RNA–Protein interactions for RNA: ENST00000423463.6

VPS13A-208, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,702 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-208ENST00000423463 RYR2Q92736 4967 aa1.63□□□□□ -2.15
VPS13A-208ENST00000423463 ALMS1Q8TCU4 4167 aa1.63□□□□□ -2.15
VPS13A-208ENST00000423463 DYNC2H1Q8NCM8 4307 aaKnown RBP1.62□□□□□ -2.15
VPS13A-208ENST00000423463 UBR4Q5T4S7 5183 aa1.62□□□□□ -2.15
VPS13A-208ENST00000423463 TRBV24-1A0A075B6N3 115 aa1.62□□□□□ -2.15
VPS13A-208ENST00000423463 TRAV9-1A0A075B6T8 112 aa1.62□□□□□ -2.15
VPS13A-208ENST00000423463 A0A087WTM6 91 aa1.62□□□□□ -2.15
VPS13A-208ENST00000423463 TRAV26-2A0A0B4J265 109 aa1.62□□□□□ -2.15
VPS13A-208ENST00000423463 TRBV27A0A0K0K1C4 114 aa1.62□□□□□ -2.15
VPS13A-208ENST00000423463 I3L3M4 83 aa1.62□□□□□ -2.15
VPS13A-208ENST00000423463 TCAPO15273 167 aa1.62□□□□□ -2.15
VPS13A-208ENST00000423463 PSCAO43653 123 aa1.62□□□□□ -2.15
VPS13A-208ENST00000423463 RBX1P62877 108 aa1.62□□□□□ -2.15
VPS13A-208ENST00000423463 RPL32P62910 135 aaKnown RBP1.62□□□□□ -2.15
VPS13A-208ENST00000423463 MRPL51Q4U2R6 128 aaKnown RBP1.62□□□□□ -2.15
VPS13A-208ENST00000423463 C10orf91Q5T1B1 145 aa1.62□□□□□ -2.15
VPS13A-208ENST00000423463 MRPL54Q6P161 138 aaKnown RBP1.62□□□□□ -2.15
VPS13A-208ENST00000423463 BTF3L4Q96K17 158 aa1.62□□□□□ -2.15
VPS13A-208ENST00000423463 C20orf78Q9BR46 151 aa1.62□□□□□ -2.15
VPS13A-208ENST00000423463 TMEM70Q9BUB7 260 aa1.62□□□□□ -2.15
VPS13A-208ENST00000423463 TMEM242Q9NWH2 141 aa1.62□□□□□ -2.15
VPS13A-208ENST00000423463 CARHSP1Q9Y2V2 147 aaKnown RBP1.62□□□□□ -2.15
VPS13A-208ENST00000423463 C7orf77A4D0Y5 90 aa1.62□□□□□ -2.15
VPS13A-208ENST00000423463 A8MU10 97 aa1.62□□□□□ -2.15
VPS13A-208ENST00000423463 UBE2L6O14933 153 aa1.62□□□□□ -2.15
VPS13A-208ENST00000423463 CRPP02741 224 aa1.62□□□□□ -2.15
VPS13A-208ENST00000423463 APCSP02743 223 aa1.62□□□□□ -2.15
VPS13A-208ENST00000423463 ANGP03950 147 aaKnown RBP1.62□□□□□ -2.15
VPS13A-208ENST00000423463 ESDP10768 282 aa1.62□□□□□ -2.15
VPS13A-208ENST00000423463 ADCYAP1P18509 176 aa1.62□□□□□ -2.15
VPS13A-208ENST00000423463 CKS2P33552 79 aa1.62□□□□□ -2.15
VPS13A-208ENST00000423463 RPS10P46783 165 aaKnown RBP1.62□□□□□ -2.15
VPS13A-208ENST00000423463 SMAGPQ0VAQ4 97 aa1.62□□□□□ -2.15
VPS13A-208ENST00000423463 MIAQ16674 131 aa1.62□□□□□ -2.15
VPS13A-208ENST00000423463 COX19Q49B96 90 aa1.62□□□□□ -2.15
VPS13A-208ENST00000423463 MPV17L2Q567V2 206 aa1.62□□□□□ -2.15
VPS13A-208ENST00000423463 ENHOQ6UWT2 76 aa1.62□□□□□ -2.15
VPS13A-208ENST00000423463 TMEM136Q6ZRR5 245 aa1.62□□□□□ -2.15
VPS13A-208ENST00000423463 KRTAP11-1Q8IUC1 163 aa1.62□□□□□ -2.15
VPS13A-208ENST00000423463 SLC7A5P1Q8MH63 180 aa1.62□□□□□ -2.15
VPS13A-208ENST00000423463 UBE2WQ96B02 151 aa1.62□□□□□ -2.15
VPS13A-208ENST00000423463 PPDPFQ9H3Y8 114 aa1.62□□□□□ -2.15
VPS13A-208ENST00000423463 KMT2CQ8NEZ4 4911 aaKnown RBP1.62□□□□□ -2.15
VPS13A-208ENST00000423463 IGKV2D-24A0A075B6R9 120 aa1.61□□□□□ -2.15
VPS13A-208ENST00000423463 TRAV8-4A0A0B4J246 113 aa1.61□□□□□ -2.15
VPS13A-208ENST00000423463 LRCOL1A6NCL2 159 aa1.61□□□□□ -2.15
VPS13A-208ENST00000423463 E9PLD3 99 aa1.61□□□□□ -2.15
VPS13A-208ENST00000423463 SMKR1H3BMG3 65 aa1.61□□□□□ -2.15
VPS13A-208ENST00000423463 ZNF25P17030 456 aaPredicted RBP1.61□□□□□ -2.15
VPS13A-208ENST00000423463 S100PP25815 95 aa1.61□□□□□ -2.15
VPS13A-208ENST00000423463 NDUFA5Q16718 116 aa1.61□□□□□ -2.15
VPS13A-208ENST00000423463 AMMECR1LQ6DCA0 310 aa1.61□□□□□ -2.15
VPS13A-208ENST00000423463 SPATA12Q7Z6I5 190 aa1.61□□□□□ -2.15
VPS13A-208ENST00000423463 ORMDL3Q8N138 153 aa1.61□□□□□ -2.15
VPS13A-208ENST00000423463 Q8N976 141 aa1.61□□□□□ -2.15
VPS13A-208ENST00000423463 C20orf203Q8NBC4 194 aa1.61□□□□□ -2.15
VPS13A-208ENST00000423463 PRELID3AQ96N28 172 aa1.61□□□□□ -2.15
VPS13A-208ENST00000423463 KIR2DL4Q99706 377 aa1.61□□□□□ -2.15
VPS13A-208ENST00000423463 LAMTOR2Q9Y2Q5 125 aa1.61□□□□□ -2.15
VPS13A-208ENST00000423463 PLECQ15149 4684 aaKnown RBP1.61□□□□□ -2.15
VPS13A-208ENST00000423463 MUC2Q02817 5179 aa1.61□□□□□ -2.15
VPS13A-208ENST00000423463 CSMD3Q7Z407 3707 aa1.61□□□□□ -2.15
VPS13A-208ENST00000423463 IGLV4-60A0A075B6I1 120 aa1.61□□□□□ -2.15
VPS13A-208ENST00000423463 C16orf90A8MZG2 172 aa1.61□□□□□ -2.15
VPS13A-208ENST00000423463 D6R8Y8 96 aa1.61□□□□□ -2.15
VPS13A-208ENST00000423463 SNAPINO95295 136 aa1.61□□□□□ -2.15
VPS13A-208ENST00000423463 FGF6P10767 208 aa1.61□□□□□ -2.15
VPS13A-208ENST00000423463 FCER1GP30273 86 aa1.61□□□□□ -2.15
VPS13A-208ENST00000423463 REG3AQ06141 175 aa1.61□□□□□ -2.15
VPS13A-208ENST00000423463 RHEBQ15382 184 aa1.61□□□□□ -2.15
VPS13A-208ENST00000423463 PRR4Q16378 134 aa1.61□□□□□ -2.15
VPS13A-208ENST00000423463 RNASEKQ6P5S7 137 aaKnown RBP1.61□□□□□ -2.15
VPS13A-208ENST00000423463 MRPL52Q86TS9 123 aaKnown RBP1.61□□□□□ -2.15
VPS13A-208ENST00000423463 LINC00269Q8N2A0 174 aa1.61□□□□□ -2.15
VPS13A-208ENST00000423463 DEFB104AQ8WTQ1 72 aa1.61□□□□□ -2.15
VPS13A-208ENST00000423463 TMEM101Q96IK0 257 aa1.61□□□□□ -2.15
VPS13A-208ENST00000423463 TIMM21Q9BVV7 248 aa1.61□□□□□ -2.15
VPS13A-208ENST00000423463 DNAH1Q9P2D7 4330 aa1.61□□□□□ -2.15
VPS13A-208ENST00000423463 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.6□□□□□ -2.15
VPS13A-208ENST00000423463 FAM168BA1KXE4 195 aa1.6□□□□□ -2.15
VPS13A-208ENST00000423463 IGKV2-29A2NJV5 120 aaPredicted RBP1.6□□□□□ -2.15
VPS13A-208ENST00000423463 CCL25O15444 150 aa1.6□□□□□ -2.15
VPS13A-208ENST00000423463 NPYP01303 97 aa1.6□□□□□ -2.15
VPS13A-208ENST00000423463 HLA-DQA1P01909 254 aa1.6□□□□□ -2.15
VPS13A-208ENST00000423463 APOC3P02656 99 aa1.6□□□□□ -2.15
VPS13A-208ENST00000423463 RAB5AP20339 215 aa1.6□□□□□ -2.15
VPS13A-208ENST00000423463 LINC01561Q8N1V8 128 aa1.6□□□□□ -2.15
VPS13A-208ENST00000423463 SVBPQ8N300 66 aa1.6□□□□□ -2.15
VPS13A-208ENST00000423463 OR5A1Q8NGJ0 315 aa1.6□□□□□ -2.15
VPS13A-208ENST00000423463 BAALCQ8WXS3 180 aa1.6□□□□□ -2.15
VPS13A-208ENST00000423463 SMIM2Q9BVW6 85 aa1.6□□□□□ -2.15
VPS13A-208ENST00000423463 GNB1LQ9BYB4 327 aa1.6□□□□□ -2.15
VPS13A-208ENST00000423463 CSDC2Q9Y534 153 aaKnown RBP1.6□□□□□ -2.15
VPS13A-208ENST00000423463 RYR3Q15413 4870 aa1.6□□□□□ -2.15
VPS13A-208ENST00000423463 K7EMI3 77 aa1.6□□□□□ -2.15
VPS13A-208ENST00000423463 MT-ND6P03923 174 aa1.6□□□□□ -2.15
VPS13A-208ENST00000423463 G0S2P27469 103 aa1.6□□□□□ -2.15
VPS13A-208ENST00000423463 KRTAP26-1Q6PEX3 210 aa1.6□□□□□ -2.15
VPS13A-208ENST00000423463 ZNF664Q8N3J9 261 aa1.6□□□□□ -2.15
VPS13A-208ENST00000423463 Q8N814 137 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms