RNA–Protein interactions for RNA: ENST00000428950.2

CCDC144A-208, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 5

Gene CCDC144A, Length 780 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-208ENST00000428950 DSPP15924 2871 aaKnown RBP-0.72□□□□□ -2.53
CCDC144A-208ENST00000428950 PKHD1L1Q86WI1 4243 aa-0.72□□□□□ -2.53
CCDC144A-208ENST00000428950 FMN2Q9NZ56 1722 aa-0.72□□□□□ -2.53
CCDC144A-208ENST00000428950 NSD3Q9BZ95 1437 aa-0.72□□□□□ -2.53
CCDC144A-208ENST00000428950 ANK3Q12955 4377 aaKnown RBP-0.73□□□□□ -2.53
CCDC144A-208ENST00000428950 IQSEC2Q5JU85 1478 aa-0.73□□□□□ -2.53
CCDC144A-208ENST00000428950 ARHGEF12Q9NZN5 1544 aa-0.73□□□□□ -2.53
CCDC144A-208ENST00000428950 LOC105371267A0A1B0GV96 52 aa-0.73□□□□□ -2.53
CCDC144A-208ENST00000428950 F8VRH5 84 aa-0.73□□□□□ -2.53
CCDC144A-208ENST00000428950 COX17Q14061 63 aa-0.73□□□□□ -2.53
CCDC144A-208ENST00000428950 SMCO1Q147U7 214 aa-0.73□□□□□ -2.53
CCDC144A-208ENST00000428950 COPZ2Q9P299 210 aa-0.73□□□□□ -2.53
CCDC144A-208ENST00000428950 CFTRP13569 1480 aa-0.73□□□□□ -2.53
CCDC144A-208ENST00000428950 IGLC7A0M8Q6 106 aa-0.74□□□□□ -2.53
CCDC144A-208ENST00000428950 M0R2T5 61 aa-0.74□□□□□ -2.53
CCDC144A-208ENST00000428950 UQCR11O14957 56 aa-0.74□□□□□ -2.53
CCDC144A-208ENST00000428950 TNFP01375 233 aa-0.74□□□□□ -2.53
CCDC144A-208ENST00000428950 LZICQ8WZA0 190 aa-0.74□□□□□ -2.53
CCDC144A-208ENST00000428950 PDCD10Q9BUL8 212 aa-0.74□□□□□ -2.53
CCDC144A-208ENST00000428950 COL12A1Q99715 3063 aa-0.74□□□□□ -2.53
CCDC144A-208ENST00000428950 GAPVD1Q14C86 1478 aa-0.74□□□□□ -2.53
CCDC144A-208ENST00000428950 KIAA0556O60303 1618 aa-0.75□□□□□ -2.53
CCDC144A-208ENST00000428950 SCN7AQ01118 1682 aa-0.75□□□□□ -2.53
CCDC144A-208ENST00000428950 UNC13AQ9UPW8 1703 aa-0.75□□□□□ -2.53
CCDC144A-208ENST00000428950 TRBV7-3A0A075B6L6 115 aa-0.75□□□□□ -2.53
CCDC144A-208ENST00000428950 LINC00959A0A1B0GUT2 108 aa-0.75□□□□□ -2.53
CCDC144A-208ENST00000428950 HMGN4O00479 90 aa-0.75□□□□□ -2.53
CCDC144A-208ENST00000428950 SPRR2AP35326 72 aa-0.75□□□□□ -2.53
CCDC144A-208ENST00000428950 DEFB105AQ8NG35 78 aa-0.75□□□□□ -2.53
CCDC144A-208ENST00000428950 FXYD6Q9H0Q3 95 aa-0.75□□□□□ -2.53
CCDC144A-208ENST00000428950 CCDC167Q9P0B6 97 aa-0.75□□□□□ -2.53
CCDC144A-208ENST00000428950 TET3O43151 1660 aa-0.75□□□□□ -2.53
CCDC144A-208ENST00000428950 QRICH2Q9H0J4 1663 aa-0.75□□□□□ -2.53
CCDC144A-208ENST00000428950 TPPP2P59282 170 aa-0.76□□□□□ -2.53
CCDC144A-208ENST00000428950 MAFIPQ8WZ33 124 aa-0.76□□□□□ -2.53
CCDC144A-208ENST00000428950 TCEAL4Q96EI5 215 aa-0.76□□□□□ -2.53
CCDC144A-208ENST00000428950 SPRR4Q96PI1 79 aa-0.76□□□□□ -2.53
CCDC144A-208ENST00000428950 MGST2Q99735 147 aa-0.76□□□□□ -2.53
CCDC144A-208ENST00000428950 DYNLRB1Q9NP97 96 aa-0.76□□□□□ -2.53
CCDC144A-208ENST00000428950 SERP1Q9Y6X1 66 aa-0.76□□□□□ -2.53
CCDC144A-208ENST00000428950 HMGXB3Q12766 1538 aa-0.76□□□□□ -2.53
CCDC144A-208ENST00000428950 REV3LO60673 3130 aa-0.77□□□□□ -2.53
CCDC144A-208ENST00000428950 PAPPA2Q9BXP8 1791 aa-0.77□□□□□ -2.53
CCDC144A-208ENST00000428950 MBD5Q9P267 1494 aa-0.77□□□□□ -2.53
CCDC144A-208ENST00000428950 CPSF1Q10570 1443 aaKnown RBP-0.77□□□□□ -2.53
CCDC144A-208ENST00000428950 SFT2D2O95562 160 aa-0.77□□□□□ -2.53
CCDC144A-208ENST00000428950 APOC3P02656 99 aa-0.77□□□□□ -2.53
CCDC144A-208ENST00000428950 SPRR2EP22531 72 aa-0.77□□□□□ -2.53
CCDC144A-208ENST00000428950 C12orf73Q69YU5 71 aa-0.77□□□□□ -2.53
CCDC144A-208ENST00000428950 RERGLQ9H628 205 aa-0.77□□□□□ -2.53
CCDC144A-208ENST00000428950 LINC00474Q9P2X8 69 aa-0.77□□□□□ -2.53
CCDC144A-208ENST00000428950 CELSR3Q9NYQ7 3312 aa-0.77□□□□□ -2.53
CCDC144A-208ENST00000428950 MARF1Q9Y4F3 1742 aaKnown RBP-0.78□□□□□ -2.53
CCDC144A-208ENST00000428950 POLA1P09884 1462 aaPredicted RBP-0.78□□□□□ -2.53
CCDC144A-208ENST00000428950 MAGI1Q96QZ7 1491 aaPredicted RBP-0.78□□□□□ -2.53
CCDC144A-208ENST00000428950 SHANK2Q9UPX8 1470 aa-0.78□□□□□ -2.53
CCDC144A-208ENST00000428950 SPINK4O60575 86 aa-0.78□□□□□ -2.53
CCDC144A-208ENST00000428950 ARPC4P59998 168 aa-0.78□□□□□ -2.53
CCDC144A-208ENST00000428950 C10orf113Q5VZT2 155 aa-0.78□□□□□ -2.53
CCDC144A-208ENST00000428950 SNRNP25Q9BV90 132 aaKnown RBP-0.78□□□□□ -2.53
CCDC144A-208ENST00000428950 SPANXDQ9BXN6 97 aa-0.78□□□□□ -2.53
CCDC144A-208ENST00000428950 PRRC2CQ9Y520 2896 aaKnown RBP-0.78□□□□□ -2.53
CCDC144A-208ENST00000428950 LYSTQ99698 3801 aa-0.78□□□□□ -2.53
CCDC144A-208ENST00000428950 NUP188Q5SRE5 1749 aa-0.78□□□□□ -2.53
CCDC144A-208ENST00000428950 USP9XQ93008 2570 aaPredicted RBP-0.79□□□□□ -2.54
CCDC144A-208ENST00000428950 NBASA2RRP1 2371 aa-0.79□□□□□ -2.54
CCDC144A-208ENST00000428950 WDR87Q6ZQQ6 2873 aa-0.79□□□□□ -2.54
CCDC144A-208ENST00000428950 TRBV7-4A0A0J9YYF1 115 aa-0.79□□□□□ -2.54
CCDC144A-208ENST00000428950 LOC100130705A0A1B0GUX0 176 aa-0.79□□□□□ -2.54
CCDC144A-208ENST00000428950 MEIG1Q5JSS6 88 aa-0.79□□□□□ -2.54
CCDC144A-208ENST00000428950 FASNP49327 2511 aaKnown RBP-0.79□□□□□ -2.54
CCDC144A-208ENST00000428950 AKAP13Q12802 2813 aa-0.79□□□□□ -2.54
CCDC144A-208ENST00000428950 ANKRD36A6QL64 1941 aa-0.79□□□□□ -2.54
CCDC144A-208ENST00000428950 MYO18BQ8IUG5 2567 aa-0.8□□□□□ -2.54
CCDC144A-208ENST00000428950 PIGBOS1A0A0B4J2F0 54 aa-0.8□□□□□ -2.54
CCDC144A-208ENST00000428950 GNG7O60262 68 aa-0.8□□□□□ -2.54
CCDC144A-208ENST00000428950 IGLC1P0CG04 106 aa-0.8□□□□□ -2.54
CCDC144A-208ENST00000428950 MRPL54Q6P161 138 aaKnown RBP-0.8□□□□□ -2.54
CCDC144A-208ENST00000428950 MYOZ3Q8TDC0 251 aa-0.8□□□□□ -2.54
CCDC144A-208ENST00000428950 TMEM263Q8WUH6 116 aaKnown RBP-0.8□□□□□ -2.54
CCDC144A-208ENST00000428950 LCN9Q8WX39 176 aa-0.8□□□□□ -2.54
CCDC144A-208ENST00000428950 LINC00470Q9BZP3 86 aa-0.8□□□□□ -2.54
CCDC144A-208ENST00000428950 CDC42SE2Q9NRR3 84 aa-0.8□□□□□ -2.54
CCDC144A-208ENST00000428950 CUBNO60494 3623 aa-0.8□□□□□ -2.54
CCDC144A-208ENST00000428950 DYNC1H1Q14204 4646 aaKnown RBP-0.8□□□□□ -2.54
CCDC144A-208ENST00000428950 NIPBLQ6KC79 2804 aaeCLIP-0.8□□□□□ -2.54
CCDC144A-208ENST00000428950 SMG6Q86US8 1419 aaKnown RBP-0.81□□□□□ -2.54
CCDC144A-208ENST00000428950 CUL7Q14999 1698 aa-0.81□□□□□ -2.54
CCDC144A-208ENST00000428950 HTTP42858 3142 aa-0.81□□□□□ -2.54
CCDC144A-208ENST00000428950 MIF4GDA9UHW6 222 aaKnown RBP-0.81□□□□□ -2.54
CCDC144A-208ENST00000428950 PFDN5Q99471 154 aa-0.81□□□□□ -2.54
CCDC144A-208ENST00000428950 XRN1Q8IZH2 1706 aaKnown RBP-0.81□□□□□ -2.54
CCDC144A-208ENST00000428950 APOBP04114 4563 aaKnown RBP-0.81□□□□□ -2.54
CCDC144A-208ENST00000428950 TACC2O95359 2948 aa-0.82□□□□□ -2.54
CCDC144A-208ENST00000428950 CMYA5Q8N3K9 4069 aa-0.82□□□□□ -2.54
CCDC144A-208ENST00000428950 CHKB-CPT1BH3BT56 60 aa-0.82□□□□□ -2.54
CCDC144A-208ENST00000428950 MGPP08493 103 aa-0.82□□□□□ -2.54
CCDC144A-208ENST00000428950 BTG2P78543 158 aa-0.82□□□□□ -2.54
CCDC144A-208ENST00000428950 CATR1Q13166 79 aa-0.82□□□□□ -2.54
CCDC144A-208ENST00000428950 Q56UQ5 140 aa-0.82□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms