RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 TMEM238C9JI98 176 aa15.12■□□□□ 0.01
CNEP1R1-202ENST00000427478 TMEM262E9PQX1 116 aa15.11■□□□□ 0.01
CNEP1R1-202ENST00000427478 IGLV5-39A0A0G2JS06 123 aa15.1■□□□□ 0.01
CNEP1R1-202ENST00000427478 GAGE10A6NGK3 116 aa15.1■□□□□ 0.01
CNEP1R1-202ENST00000427478 IGLL5B9A064 214 aa15.1■□□□□ 0.01
CNEP1R1-202ENST00000427478 MAST4O15021 2626 aa15.08■□□□□ 0.01
CNEP1R1-202ENST00000427478 APOMO95445 188 aa15.08■□□□□ 0.01
CNEP1R1-202ENST00000427478 FABP2P12104 132 aa15.08■□□□□ 0.01
CNEP1R1-202ENST00000427478 LITAFQ99732 161 aa15.08■□□□□ 0.01
CNEP1R1-202ENST00000427478 PKD1L1Q8TDX9 2849 aa15.08■□□□□ 0
CNEP1R1-202ENST00000427478 K7EP34 96 aa15.07■□□□□ 0
CNEP1R1-202ENST00000427478 NDUFA1O15239 70 aa15.07■□□□□ 0
CNEP1R1-202ENST00000427478 RBX1P62877 108 aa15.07■□□□□ 0
CNEP1R1-202ENST00000427478 SPCS1Q9Y6A9 102 aa15.07■□□□□ 0
CNEP1R1-202ENST00000427478 TEX48A0A1B0GUV7 120 aa15.07■□□□□ 0
CNEP1R1-202ENST00000427478 GTF2H5Q6ZYL4 71 aa15.07■□□□□ 0
CNEP1R1-202ENST00000427478 MUSTN1Q8IVN3 82 aa15.07■□□□□ 0
CNEP1R1-202ENST00000427478 A0A1B0GUV1 79 aa15.05■□□□□ -0
CNEP1R1-202ENST00000427478 ADAMTSL4-AS1Q5T5F5 129 aa15.05■□□□□ -0
CNEP1R1-202ENST00000427478 Q9H8V8 135 aa15.05■□□□□ -0
CNEP1R1-202ENST00000427478 A4D1N5 150 aa15.04■□□□□ -0
CNEP1R1-202ENST00000427478 PGPEP1Q9NXJ5 209 aa15.04■□□□□ -0
CNEP1R1-202ENST00000427478 CFC1BP0CG36 223 aa15.04■□□□□ -0
CNEP1R1-202ENST00000427478 CFC1P0CG37 223 aa15.04■□□□□ -0
CNEP1R1-202ENST00000427478 MRPL23Q16540 153 aaKnown RBP15.04■□□□□ -0
CNEP1R1-202ENST00000427478 LINC00959A0A1B0GUT2 108 aa15.03■□□□□ -0
CNEP1R1-202ENST00000427478 ICOSQ9Y6W8 199 aa15.03■□□□□ -0
CNEP1R1-202ENST00000427478 RPL24P83731 157 aaKnown RBP15.02■□□□□ -0
CNEP1R1-202ENST00000427478 CLPSL2Q6UWE3 100 aa15.02■□□□□ -0
CNEP1R1-202ENST00000427478 SPANXDQ9BXN6 97 aa15.02■□□□□ -0
CNEP1R1-202ENST00000427478 SPANXCQ9NY87 97 aa15.02■□□□□ -0
CNEP1R1-202ENST00000427478 PRSS2P07478 247 aa15.01□□□□□ -0.01
CNEP1R1-202ENST00000427478 ZNF625Q96I27 306 aaPredicted RBP15.01□□□□□ -0.01
CNEP1R1-202ENST00000427478 MIAQ16674 131 aa15.01□□□□□ -0.01
CNEP1R1-202ENST00000427478 ANK2Q01484 3957 aa15□□□□□ -0.01
CNEP1R1-202ENST00000427478 IGHV3OR16-9A0A0B4J2B5 98 aa15□□□□□ -0.01
CNEP1R1-202ENST00000427478 NPC2P61916 151 aa15□□□□□ -0.01
CNEP1R1-202ENST00000427478 TIMM17BO60830 172 aa14.99□□□□□ -0.01
CNEP1R1-202ENST00000427478 TSPAN13O95857 204 aa14.99□□□□□ -0.01
CNEP1R1-202ENST00000427478 Q8N3U1 123 aa14.99□□□□□ -0.01
CNEP1R1-202ENST00000427478 PRB2P02812 416 aaPredicted RBP14.98□□□□□ -0.01
CNEP1R1-202ENST00000427478 DAND5Q8N907 189 aa14.98□□□□□ -0.01
CNEP1R1-202ENST00000427478 C11orf68Q9H3H3 251 aaKnown RBP14.98□□□□□ -0.01
CNEP1R1-202ENST00000427478 EIF4EBP3O60516 100 aaPredicted RBP14.98□□□□□ -0.01
CNEP1R1-202ENST00000427478 C5orf38Q86SI9 138 aa14.98□□□□□ -0.01
CNEP1R1-202ENST00000427478 XCL1P47992 114 aa14.97□□□□□ -0.01
CNEP1R1-202ENST00000427478 SS18Q15532 418 aa14.97□□□□□ -0.01
CNEP1R1-202ENST00000427478 Q6ZTC4 211 aa14.97□□□□□ -0.01
CNEP1R1-202ENST00000427478 SH2D6Q7Z4S9 175 aa14.97□□□□□ -0.01
CNEP1R1-202ENST00000427478 TOMM7Q9P0U1 55 aa14.97□□□□□ -0.01
CNEP1R1-202ENST00000427478 DNAH3Q8TD57 4116 aa14.97□□□□□ -0.01
CNEP1R1-202ENST00000427478 COL6A5A8TX70 2615 aa14.96□□□□□ -0.01
CNEP1R1-202ENST00000427478 CIRBPQ14011 172 aaKnown RBP14.96□□□□□ -0.01
CNEP1R1-202ENST00000427478 COX7B2Q8TF08 81 aa14.96□□□□□ -0.01
CNEP1R1-202ENST00000427478 A0A087WZ39 114 aa14.96□□□□□ -0.01
CNEP1R1-202ENST00000427478 A0A0J9YWU9 116 aa14.96□□□□□ -0.01
CNEP1R1-202ENST00000427478 SFTA2Q6UW10 78 aa14.96□□□□□ -0.01
CNEP1R1-202ENST00000427478 LINC00269Q8N2A0 174 aa14.96□□□□□ -0.01
CNEP1R1-202ENST00000427478 PRO1854Q9UHT4 67 aa14.96□□□□□ -0.01
CNEP1R1-202ENST00000427478 A0A0U1RRA0 63 aa14.95□□□□□ -0.02
CNEP1R1-202ENST00000427478 LELP1Q5T871 98 aa14.95□□□□□ -0.02
CNEP1R1-202ENST00000427478 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.95□□□□□ -0.02
CNEP1R1-202ENST00000427478 ANGP03950 147 aaKnown RBP14.95□□□□□ -0.02
CNEP1R1-202ENST00000427478 MEIG1Q5JSS6 88 aa14.95□□□□□ -0.02
CNEP1R1-202ENST00000427478 A0A0B4J2C4 111 aa14.94□□□□□ -0.02
CNEP1R1-202ENST00000427478 HERV-K104P63124 156 aa14.93□□□□□ -0.02
CNEP1R1-202ENST00000427478 LOC107984156A0A0G2JMH3 177 aa14.91□□□□□ -0.02
CNEP1R1-202ENST00000427478 REG3AQ06141 175 aa14.91□□□□□ -0.02
CNEP1R1-202ENST00000427478 ARL17AQ8IVW1 177 aa14.91□□□□□ -0.02
CNEP1R1-202ENST00000427478 IFITM1P13164 125 aa14.9□□□□□ -0.02
CNEP1R1-202ENST00000427478 NANOS2P60321 138 aaKnown RBP14.9□□□□□ -0.02
CNEP1R1-202ENST00000427478 KPRPQ5T749 579 aaPredicted RBP14.9□□□□□ -0.02
CNEP1R1-202ENST00000427478 LYPD5Q6UWN5 251 aa14.9□□□□□ -0.02
CNEP1R1-202ENST00000427478 H7C2G1 150 aa14.89□□□□□ -0.03
CNEP1R1-202ENST00000427478 IGHV3-33P01772 117 aa14.89□□□□□ -0.03
CNEP1R1-202ENST00000427478 IGLV10-54A0A075B6I4 117 aa14.89□□□□□ -0.03
CNEP1R1-202ENST00000427478 LINC00308Q8TCZ7 52 aa14.89□□□□□ -0.03
CNEP1R1-202ENST00000427478 H3BMG7 143 aa14.88□□□□□ -0.03
CNEP1R1-202ENST00000427478 H3BNG1 76 aa14.88□□□□□ -0.03
CNEP1R1-202ENST00000427478 C11orf45Q8TAV5 145 aa14.88□□□□□ -0.03
CNEP1R1-202ENST00000427478 K7EIL1 84 aa14.87□□□□□ -0.03
CNEP1R1-202ENST00000427478 ERG28Q9UKR5 140 aa14.87□□□□□ -0.03
CNEP1R1-202ENST00000427478 CHCHD10Q8WYQ3 142 aaPredicted RBP14.87□□□□□ -0.03
CNEP1R1-202ENST00000427478 TENM3Q9P273 2699 aa14.86□□□□□ -0.03
CNEP1R1-202ENST00000427478 Q1RN00 199 aa14.85□□□□□ -0.03
CNEP1R1-202ENST00000427478 CD164L2Q6UWJ8 174 aa14.85□□□□□ -0.03
CNEP1R1-202ENST00000427478 SOSTDC1Q6X4U4 206 aa14.85□□□□□ -0.03
CNEP1R1-202ENST00000427478 DEFB121Q5J5C9 76 aa14.84□□□□□ -0.03
CNEP1R1-202ENST00000427478 MRAPQ8TCY5 172 aa14.84□□□□□ -0.03
CNEP1R1-202ENST00000427478 SPATA25Q9BR10 227 aa14.84□□□□□ -0.03
CNEP1R1-202ENST00000427478 DEFB131BA0A096LNP1 70 aa14.84□□□□□ -0.03
CNEP1R1-202ENST00000427478 LYRM7Q5U5X0 104 aa14.84□□□□□ -0.03
CNEP1R1-202ENST00000427478 PSMB2P49721 201 aa14.83□□□□□ -0.04
CNEP1R1-202ENST00000427478 KLK12Q9UKR0 248 aa14.83□□□□□ -0.04
CNEP1R1-202ENST00000427478 NOTCH1P46531 2555 aa14.83□□□□□ -0.04
CNEP1R1-202ENST00000427478 COX7A2LO14548 114 aa14.82□□□□□ -0.04
CNEP1R1-202ENST00000427478 C6orf226Q5I0X4 101 aa14.82□□□□□ -0.04
CNEP1R1-202ENST00000427478 MDFIQ99750 246 aa14.82□□□□□ -0.04
CNEP1R1-202ENST00000427478 LINC01561Q8N1V8 128 aa14.81□□□□□ -0.04
CNEP1R1-202ENST00000427478 COPS9Q8WXC6 57 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms