RNA–Protein interactions for RNA: ENST00000425516.1

CHCHD3P1-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3 pseudogene 1, humanhuman

BASIC

Gene CHCHD3P1, Length 676 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3P1-201ENST00000425516 CHCHD1Q96BP2 118 aaKnown RBP4.68□□□□□ -1.66
CHCHD3P1-201ENST00000425516 HIST1H2BNQ99877 126 aa4.68□□□□□ -1.66
CHCHD3P1-201ENST00000425516 HIST1H2BMQ99879 126 aa4.68□□□□□ -1.66
CHCHD3P1-201ENST00000425516 IGKV2D-24A0A075B6R9 120 aa4.67□□□□□ -1.66
CHCHD3P1-201ENST00000425516 LINC01549A6NIU2 74 aa4.67□□□□□ -1.66
CHCHD3P1-201ENST00000425516 CRPP02741 224 aa4.67□□□□□ -1.66
CHCHD3P1-201ENST00000425516 RNASE13Q5GAN3 156 aaKnown RBP4.67□□□□□ -1.66
CHCHD3P1-201ENST00000425516 LINC00173Q6ZV60 143 aa4.67□□□□□ -1.66
CHCHD3P1-201ENST00000425516 ERASQ7Z444 233 aa4.67□□□□□ -1.66
CHCHD3P1-201ENST00000425516 AMELXQ99217 191 aa4.67□□□□□ -1.66
CHCHD3P1-201ENST00000425516 TIMM17AQ99595 171 aa4.67□□□□□ -1.66
CHCHD3P1-201ENST00000425516 TM2D2Q9BX73 214 aa4.67□□□□□ -1.66
CHCHD3P1-201ENST00000425516 COX11Q9Y6N1 276 aa4.67□□□□□ -1.66
CHCHD3P1-201ENST00000425516 IGLV10-54A0A075B6I4 117 aa4.66□□□□□ -1.66
CHCHD3P1-201ENST00000425516 A0A1B0GVY2 172 aa4.66□□□□□ -1.66
CHCHD3P1-201ENST00000425516 PRSS29PA6NIE9 313 aa4.66□□□□□ -1.66
CHCHD3P1-201ENST00000425516 CCL25O15444 150 aa4.66□□□□□ -1.66
CHCHD3P1-201ENST00000425516 SERF1AO75920 110 aa4.66□□□□□ -1.66
CHCHD3P1-201ENST00000425516 WFDC2Q14508 124 aa4.66□□□□□ -1.66
CHCHD3P1-201ENST00000425516 PMCHL1Q16048 86 aa4.66□□□□□ -1.66
CHCHD3P1-201ENST00000425516 ZC2HC1BQ5TFG8 222 aa4.66□□□□□ -1.66
CHCHD3P1-201ENST00000425516 BAGE3Q86Y29 109 aa4.66□□□□□ -1.66
CHCHD3P1-201ENST00000425516 RMI2Q96E14 147 aa4.66□□□□□ -1.66
CHCHD3P1-201ENST00000425516 TMEM141Q96I45 108 aa4.66□□□□□ -1.66
CHCHD3P1-201ENST00000425516 SCGB3A1Q96QR1 104 aa4.66□□□□□ -1.66
CHCHD3P1-201ENST00000425516 C1orf43Q9BWL3 253 aa4.66□□□□□ -1.66
CHCHD3P1-201ENST00000425516 A0A087WTM6 91 aa4.65□□□□□ -1.67
CHCHD3P1-201ENST00000425516 IGKV3OR2-268A0A0C4DH90 116 aa4.65□□□□□ -1.67
CHCHD3P1-201ENST00000425516 HBDP02042 147 aa4.65□□□□□ -1.67
CHCHD3P1-201ENST00000425516 COA6Q5JTJ3 125 aaKnown RBP4.65□□□□□ -1.67
CHCHD3P1-201ENST00000425516 FAM19A3Q7Z5A8 133 aa4.65□□□□□ -1.67
CHCHD3P1-201ENST00000425516 FAM19A2Q8N3H0 131 aa4.65□□□□□ -1.67
CHCHD3P1-201ENST00000425516 CHCHD10Q8WYQ3 142 aaPredicted RBP4.65□□□□□ -1.67
CHCHD3P1-201ENST00000425516 TRAV13-1A0A0B4J241 112 aa4.64□□□□□ -1.67
CHCHD3P1-201ENST00000425516 GAGE12HA6NDE8 117 aa4.64□□□□□ -1.67
CHCHD3P1-201ENST00000425516 C1orf196B1AJZ1 125 aa4.64□□□□□ -1.67
CHCHD3P1-201ENST00000425516 PSCAO43653 123 aa4.64□□□□□ -1.67
CHCHD3P1-201ENST00000425516 UBE2D1P51668 147 aa4.64□□□□□ -1.67
CHCHD3P1-201ENST00000425516 FOXI1Q12951 378 aa4.64□□□□□ -1.67
CHCHD3P1-201ENST00000425516 SS18Q15532 418 aa4.64□□□□□ -1.67
CHCHD3P1-201ENST00000425516 CD164L2Q6UWJ8 174 aa4.64□□□□□ -1.67
CHCHD3P1-201ENST00000425516 TEX43Q6ZNM6 134 aa4.64□□□□□ -1.67
CHCHD3P1-201ENST00000425516 BAALCQ8WXS3 180 aa4.64□□□□□ -1.67
CHCHD3P1-201ENST00000425516 VCX2Q9H322 139 aa4.64□□□□□ -1.67
CHCHD3P1-201ENST00000425516 IGHV3OR16-9A0A0B4J2B5 98 aa4.63□□□□□ -1.67
CHCHD3P1-201ENST00000425516 IFITM10A6NMD0 228 aa4.63□□□□□ -1.67
CHCHD3P1-201ENST00000425516 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.63□□□□□ -1.67
CHCHD3P1-201ENST00000425516 HSBP1O75506 76 aa4.63□□□□□ -1.67
CHCHD3P1-201ENST00000425516 XCL1P47992 114 aa4.63□□□□□ -1.67
CHCHD3P1-201ENST00000425516 COX6A2Q02221 97 aa4.63□□□□□ -1.67
CHCHD3P1-201ENST00000425516 PAPPA-AS1Q5QFB9 102 aa4.63□□□□□ -1.67
CHCHD3P1-201ENST00000425516 LINC00242Q5T6M2 205 aa4.63□□□□□ -1.67
CHCHD3P1-201ENST00000425516 Q6ZN92 141 aa4.63□□□□□ -1.67
CHCHD3P1-201ENST00000425516 CST9LQ9H4G1 147 aa4.63□□□□□ -1.67
CHCHD3P1-201ENST00000425516 USP17L23D6RBM5 183 aa4.62□□□□□ -1.67
CHCHD3P1-201ENST00000425516 LECT2O14960 151 aa4.62□□□□□ -1.67
CHCHD3P1-201ENST00000425516 ATP5LO75964 103 aa4.62□□□□□ -1.67
CHCHD3P1-201ENST00000425516 PMVKQ15126 192 aa4.62□□□□□ -1.67
CHCHD3P1-201ENST00000425516 Q8N814 137 aa4.62□□□□□ -1.67
CHCHD3P1-201ENST00000425516 C15orf56Q8N910 161 aa4.62□□□□□ -1.67
CHCHD3P1-201ENST00000425516 IFI27L1Q96BM0 104 aa4.62□□□□□ -1.67
CHCHD3P1-201ENST00000425516 A0A0J9YXV3 536 aa4.61□□□□□ -1.67
CHCHD3P1-201ENST00000425516 PRSS1P07477 247 aa4.61□□□□□ -1.67
CHCHD3P1-201ENST00000425516 NDUFA6P56556 154 aa4.61□□□□□ -1.67
CHCHD3P1-201ENST00000425516 NTN5Q8WTR8 489 aaPredicted RBP4.61□□□□□ -1.67
CHCHD3P1-201ENST00000425516 C2orf88Q9BSF0 95 aa4.61□□□□□ -1.67
CHCHD3P1-201ENST00000425516 PKHD1P08F94 4074 aa4.61□□□□□ -1.67
CHCHD3P1-201ENST00000425516 DNAH5Q8TE73 4624 aa4.6□□□□□ -1.67
CHCHD3P1-201ENST00000425516 IGLV4-69A0A075B6H9 119 aa4.6□□□□□ -1.67
CHCHD3P1-201ENST00000425516 IGLV5-45A0A087WSX0 123 aa4.6□□□□□ -1.67
CHCHD3P1-201ENST00000425516 A0A087WZ39 114 aa4.6□□□□□ -1.67
CHCHD3P1-201ENST00000425516 TRAV12-1A0A0B4J245 112 aa4.6□□□□□ -1.67
CHCHD3P1-201ENST00000425516 TINCRA0A1B0GVN0 87 aa4.6□□□□□ -1.67
CHCHD3P1-201ENST00000425516 LEPROTL1O95214 131 aa4.6□□□□□ -1.67
CHCHD3P1-201ENST00000425516 SPATA12Q7Z6I5 190 aa4.6□□□□□ -1.67
CHCHD3P1-201ENST00000425516 C5orf38Q86SI9 138 aa4.6□□□□□ -1.67
CHCHD3P1-201ENST00000425516 LINC01561Q8N1V8 128 aa4.6□□□□□ -1.67
CHCHD3P1-201ENST00000425516 PACRGQ96M98 296 aaPredicted RBP4.6□□□□□ -1.67
CHCHD3P1-201ENST00000425516 IGHV3-64A0A075B6Q5 118 aa4.59□□□□□ -1.67
CHCHD3P1-201ENST00000425516 GVQW2A0A096LPI5 108 aaPredicted RBP4.59□□□□□ -1.67
CHCHD3P1-201ENST00000425516 IGHV1-58A0A0C4DH39 117 aa4.59□□□□□ -1.67
CHCHD3P1-201ENST00000425516 COX7A2LO14548 114 aa4.59□□□□□ -1.67
CHCHD3P1-201ENST00000425516 IGLC3P0DOY3 106 aa4.59□□□□□ -1.67
CHCHD3P1-201ENST00000425516 FABP4P15090 132 aa4.59□□□□□ -1.67
CHCHD3P1-201ENST00000425516 FUSP35637 526 aaKnown RBP eCLIP4.59□□□□□ -1.67
CHCHD3P1-201ENST00000425516 HERVK_113P63121 156 aa4.59□□□□□ -1.67
CHCHD3P1-201ENST00000425516 SEC11AP67812 179 aa4.59□□□□□ -1.67
CHCHD3P1-201ENST00000425516 ODF1Q14990 250 aa4.59□□□□□ -1.67
CHCHD3P1-201ENST00000425516 C14orf177Q52M58 125 aa4.59□□□□□ -1.67
CHCHD3P1-201ENST00000425516 CFAP161Q6P656 301 aa4.59□□□□□ -1.67
CHCHD3P1-201ENST00000425516 CDKN2A-AS1Q9UH64 79 aa4.59□□□□□ -1.67
CHCHD3P1-201ENST00000425516 HSPB8Q9UJY1 196 aa4.59□□□□□ -1.67
CHCHD3P1-201ENST00000425516 DYNC1H1Q14204 4646 aaKnown RBP4.58□□□□□ -1.68
CHCHD3P1-201ENST00000425516 CNBPP62633 177 aaKnown RBP4.58□□□□□ -1.68
CHCHD3P1-201ENST00000425516 KIAA0087Q14695 138 aa4.58□□□□□ -1.68
CHCHD3P1-201ENST00000425516 KRTAP15-1Q3LI76 137 aa4.58□□□□□ -1.68
CHCHD3P1-201ENST00000425516 HIST3H2BBQ8N257 126 aa4.58□□□□□ -1.68
CHCHD3P1-201ENST00000425516 LRP1BQ9NZR2 4599 aa4.57□□□□□ -1.68
CHCHD3P1-201ENST00000425516 DNAH8Q96JB1 4490 aa4.57□□□□□ -1.68
CHCHD3P1-201ENST00000425516 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms