RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 IGLV5-39A0A0G2JS06 123 aa18.28■□□□□ 0.52
LDB1-202ENST00000425280 SRSF9Q13242 221 aaKnown RBP eCLIP18.27■□□□□ 0.52
LDB1-202ENST00000425280 DEFB121Q5J5C9 76 aa18.27■□□□□ 0.52
LDB1-202ENST00000425280 SPANXB1Q9NS25 103 aaPredicted RBP18.27■□□□□ 0.52
LDB1-202ENST00000425280 SMIM1B2RUZ4 78 aa18.27■□□□□ 0.51
LDB1-202ENST00000425280 SPATA25Q9BR10 227 aa18.27■□□□□ 0.51
LDB1-202ENST00000425280 NDUFA12Q9UI09 145 aa18.27■□□□□ 0.51
LDB1-202ENST00000425280 TM2D3Q9BRN9 247 aa18.26■□□□□ 0.51
LDB1-202ENST00000425280 ZFAND6Q6FIF0 208 aa18.26■□□□□ 0.51
LDB1-202ENST00000425280 A0A0J9YXY3 114 aa18.25■□□□□ 0.51
LDB1-202ENST00000425280 NANOS2P60321 138 aaKnown RBP18.25■□□□□ 0.51
LDB1-202ENST00000425280 H3BNG1 76 aa18.24■□□□□ 0.51
LDB1-202ENST00000425280 LELP1Q5T871 98 aa18.24■□□□□ 0.51
LDB1-202ENST00000425280 LINC00959A0A1B0GUT2 108 aa18.24■□□□□ 0.51
LDB1-202ENST00000425280 C11orf45Q8TAV5 145 aa18.24■□□□□ 0.51
LDB1-202ENST00000425280 MRAPQ8TCY5 172 aa18.24■□□□□ 0.51
LDB1-202ENST00000425280 NHP2Q9NX24 153 aaKnown RBP18.24■□□□□ 0.51
LDB1-202ENST00000425280 SMIM13P0DJ93 91 aa18.22■□□□□ 0.51
LDB1-202ENST00000425280 Q8N3U1 123 aa18.22■□□□□ 0.51
LDB1-202ENST00000425280 MGAM2Q2M2H8 2515 aa18.21■□□□□ 0.51
LDB1-202ENST00000425280 K7ERJ3 54 aa18.21■□□□□ 0.51
LDB1-202ENST00000425280 RAB37Q96AX2 223 aa18.21■□□□□ 0.51
LDB1-202ENST00000425280 IGHV3-30P01768 117 aa18.2■□□□□ 0.5
LDB1-202ENST00000425280 IGHV3-30-5P0DP03 117 aa18.2■□□□□ 0.5
LDB1-202ENST00000425280 LYPD5Q6UWN5 251 aa18.2■□□□□ 0.5
LDB1-202ENST00000425280 IGHV3OR16-9A0A0B4J2B5 98 aa18.19■□□□□ 0.5
LDB1-202ENST00000425280 NDUFA1O15239 70 aa18.19■□□□□ 0.5
LDB1-202ENST00000425280 CLPSL2Q6UWE3 100 aa18.19■□□□□ 0.5
LDB1-202ENST00000425280 C9orf118A6NHY6 69 aa18.18■□□□□ 0.5
LDB1-202ENST00000425280 TMEM238C9JI98 176 aa18.18■□□□□ 0.5
LDB1-202ENST00000425280 LITAFQ99732 161 aa18.18■□□□□ 0.5
LDB1-202ENST00000425280 LINC00269Q8N2A0 174 aa18.17■□□□□ 0.5
LDB1-202ENST00000425280 DEFB131BA0A096LNP1 70 aa18.16■□□□□ 0.5
LDB1-202ENST00000425280 SS18Q15532 418 aa18.16■□□□□ 0.5
LDB1-202ENST00000425280 A0A1B0GWB2 263 aa18.15■□□□□ 0.5
LDB1-202ENST00000425280 ANGP03950 147 aaKnown RBP18.15■□□□□ 0.5
LDB1-202ENST00000425280 A0A087WZ39 114 aa18.14■□□□□ 0.49
LDB1-202ENST00000425280 TMEM238LA0A1B0GVL6 79 aa18.14■□□□□ 0.49
LDB1-202ENST00000425280 A6NJY4 79 aa18.14■□□□□ 0.49
LDB1-202ENST00000425280 CCL25O15444 150 aa18.14■□□□□ 0.49
LDB1-202ENST00000425280 Q9H8V8 135 aa18.14■□□□□ 0.49
LDB1-202ENST00000425280 NAA38Q9BRA0 125 aaKnown RBP18.13■□□□□ 0.49
LDB1-202ENST00000425280 XCL1P47992 114 aa18.13■□□□□ 0.49
LDB1-202ENST00000425280 C5orf38Q86SI9 138 aa18.13■□□□□ 0.49
LDB1-202ENST00000425280 H3BUT2 72 aa18.12■□□□□ 0.49
LDB1-202ENST00000425280 VAMP3Q15836 100 aa18.12■□□□□ 0.49
LDB1-202ENST00000425280 ADAMTSL4-AS1Q5T5F5 129 aa18.12■□□□□ 0.49
LDB1-202ENST00000425280 REG3AQ06141 175 aa18.11■□□□□ 0.49
LDB1-202ENST00000425280 ZNF625Q96I27 306 aaPredicted RBP18.11■□□□□ 0.49
LDB1-202ENST00000425280 TIMM17BO60830 172 aa18.1■□□□□ 0.49
LDB1-202ENST00000425280 MUSTN1Q8IVN3 82 aa18.1■□□□□ 0.49
LDB1-202ENST00000425280 COX7B2Q8TF08 81 aa18.1■□□□□ 0.49
LDB1-202ENST00000425280 SPANXDQ9BXN6 97 aa18.09■□□□□ 0.49
LDB1-202ENST00000425280 SPANXCQ9NY87 97 aa18.09■□□□□ 0.49
LDB1-202ENST00000425280 HUWE1Q7Z6Z7 4374 aaKnown RBP18.08■□□□□ 0.49
LDB1-202ENST00000425280 MIAQ16674 131 aa18.06■□□□□ 0.48
LDB1-202ENST00000425280 CHCHD10Q8WYQ3 142 aaPredicted RBP18.06■□□□□ 0.48
LDB1-202ENST00000425280 TOMM7Q9P0U1 55 aa18.06■□□□□ 0.48
LDB1-202ENST00000425280 UBE2V1Q13404 147 aa18.05■□□□□ 0.48
LDB1-202ENST00000425280 ESRGQ1W209 222 aa18.05■□□□□ 0.48
LDB1-202ENST00000425280 TRAV10A0A0B4J240 114 aa18.05■□□□□ 0.48
LDB1-202ENST00000425280 A4D1N5 150 aa18.05■□□□□ 0.48
LDB1-202ENST00000425280 IGLL5B9A064 214 aa18.05■□□□□ 0.48
LDB1-202ENST00000425280 IGLV10-54A0A075B6I4 117 aa18.04■□□□□ 0.48
LDB1-202ENST00000425280 APOMO95445 188 aa18.04■□□□□ 0.48
LDB1-202ENST00000425280 PRSS2P07478 247 aa18.04■□□□□ 0.48
LDB1-202ENST00000425280 RPL24P83731 157 aaKnown RBP18.04■□□□□ 0.48
LDB1-202ENST00000425280 CD164L2Q6UWJ8 174 aa18.04■□□□□ 0.48
LDB1-202ENST00000425280 WFDC10BQ8IUB3 73 aa18.04■□□□□ 0.48
LDB1-202ENST00000425280 A0A1W2PPM0 123 aa18.03■□□□□ 0.48
LDB1-202ENST00000425280 CFC1BP0CG36 223 aa18.03■□□□□ 0.48
LDB1-202ENST00000425280 CFC1P0CG37 223 aa18.03■□□□□ 0.48
LDB1-202ENST00000425280 HERV-K104P63124 156 aa18.03■□□□□ 0.48
LDB1-202ENST00000425280 KLK12Q9UKR0 248 aa18.03■□□□□ 0.48
LDB1-202ENST00000425280 CIRBPQ14011 172 aaKnown RBP18.03■□□□□ 0.48
LDB1-202ENST00000425280 PRR34Q9NV39 138 aa18.03■□□□□ 0.48
LDB1-202ENST00000425280 IGHV3-33P01772 117 aa18.02■□□□□ 0.48
LDB1-202ENST00000425280 LINC01561Q8N1V8 128 aa18.02■□□□□ 0.47
LDB1-202ENST00000425280 DAND5Q8N907 189 aa18.01■□□□□ 0.47
LDB1-202ENST00000425280 NPC2P61916 151 aa17.99■□□□□ 0.47
LDB1-202ENST00000425280 ENHOQ6UWT2 76 aa17.99■□□□□ 0.47
LDB1-202ENST00000425280 EIF4EBP3O60516 100 aaPredicted RBP17.99■□□□□ 0.47
LDB1-202ENST00000425280 MEIG1Q5JSS6 88 aa17.99■□□□□ 0.47
LDB1-202ENST00000425280 COX7A2LO14548 114 aa17.98■□□□□ 0.47
LDB1-202ENST00000425280 PGPEP1Q9NXJ5 209 aa17.98■□□□□ 0.47
LDB1-202ENST00000425280 A0A0U1RRA0 63 aa17.97■□□□□ 0.47
LDB1-202ENST00000425280 FABP2P12104 132 aa17.97■□□□□ 0.47
LDB1-202ENST00000425280 IFITM1P13164 125 aa17.97■□□□□ 0.47
LDB1-202ENST00000425280 FOXI1Q12951 378 aa17.97■□□□□ 0.47
LDB1-202ENST00000425280 C15orf53Q8NAA6 179 aa17.95■□□□□ 0.46
LDB1-202ENST00000425280 TRAV16A0A0A6YYK6 109 aaPredicted RBP17.94■□□□□ 0.46
LDB1-202ENST00000425280 GAGE10A6NGK3 116 aa17.94■□□□□ 0.46
LDB1-202ENST00000425280 C6orf226Q5I0X4 101 aa17.94■□□□□ 0.46
LDB1-202ENST00000425280 Q8IZM0 81 aa17.94■□□□□ 0.46
LDB1-202ENST00000425280 A0A0B4J2C4 111 aa17.94■□□□□ 0.46
LDB1-202ENST00000425280 K7EP34 96 aa17.94■□□□□ 0.46
LDB1-202ENST00000425280 TSPAN13O95857 204 aa17.94■□□□□ 0.46
LDB1-202ENST00000425280 B9D2Q9BPU9 175 aa17.94■□□□□ 0.46
LDB1-202ENST00000425280 PRO1854Q9UHT4 67 aa17.94■□□□□ 0.46
LDB1-202ENST00000425280 GAGE12HA6NDE8 117 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 234.6 ms