RNA–Protein interactions for RNA: ENST00000427461.1

LSG1-202, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-202ENST00000427461 TEX261Q6UWH6 196 aa5.03□□□□□ -1.6
LSG1-202ENST00000427461 NKX6-2Q9C056 277 aaPredicted RBP5.03□□□□□ -1.6
LSG1-202ENST00000427461 MPC2O95563 127 aa5.02□□□□□ -1.61
LSG1-202ENST00000427461 TRGC1P0CF51 173 aa5.02□□□□□ -1.61
LSG1-202ENST00000427461 PMCHP20382 165 aa5.02□□□□□ -1.61
LSG1-202ENST00000427461 SPAG11AQ6PDA7 123 aa5.02□□□□□ -1.61
LSG1-202ENST00000427461 MRPL52Q86TS9 123 aaKnown RBP5.02□□□□□ -1.61
LSG1-202ENST00000427461 BAGE2Q86Y30 109 aa5.02□□□□□ -1.61
LSG1-202ENST00000427461 KRTAP13-1Q8IUC0 172 aa5.02□□□□□ -1.61
LSG1-202ENST00000427461 LINC00469Q8N7U9 141 aa5.02□□□□□ -1.61
LSG1-202ENST00000427461 DAND5Q8N907 189 aa5.02□□□□□ -1.61
LSG1-202ENST00000427461 MRAP2Q96G30 205 aa5.02□□□□□ -1.61
LSG1-202ENST00000427461 TMEM242Q9NWH2 141 aa5.02□□□□□ -1.61
LSG1-202ENST00000427461 LINC00862A6NCI5 91 aa5.01□□□□□ -1.61
LSG1-202ENST00000427461 RPL37AP8A6NKH3 93 aa5.01□□□□□ -1.61
LSG1-202ENST00000427461 NDUFC2-KCTD14E9PQ53 114 aa5.01□□□□□ -1.61
LSG1-202ENST00000427461 F8WDY8 70 aa5.01□□□□□ -1.61
LSG1-202ENST00000427461 I3L3M4 83 aa5.01□□□□□ -1.61
LSG1-202ENST00000427461 MBP02144 154 aa5.01□□□□□ -1.61
LSG1-202ENST00000427461 CST9LP1Q5W188 147 aa5.01□□□□□ -1.61
LSG1-202ENST00000427461 TMUB2Q71RG4 321 aa5.01□□□□□ -1.61
LSG1-202ENST00000427461 STOML3Q8TAV4 291 aa5.01□□□□□ -1.61
LSG1-202ENST00000427461 PSMG3Q9BT73 122 aaPredicted RBP5.01□□□□□ -1.61
LSG1-202ENST00000427461 RNASE7Q9H1E1 156 aaKnown RBP5.01□□□□□ -1.61
LSG1-202ENST00000427461 FXYD6-FXYD2A0A087WZ82 144 aa5□□□□□ -1.61
LSG1-202ENST00000427461 LBHQ53QV2 105 aaPredicted RBP5□□□□□ -1.61
LSG1-202ENST00000427461 CLLU1Q5K131 121 aa5□□□□□ -1.61
LSG1-202ENST00000427461 LYZL1Q6UWQ5 148 aa5□□□□□ -1.61
LSG1-202ENST00000427461 C2orf82Q6UX34 121 aa5□□□□□ -1.61
LSG1-202ENST00000427461 TNFSF18Q9UNG2 199 aa5□□□□□ -1.61
LSG1-202ENST00000427461 CTXND1A0A1B0GTU2 59 aa4.99□□□□□ -1.61
LSG1-202ENST00000427461 ARPC5O15511 151 aa4.99□□□□□ -1.61
LSG1-202ENST00000427461 TNFRSF6BO95407 300 aa4.99□□□□□ -1.61
LSG1-202ENST00000427461 UBE2AP49459 152 aa4.99□□□□□ -1.61
LSG1-202ENST00000427461 FOXA3P55318 350 aaPredicted RBP4.99□□□□□ -1.61
LSG1-202ENST00000427461 SERF2P84101 59 aa4.99□□□□□ -1.61
LSG1-202ENST00000427461 KRTAP6-3Q3LI67 103 aa4.99□□□□□ -1.61
LSG1-202ENST00000427461 COX6B2Q6YFQ2 88 aa4.99□□□□□ -1.61
LSG1-202ENST00000427461 MRPL55Q7Z7F7 128 aaKnown RBP4.99□□□□□ -1.61
LSG1-202ENST00000427461 KCNRGQ8N5I3 272 aa4.99□□□□□ -1.61
LSG1-202ENST00000427461 XAGE1AQ9HD64 81 aa4.99□□□□□ -1.61
LSG1-202ENST00000427461 CYTL1Q9NRR1 136 aa4.99□□□□□ -1.61
LSG1-202ENST00000427461 RAB14P61106 215 aa4.98□□□□□ -1.61
LSG1-202ENST00000427461 ZNF345Q14585 488 aa4.98□□□□□ -1.61
LSG1-202ENST00000427461 KIAA0087Q14695 138 aa4.98□□□□□ -1.61
LSG1-202ENST00000427461 Q6ZUT4 128 aa4.98□□□□□ -1.61
LSG1-202ENST00000427461 SLC51BQ86UW2 128 aa4.98□□□□□ -1.61
LSG1-202ENST00000427461 PACRGQ96M98 296 aaPredicted RBP4.98□□□□□ -1.61
LSG1-202ENST00000427461 IGHV3OR16-9A0A0B4J2B5 98 aa4.97□□□□□ -1.61
LSG1-202ENST00000427461 C7orf77A4D0Y5 90 aa4.97□□□□□ -1.61
LSG1-202ENST00000427461 TWIST1Q15672 202 aa4.97□□□□□ -1.61
LSG1-202ENST00000427461 LINC00167Q96N53 147 aa4.97□□□□□ -1.61
LSG1-202ENST00000427461 KIR2DL4Q99706 377 aa4.97□□□□□ -1.61
LSG1-202ENST00000427461 KRTAP9-8Q9BYQ0 159 aa4.97□□□□□ -1.61
LSG1-202ENST00000427461 MED9Q9NWA0 146 aa4.97□□□□□ -1.61
LSG1-202ENST00000427461 TRBV30A0A0K0K1B3 111 aa4.96□□□□□ -1.62
LSG1-202ENST00000427461 GAGE10A6NGK3 116 aa4.96□□□□□ -1.62
LSG1-202ENST00000427461 F2Z2F3 143 aa4.96□□□□□ -1.62
LSG1-202ENST00000427461 PAGE4O60829 102 aa4.96□□□□□ -1.62
LSG1-202ENST00000427461 PET100P0DJ07 73 aa4.96□□□□□ -1.62
LSG1-202ENST00000427461 FHITP49789 147 aa4.96□□□□□ -1.62
LSG1-202ENST00000427461 PRLHP81277 87 aa4.96□□□□□ -1.62
LSG1-202ENST00000427461 TCEAL7Q9BRU2 100 aa4.96□□□□□ -1.62
LSG1-202ENST00000427461 NEBP20929 6669 aa4.95□□□□□ -1.62
LSG1-202ENST00000427461 KANTRA0A1W2PQU2 76 aa4.95□□□□□ -1.62
LSG1-202ENST00000427461 MAP1LC3B2A6NCE7 125 aa4.95□□□□□ -1.62
LSG1-202ENST00000427461 ZNF727A8MUV8 499 aa4.95□□□□□ -1.62
LSG1-202ENST00000427461 S100A9P06702 114 aaKnown RBP4.95□□□□□ -1.62
LSG1-202ENST00000427461 CFC1P0CG37 223 aa4.95□□□□□ -1.62
LSG1-202ENST00000427461 RPS20P60866 119 aaKnown RBP4.95□□□□□ -1.62
LSG1-202ENST00000427461 COMMD7Q86VX2 200 aa4.95□□□□□ -1.62
LSG1-202ENST00000427461 Q8NBF4 154 aa4.95□□□□□ -1.62
LSG1-202ENST00000427461 KRTAP3-1Q9BYR8 98 aa4.95□□□□□ -1.62
LSG1-202ENST00000427461 MAP1LC3BQ9GZQ8 125 aa4.95□□□□□ -1.62
LSG1-202ENST00000427461 TP73-AS1Q9UF72 201 aa4.95□□□□□ -1.62
LSG1-202ENST00000427461 TRBV6-5A0A0K0K1A5 114 aa4.94□□□□□ -1.62
LSG1-202ENST00000427461 ALKAL2Q6UX46 152 aa4.94□□□□□ -1.62
LSG1-202ENST00000427461 CSDC2Q9Y534 153 aaKnown RBP4.94□□□□□ -1.62
LSG1-202ENST00000427461 TRIAP1O43715 76 aa4.93□□□□□ -1.62
LSG1-202ENST00000427461 IFNA1P01562 189 aa4.93□□□□□ -1.62
LSG1-202ENST00000427461 POLR2KP53803 58 aaKnown RBP4.93□□□□□ -1.62
LSG1-202ENST00000427461 PNRC1Q12796 327 aaPredicted RBP4.93□□□□□ -1.62
LSG1-202ENST00000427461 PLEKHB2Q96CS7 222 aa4.93□□□□□ -1.62
LSG1-202ENST00000427461 ST20Q9HBF5 79 aa4.93□□□□□ -1.62
LSG1-202ENST00000427461 NDUFA12Q9UI09 145 aa4.93□□□□□ -1.62
LSG1-202ENST00000427461 RPL32P62910 135 aaKnown RBP4.92□□□□□ -1.62
LSG1-202ENST00000427461 Q8N377 158 aa4.92□□□□□ -1.62
LSG1-202ENST00000427461 FAM104AQ969W3 186 aa4.92□□□□□ -1.62
LSG1-202ENST00000427461 SPINK1P00995 79 aa4.91□□□□□ -1.62
LSG1-202ENST00000427461 RPL35P42766 123 aaKnown RBP4.91□□□□□ -1.62
LSG1-202ENST00000427461 KRTAP20-1Q3LI63 56 aa4.91□□□□□ -1.62
LSG1-202ENST00000427461 RPL7L1Q6DKI1 246 aaKnown RBP4.91□□□□□ -1.62
LSG1-202ENST00000427461 CNFNQ9BYD5 112 aa4.91□□□□□ -1.62
LSG1-202ENST00000427461 KRTAP4-8Q9BYQ9 185 aa4.91□□□□□ -1.62
LSG1-202ENST00000427461 TRBV27A0A0K0K1C4 114 aa4.9□□□□□ -1.63
LSG1-202ENST00000427461 A0A1B0GV50 99 aa4.9□□□□□ -1.63
LSG1-202ENST00000427461 XKRY2A2RUG3 117 aa4.9□□□□□ -1.63
LSG1-202ENST00000427461 SCO1O75880 301 aa4.9□□□□□ -1.63
LSG1-202ENST00000427461 FAM19A1Q7Z5A9 133 aa4.9□□□□□ -1.63
LSG1-202ENST00000427461 IGKV2-28A0A075B6P5 120 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms