RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 NANOS2P60321 138 aaKnown RBP9.92□□□□□ -0.82
CDK3-201ENST00000425876 DEFB131BA0A096LNP1 70 aa9.92□□□□□ -0.82
CDK3-201ENST00000425876 A0A1B0GV90 55 aa9.92□□□□□ -0.82
CDK3-201ENST00000425876 A6NDN8 102 aa9.92□□□□□ -0.82
CDK3-201ENST00000425876 LYPD5Q6UWN5 251 aa9.92□□□□□ -0.82
CDK3-201ENST00000425876 CEND1Q8N111 149 aa9.92□□□□□ -0.82
CDK3-201ENST00000425876 MRAPQ8TCY5 172 aa9.92□□□□□ -0.82
CDK3-201ENST00000425876 PRKDCP78527 4128 aaKnown RBP9.91□□□□□ -0.82
CDK3-201ENST00000425876 LINC00959A0A1B0GUT2 108 aa9.91□□□□□ -0.82
CDK3-201ENST00000425876 ZFAND6Q6FIF0 208 aa9.91□□□□□ -0.82
CDK3-201ENST00000425876 HIST1H4GQ99525 98 aa9.91□□□□□ -0.82
CDK3-201ENST00000425876 SPANXB1Q9NS25 103 aaPredicted RBP9.91□□□□□ -0.82
CDK3-201ENST00000425876 SMIM1B2RUZ4 78 aa9.9□□□□□ -0.82
CDK3-201ENST00000425876 GCSHP23434 173 aa9.9□□□□□ -0.82
CDK3-201ENST00000425876 NDUFA12Q9UI09 145 aa9.9□□□□□ -0.82
CDK3-201ENST00000425876 IGHV3OR16-9A0A0B4J2B5 98 aa9.89□□□□□ -0.83
CDK3-201ENST00000425876 HUWE1Q7Z6Z7 4374 aaKnown RBP9.89□□□□□ -0.83
CDK3-201ENST00000425876 TRAV10A0A0B4J240 114 aa9.88□□□□□ -0.83
CDK3-201ENST00000425876 FXYD2P54710 66 aa9.88□□□□□ -0.83
CDK3-201ENST00000425876 SS18Q15532 418 aa9.88□□□□□ -0.83
CDK3-201ENST00000425876 C10orf126Q8N4M7 172 aa9.88□□□□□ -0.83
CDK3-201ENST00000425876 IGKV3OR2-268A0A0C4DH90 116 aa9.88□□□□□ -0.83
CDK3-201ENST00000425876 A0A087WZ39 114 aa9.87□□□□□ -0.83
CDK3-201ENST00000425876 A0A0J9YXY3 114 aa9.87□□□□□ -0.83
CDK3-201ENST00000425876 TAX1BP3O14907 124 aa9.87□□□□□ -0.83
CDK3-201ENST00000425876 NDUFA1O15239 70 aa9.87□□□□□ -0.83
CDK3-201ENST00000425876 SRSF9Q13242 221 aaKnown RBP eCLIP9.87□□□□□ -0.83
CDK3-201ENST00000425876 LINC01561Q8N1V8 128 aa9.87□□□□□ -0.83
CDK3-201ENST00000425876 B9D2Q9BPU9 175 aa9.87□□□□□ -0.83
CDK3-201ENST00000425876 TMEM238C9JI98 176 aa9.86□□□□□ -0.83
CDK3-201ENST00000425876 ANGP03950 147 aaKnown RBP9.86□□□□□ -0.83
CDK3-201ENST00000425876 PTTG1IPP53801 180 aa9.86□□□□□ -0.83
CDK3-201ENST00000425876 LINC00269Q8N2A0 174 aa9.86□□□□□ -0.83
CDK3-201ENST00000425876 C15orf53Q8NAA6 179 aa9.85□□□□□ -0.83
CDK3-201ENST00000425876 COX11Q9Y6N1 276 aa9.85□□□□□ -0.83
CDK3-201ENST00000425876 TMEM238LA0A1B0GVL6 79 aa9.84□□□□□ -0.83
CDK3-201ENST00000425876 A6NJY4 79 aa9.84□□□□□ -0.83
CDK3-201ENST00000425876 TIMM17BO60830 172 aa9.84□□□□□ -0.83
CDK3-201ENST00000425876 REG3AQ06141 175 aa9.84□□□□□ -0.83
CDK3-201ENST00000425876 PRR34Q9NV39 138 aa9.84□□□□□ -0.83
CDK3-201ENST00000425876 IGHV3-30P01768 117 aa9.84□□□□□ -0.83
CDK3-201ENST00000425876 SMIM13P0DJ93 91 aa9.84□□□□□ -0.83
CDK3-201ENST00000425876 IGHV3-30-5P0DP03 117 aa9.84□□□□□ -0.83
CDK3-201ENST00000425876 Q6ZVH6 145 aa9.84□□□□□ -0.83
CDK3-201ENST00000425876 A0A1B0GWB2 263 aa9.83□□□□□ -0.84
CDK3-201ENST00000425876 K7EP13 123 aa9.83□□□□□ -0.84
CDK3-201ENST00000425876 ESRGQ1W209 222 aa9.83□□□□□ -0.84
CDK3-201ENST00000425876 CD164L2Q6UWJ8 174 aa9.83□□□□□ -0.84
CDK3-201ENST00000425876 Q8N3U1 123 aa9.83□□□□□ -0.84
CDK3-201ENST00000425876 ZNF625Q96I27 306 aaPredicted RBP9.83□□□□□ -0.84
CDK3-201ENST00000425876 LITAFQ99732 161 aa9.83□□□□□ -0.84
CDK3-201ENST00000425876 TGP01266 2768 aa9.83□□□□□ -0.84
CDK3-201ENST00000425876 XCL1P47992 114 aa9.82□□□□□ -0.84
CDK3-201ENST00000425876 HERV-K104P63124 156 aa9.82□□□□□ -0.84
CDK3-201ENST00000425876 SPANXDQ9BXN6 97 aa9.82□□□□□ -0.84
CDK3-201ENST00000425876 Q9H8V8 135 aa9.82□□□□□ -0.84
CDK3-201ENST00000425876 SPANXCQ9NY87 97 aa9.82□□□□□ -0.84
CDK3-201ENST00000425876 DNAH9Q9NYC9 4486 aa9.81□□□□□ -0.84
CDK3-201ENST00000425876 CLPSL2Q6UWE3 100 aa9.81□□□□□ -0.84
CDK3-201ENST00000425876 C5orf38Q86SI9 138 aa9.81□□□□□ -0.84
CDK3-201ENST00000425876 COX7B2Q8TF08 81 aa9.81□□□□□ -0.84
CDK3-201ENST00000425876 CHCHD10Q8WYQ3 142 aaPredicted RBP9.81□□□□□ -0.84
CDK3-201ENST00000425876 NHP2Q9NX24 153 aaKnown RBP9.81□□□□□ -0.84
CDK3-201ENST00000425876 SFTA2Q6UW10 78 aa9.8□□□□□ -0.84
CDK3-201ENST00000425876 C9orf118A6NHY6 69 aa9.8□□□□□ -0.84
CDK3-201ENST00000425876 CIRBPQ14011 172 aaKnown RBP9.8□□□□□ -0.84
CDK3-201ENST00000425876 WFDC10BQ8IUB3 73 aa9.8□□□□□ -0.84
CDK3-201ENST00000425876 KLK12Q9UKR0 248 aa9.8□□□□□ -0.84
CDK3-201ENST00000425876 TRAV8-4A0A0B4J246 113 aa9.79□□□□□ -0.84
CDK3-201ENST00000425876 COX7A2LO14548 114 aa9.79□□□□□ -0.84
CDK3-201ENST00000425876 NHLRC4P0CG21 123 aaPredicted RBP9.79□□□□□ -0.84
CDK3-201ENST00000425876 MIAQ16674 131 aa9.79□□□□□ -0.84
CDK3-201ENST00000425876 IFITM1P13164 125 aa9.78□□□□□ -0.84
CDK3-201ENST00000425876 RPL24P83731 157 aaKnown RBP9.78□□□□□ -0.84
CDK3-201ENST00000425876 LINC01556Q5JQF7 62 aa9.78□□□□□ -0.84
CDK3-201ENST00000425876 ENHOQ6UWT2 76 aa9.78□□□□□ -0.84
CDK3-201ENST00000425876 ADAMTSL4-AS1Q5T5F5 129 aa9.77□□□□□ -0.85
CDK3-201ENST00000425876 MUSTN1Q8IVN3 82 aa9.77□□□□□ -0.85
CDK3-201ENST00000425876 Q8IZM0 81 aa9.77□□□□□ -0.85
CDK3-201ENST00000425876 IGHV3-33P01772 117 aa9.76□□□□□ -0.85
CDK3-201ENST00000425876 CRPP02741 224 aa9.76□□□□□ -0.85
CDK3-201ENST00000425876 FOXI1Q12951 378 aa9.76□□□□□ -0.85
CDK3-201ENST00000425876 TOMM7Q9P0U1 55 aa9.76□□□□□ -0.85
CDK3-201ENST00000425876 IGLV10-54A0A075B6I4 117 aa9.75□□□□□ -0.85
CDK3-201ENST00000425876 K7ERJ3 54 aa9.75□□□□□ -0.85
CDK3-201ENST00000425876 RAB37Q96AX2 223 aa9.75□□□□□ -0.85
CDK3-201ENST00000425876 PPDPFQ9H3Y8 114 aa9.75□□□□□ -0.85
CDK3-201ENST00000425876 STAB2Q8WWQ8 2551 aa9.75□□□□□ -0.85
CDK3-201ENST00000425876 PRSS2P07478 247 aa9.75□□□□□ -0.85
CDK3-201ENST00000425876 DNAH10OSP0CZ25 163 aa9.75□□□□□ -0.85
CDK3-201ENST00000425876 COPS9Q8WXC6 57 aa9.75□□□□□ -0.85
CDK3-201ENST00000425876 COL7A1Q02388 2944 aa9.74□□□□□ -0.85
CDK3-201ENST00000425876 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.74□□□□□ -0.85
CDK3-201ENST00000425876 A4D1N5 150 aa9.74□□□□□ -0.85
CDK3-201ENST00000425876 C6orf226Q5I0X4 101 aa9.74□□□□□ -0.85
CDK3-201ENST00000425876 UBE2WQ96B02 151 aa9.74□□□□□ -0.85
CDK3-201ENST00000425876 GAGE12HA6NDE8 117 aa9.73□□□□□ -0.85
CDK3-201ENST00000425876 IGLL5B9A064 214 aa9.73□□□□□ -0.85
CDK3-201ENST00000425876 H3BUT2 72 aa9.73□□□□□ -0.85
CDK3-201ENST00000425876 CFC1BP0CG36 223 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms