RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 KLK9Q9UKQ9 250 aa6.32□□□□□ -1.4
CDC42BPA-206ENST00000429440 SPTBN4Q9H254 2564 aa6.32□□□□□ -1.4
CDC42BPA-206ENST00000429440 ZFHX3Q15911 3703 aa6.32□□□□□ -1.4
CDC42BPA-206ENST00000429440 IGHV3-35A0A0C4DH35 117 aa6.32□□□□□ -1.4
CDC42BPA-206ENST00000429440 GRNP28799 593 aaKnown RBP6.32□□□□□ -1.4
CDC42BPA-206ENST00000429440 FUSP35637 526 aaKnown RBP eCLIP6.32□□□□□ -1.4
CDC42BPA-206ENST00000429440 LINC01547P58512 204 aaPredicted RBP6.32□□□□□ -1.4
CDC42BPA-206ENST00000429440 IGKV2-28A0A075B6P5 120 aa6.31□□□□□ -1.4
CDC42BPA-206ENST00000429440 LYRM9A8MSI8 78 aa6.31□□□□□ -1.4
CDC42BPA-206ENST00000429440 LYNX1G3V0Z9 82 aa6.31□□□□□ -1.4
CDC42BPA-206ENST00000429440 TMEM256-PLSCR3K7ERE1 68 aa6.31□□□□□ -1.4
CDC42BPA-206ENST00000429440 IGKV2D-28P01615 120 aa6.31□□□□□ -1.4
CDC42BPA-206ENST00000429440 LYNX1P0DP58 116 aa6.31□□□□□ -1.4
CDC42BPA-206ENST00000429440 RPL36AP83881 106 aaKnown RBP6.31□□□□□ -1.4
CDC42BPA-206ENST00000429440 PRB3Q04118 309 aaPredicted RBP6.31□□□□□ -1.4
CDC42BPA-206ENST00000429440 RPL36ALQ969Q0 106 aaKnown RBP6.31□□□□□ -1.4
CDC42BPA-206ENST00000429440 A0A087WZ39 114 aa6.31□□□□□ -1.4
CDC42BPA-206ENST00000429440 KLLNB2CW77 178 aa6.3□□□□□ -1.4
CDC42BPA-206ENST00000429440 LINC01560Q8TB33 94 aa6.3□□□□□ -1.4
CDC42BPA-206ENST00000429440 ITPR1Q14643 2758 aa6.3□□□□□ -1.4
CDC42BPA-206ENST00000429440 RNASE13Q5GAN3 156 aaKnown RBP6.3□□□□□ -1.4
CDC42BPA-206ENST00000429440 FAM19A3Q7Z5A8 133 aa6.3□□□□□ -1.4
CDC42BPA-206ENST00000429440 IGHV3OR16-13A0A075B7E8 117 aa6.29□□□□□ -1.4
CDC42BPA-206ENST00000429440 IGHV3-74A0A0B4J1X5 117 aa6.29□□□□□ -1.4
CDC42BPA-206ENST00000429440 hDV103S1A0JD37 113 aa6.29□□□□□ -1.4
CDC42BPA-206ENST00000429440 PRYO14603 147 aa6.29□□□□□ -1.4
CDC42BPA-206ENST00000429440 NREPQ16612 68 aa6.29□□□□□ -1.4
CDC42BPA-206ENST00000429440 FBXL19-AS1Q494R0 122 aa6.29□□□□□ -1.4
CDC42BPA-206ENST00000429440 Q8N3U1 123 aa6.29□□□□□ -1.4
CDC42BPA-206ENST00000429440 SND1-IT1Q9HBX3 110 aa6.29□□□□□ -1.4
CDC42BPA-206ENST00000429440 Q6ZRP5 223 aa6.29□□□□□ -1.4
CDC42BPA-206ENST00000429440 CHD8Q9HCK8 2581 aa6.29□□□□□ -1.4
CDC42BPA-206ENST00000429440 SLPIP03973 132 aa6.28□□□□□ -1.4
CDC42BPA-206ENST00000429440 NCOR2Q9Y618 2525 aa6.28□□□□□ -1.4
CDC42BPA-206ENST00000429440 IGHV3-16A0A0C4DH30 117 aa6.28□□□□□ -1.4
CDC42BPA-206ENST00000429440 SMIM1B2RUZ4 78 aa6.28□□□□□ -1.4
CDC42BPA-206ENST00000429440 C19orf54Q5BKX5 351 aa6.28□□□□□ -1.4
CDC42BPA-206ENST00000429440 CHCHD7Q9BUK0 85 aa6.28□□□□□ -1.4
CDC42BPA-206ENST00000429440 LINC00588Q9Y4M8 146 aa6.28□□□□□ -1.4
CDC42BPA-206ENST00000429440 VPS13CQ709C8 3753 aa6.27□□□□□ -1.41
CDC42BPA-206ENST00000429440 LOC110117498A0A087WWA1 95 aa6.27□□□□□ -1.41
CDC42BPA-206ENST00000429440 IGHV3-38A0A0C4DH36 116 aa6.27□□□□□ -1.41
CDC42BPA-206ENST00000429440 UBE2E2Q96LR5 201 aa6.27□□□□□ -1.41
CDC42BPA-206ENST00000429440 HIVEP3Q5T1R4 2406 aa6.27□□□□□ -1.41
CDC42BPA-206ENST00000429440 SPTBN1Q01082 2364 aaKnown RBP6.27□□□□□ -1.41
CDC42BPA-206ENST00000429440 NDUFS5O43920 106 aa6.27□□□□□ -1.41
CDC42BPA-206ENST00000429440 LY6HO94772 140 aa6.27□□□□□ -1.41
CDC42BPA-206ENST00000429440 COL6A6A6NMZ7 2263 aa6.27□□□□□ -1.41
CDC42BPA-206ENST00000429440 IGHV1OR15-1A0A075B7D0 117 aa6.26□□□□□ -1.41
CDC42BPA-206ENST00000429440 IGHV3-49A0A0A0MS15 119 aa6.26□□□□□ -1.41
CDC42BPA-206ENST00000429440 UBE2BP63146 152 aa6.26□□□□□ -1.41
CDC42BPA-206ENST00000429440 COX6A2Q02221 97 aa6.26□□□□□ -1.41
CDC42BPA-206ENST00000429440 Q6ZQT0 140 aa6.26□□□□□ -1.41
CDC42BPA-206ENST00000429440 Q6ZVQ6 151 aa6.26□□□□□ -1.41
CDC42BPA-206ENST00000429440 DPM3Q9P2X0 92 aa6.26□□□□□ -1.41
CDC42BPA-206ENST00000429440 M0R378 163 aa6.26□□□□□ -1.41
CDC42BPA-206ENST00000429440 COX7A1P24310 79 aa6.26□□□□□ -1.41
CDC42BPA-206ENST00000429440 HAMPP81172 84 aa6.26□□□□□ -1.41
CDC42BPA-206ENST00000429440 LINC00242Q5T6M2 205 aa6.26□□□□□ -1.41
CDC42BPA-206ENST00000429440 Q6ZTI0 123 aa6.26□□□□□ -1.41
CDC42BPA-206ENST00000429440 Q8N6K4 173 aa6.26□□□□□ -1.41
CDC42BPA-206ENST00000429440 C11orf45Q8TAV5 145 aa6.26□□□□□ -1.41
CDC42BPA-206ENST00000429440 LY6G6DO95868 133 aa6.25□□□□□ -1.41
CDC42BPA-206ENST00000429440 APOC4P55056 127 aa6.25□□□□□ -1.41
CDC42BPA-206ENST00000429440 CLEC19AQ6UXS0 136 aa6.25□□□□□ -1.41
CDC42BPA-206ENST00000429440 BBC3Q96PG8 261 aaPredicted RBP6.25□□□□□ -1.41
CDC42BPA-206ENST00000429440 MED13LQ71F56 2210 aa6.24□□□□□ -1.41
CDC42BPA-206ENST00000429440 C11orf71Q6IPW1 123 aa6.24□□□□□ -1.41
CDC42BPA-206ENST00000429440 Q8N814 137 aa6.24□□□□□ -1.41
CDC42BPA-206ENST00000429440 IGHV3OR16-12A0A075B7B8 117 aa6.24□□□□□ -1.41
CDC42BPA-206ENST00000429440 BPY2O14599 106 aa6.24□□□□□ -1.41
CDC42BPA-206ENST00000429440 PDE6GP18545 87 aa6.24□□□□□ -1.41
CDC42BPA-206ENST00000429440 PHF5AQ7RTV0 110 aaKnown RBP6.24□□□□□ -1.41
CDC42BPA-206ENST00000429440 CELSR1Q9NYQ6 3014 aa6.24□□□□□ -1.41
CDC42BPA-206ENST00000429440 TRAV22A0A0B4J277 110 aa6.23□□□□□ -1.41
CDC42BPA-206ENST00000429440 IGHV7-81A0A0B4J1V7 117 aa6.23□□□□□ -1.41
CDC42BPA-206ENST00000429440 A0A1W2PPR1 153 aa6.23□□□□□ -1.41
CDC42BPA-206ENST00000429440 K7EQG2 157 aa6.23□□□□□ -1.41
CDC42BPA-206ENST00000429440 DEFB1P60022 68 aa6.23□□□□□ -1.41
CDC42BPA-206ENST00000429440 LINC00467Q9BRT7 94 aa6.23□□□□□ -1.41
CDC42BPA-206ENST00000429440 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.22□□□□□ -1.41
CDC42BPA-206ENST00000429440 TRBV10-1A0A0K0K1A3 114 aa6.22□□□□□ -1.41
CDC42BPA-206ENST00000429440 CCL18P55774 89 aa6.22□□□□□ -1.41
CDC42BPA-206ENST00000429440 DGAT2L7PQ6IED9 249 aa6.22□□□□□ -1.41
CDC42BPA-206ENST00000429440 SYCNQ0VAF6 134 aa6.22□□□□□ -1.41
CDC42BPA-206ENST00000429440 OCR1Q9BZK8 76 aa6.22□□□□□ -1.41
CDC42BPA-206ENST00000429440 ODF3BA8MYP8 253 aa6.21□□□□□ -1.42
CDC42BPA-206ENST00000429440 MINOS1Q5TGZ0 78 aa6.21□□□□□ -1.42
CDC42BPA-206ENST00000429440 BAHCC1Q9P281 2608 aa6.21□□□□□ -1.42
CDC42BPA-206ENST00000429440 COL12A1Q99715 3063 aa6.21□□□□□ -1.42
CDC42BPA-206ENST00000429440 TRBV6-4A0A1B0GX49 114 aa6.21□□□□□ -1.42
CDC42BPA-206ENST00000429440 PSPHP1O15172 72 aa6.21□□□□□ -1.42
CDC42BPA-206ENST00000429440 C9orf66Q5T8R8 295 aa6.21□□□□□ -1.42
CDC42BPA-206ENST00000429440 CACNA1BQ00975 2339 aa6.21□□□□□ -1.42
CDC42BPA-206ENST00000429440 AKAP6Q13023 2319 aa6.21□□□□□ -1.42
CDC42BPA-206ENST00000429440 PKD1L2Q7Z442 2459 aa6.2□□□□□ -1.42
CDC42BPA-206ENST00000429440 GNLYP22749 145 aa6.2□□□□□ -1.42
CDC42BPA-206ENST00000429440 CFAP46Q8IYW2 2715 aa6.2□□□□□ -1.42
CDC42BPA-206ENST00000429440 NTM-AS1Q6ZSK4 140 aa6.2□□□□□ -1.42
CDC42BPA-206ENST00000429440 C1orf64Q8NEQ6 169 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms