A0A075B6R9 120 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms