RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 C2orf91Q6ZV80 131 aa6.16□□□□□ -1.42
UBR4-206ENST00000419533 M0R378 163 aa6.15□□□□□ -1.42
UBR4-206ENST00000419533 UBE2D3P61077 147 aa6.15□□□□□ -1.42
UBR4-206ENST00000419533 UBE2D2P62837 147 aa6.15□□□□□ -1.42
UBR4-206ENST00000419533 IGKV2D-26A0A0A0MRZ7 120 aa6.15□□□□□ -1.42
UBR4-206ENST00000419533 CHCHD7Q9BUK0 85 aa6.15□□□□□ -1.42
UBR4-206ENST00000419533 BPY2O14599 106 aa6.15□□□□□ -1.42
UBR4-206ENST00000419533 WFDC9Q8NEX5 89 aa6.15□□□□□ -1.42
UBR4-206ENST00000419533 C14orf132Q9NPU4 83 aa6.15□□□□□ -1.42
UBR4-206ENST00000419533 UBE2D4Q9Y2X8 147 aa6.15□□□□□ -1.42
UBR4-206ENST00000419533 TRAV23DV6A0A075B6W5 121 aa6.15□□□□□ -1.43
UBR4-206ENST00000419533 LINC00310P59036 64 aa6.15□□□□□ -1.43
UBR4-206ENST00000419533 LINC00643Q86TS7 51 aa6.15□□□□□ -1.43
UBR4-206ENST00000419533 C11orf21Q9P2W6 132 aa6.15□□□□□ -1.43
UBR4-206ENST00000419533 RAI1Q7Z5J4 1906 aaPredicted RBP6.15□□□□□ -1.43
UBR4-206ENST00000419533 MUC7Q8TAX7 377 aa6.15□□□□□ -1.43
UBR4-206ENST00000419533 DHRS4-AS1Q9P1J3 65 aa6.15□□□□□ -1.43
UBR4-206ENST00000419533 COL27A1Q8IZC6 1860 aaPredicted RBP6.14□□□□□ -1.43
UBR4-206ENST00000419533 UPK3BQ9BT76 320 aa6.14□□□□□ -1.43
UBR4-206ENST00000419533 PCNTO95613 3336 aa6.14□□□□□ -1.43
UBR4-206ENST00000419533 TIMM17BO60830 172 aa6.14□□□□□ -1.43
UBR4-206ENST00000419533 NRACQ8N912 160 aa6.14□□□□□ -1.43
UBR4-206ENST00000419533 COX17Q14061 63 aa6.13□□□□□ -1.43
UBR4-206ENST00000419533 SONP18583 2426 aaKnown RBP6.13□□□□□ -1.43
UBR4-206ENST00000419533 RETNQ9HD89 108 aa6.13□□□□□ -1.43
UBR4-206ENST00000419533 POLR2KP53803 58 aaKnown RBP6.13□□□□□ -1.43
UBR4-206ENST00000419533 WDR87Q6ZQQ6 2873 aa6.13□□□□□ -1.43
UBR4-206ENST00000419533 IGKV4-1P06312 121 aa6.13□□□□□ -1.43
UBR4-206ENST00000419533 PRM2P04554 102 aa6.12□□□□□ -1.43
UBR4-206ENST00000419533 LRRK2Q5S007 2527 aa6.12□□□□□ -1.43
UBR4-206ENST00000419533 IGKV2-28A0A075B6P5 120 aa6.12□□□□□ -1.43
UBR4-206ENST00000419533 IGKV2D-28P01615 120 aa6.12□□□□□ -1.43
UBR4-206ENST00000419533 SPATA3Q8NHX4 192 aa6.12□□□□□ -1.43
UBR4-206ENST00000419533 NHLRC4P0CG21 123 aaPredicted RBP6.12□□□□□ -1.43
UBR4-206ENST00000419533 KRTAP24-1Q3LI83 254 aa6.12□□□□□ -1.43
UBR4-206ENST00000419533 EDN2P20800 178 aa6.12□□□□□ -1.43
UBR4-206ENST00000419533 C6orf99Q4VX62 202 aa6.12□□□□□ -1.43
UBR4-206ENST00000419533 UQCRQO14949 82 aa6.11□□□□□ -1.43
UBR4-206ENST00000419533 Q8IZM0 81 aa6.11□□□□□ -1.43
UBR4-206ENST00000419533 SEC61GP60059 68 aa6.11□□□□□ -1.43
UBR4-206ENST00000419533 MAPKAPK5-AS1Q8N8E1 139 aa6.11□□□□□ -1.43
UBR4-206ENST00000419533 TEX49A0A1B0GTD5 131 aa6.11□□□□□ -1.43
UBR4-206ENST00000419533 MRPS12O15235 138 aaKnown RBP6.11□□□□□ -1.43
UBR4-206ENST00000419533 LINC00526Q96FQ7 95 aa6.11□□□□□ -1.43
UBR4-206ENST00000419533 CDC42SE2Q9NRR3 84 aa6.11□□□□□ -1.43
UBR4-206ENST00000419533 PLAC8L1A1L4L8 177 aa6.1□□□□□ -1.43
UBR4-206ENST00000419533 CNFNQ9BYD5 112 aa6.1□□□□□ -1.43
UBR4-206ENST00000419533 NDUFC2O95298 119 aa6.09□□□□□ -1.43
UBR4-206ENST00000419533 Q6ZTC4 211 aa6.09□□□□□ -1.43
UBR4-206ENST00000419533 WNK1Q9H4A3 2382 aa6.09□□□□□ -1.43
UBR4-206ENST00000419533 TRBV30A0A0K0K1B3 111 aa6.09□□□□□ -1.43
UBR4-206ENST00000419533 C1orf158Q8N1D5 194 aa6.09□□□□□ -1.43
UBR4-206ENST00000419533 TNRC18O15417 2968 aaPredicted RBP6.09□□□□□ -1.44
UBR4-206ENST00000419533 C5orf47Q569G3 176 aa6.09□□□□□ -1.44
UBR4-206ENST00000419533 CASC2Q6XLA1 102 aa6.09□□□□□ -1.44
UBR4-206ENST00000419533 PPDPFQ9H3Y8 114 aa6.09□□□□□ -1.44
UBR4-206ENST00000419533 HCFC1P51610 2035 aa6.09□□□□□ -1.44
UBR4-206ENST00000419533 IGLV5-52A0A0A0MRZ9 124 aa6.08□□□□□ -1.44
UBR4-206ENST00000419533 SLPIP03973 132 aa6.08□□□□□ -1.44
UBR4-206ENST00000419533 CYSRT1A8MQ03 144 aa6.08□□□□□ -1.44
UBR4-206ENST00000419533 EGFEM1PQ0D2K5 195 aa6.08□□□□□ -1.44
UBR4-206ENST00000419533 Q8N2B8 174 aa6.08□□□□□ -1.44
UBR4-206ENST00000419533 A8MZ25 164 aa6.08□□□□□ -1.44
UBR4-206ENST00000419533 FHL2Q14192 279 aa6.08□□□□□ -1.44
UBR4-206ENST00000419533 ATP5EP2Q5VTU8 51 aa6.08□□□□□ -1.44
UBR4-206ENST00000419533 RANBP2P49792 3224 aaKnown RBP6.08□□□□□ -1.44
UBR4-206ENST00000419533 RPL37AP8A6NKH3 93 aa6.07□□□□□ -1.44
UBR4-206ENST00000419533 XGP55808 180 aa6.07□□□□□ -1.44
UBR4-206ENST00000419533 RPL28P46779 137 aaKnown RBP6.07□□□□□ -1.44
UBR4-206ENST00000419533 CCKP06307 115 aa6.07□□□□□ -1.44
UBR4-206ENST00000419533 C3orf22Q8N5N4 141 aa6.07□□□□□ -1.44
UBR4-206ENST00000419533 TRIAP1O43715 76 aa6.07□□□□□ -1.44
UBR4-206ENST00000419533 ZNF73O43830 326 aaPredicted RBP6.07□□□□□ -1.44
UBR4-206ENST00000419533 C1orf134Q5TEV5 83 aa6.07□□□□□ -1.44
UBR4-206ENST00000419533 F8WDY8 70 aa6.07□□□□□ -1.44
UBR4-206ENST00000419533 FSHBP01225 129 aa6.06□□□□□ -1.44
UBR4-206ENST00000419533 M0QXV9 152 aa6.06□□□□□ -1.44
UBR4-206ENST00000419533 URB1-AS1Q96HZ7 61 aa6.06□□□□□ -1.44
UBR4-206ENST00000419533 ZNF292O60281 2723 aa6.06□□□□□ -1.44
UBR4-206ENST00000419533 Q6ZQY7 126 aa6.06□□□□□ -1.44
UBR4-206ENST00000419533 USP17L23D6RBM5 183 aa6.05□□□□□ -1.44
UBR4-206ENST00000419533 IMUPQ9GZP8 106 aa6.05□□□□□ -1.44
UBR4-206ENST00000419533 SPINK6Q6UWN8 80 aa6.05□□□□□ -1.44
UBR4-206ENST00000419533 BEAN1Q3B7T3 259 aa6.05□□□□□ -1.44
UBR4-206ENST00000419533 IGLV9-49A0A0B4J1Y8 123 aa6.04□□□□□ -1.44
UBR4-206ENST00000419533 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.04□□□□□ -1.44
UBR4-206ENST00000419533 LINC00242Q5T6M2 205 aa6.04□□□□□ -1.44
UBR4-206ENST00000419533 IGIPA6NJ69 53 aa6.04□□□□□ -1.44
UBR4-206ENST00000419533 SORL1Q92673 2214 aa6.04□□□□□ -1.44
UBR4-206ENST00000419533 A0A096LNT2 108 aa6.04□□□□□ -1.44
UBR4-206ENST00000419533 HRCT1Q6UXD1 115 aa6.04□□□□□ -1.44
UBR4-206ENST00000419533 UNQ6190/PRO20217Q6UXQ8 127 aa6.03□□□□□ -1.44
UBR4-206ENST00000419533 GAS8-AS1O95177 125 aa6.03□□□□□ -1.44
UBR4-206ENST00000419533 FHL3Q13643 280 aa6.03□□□□□ -1.44
UBR4-206ENST00000419533 SMIM11BQ8TCY0 68 aa6.03□□□□□ -1.44
UBR4-206ENST00000419533 DSCAML1Q8TD84 2053 aa6.03□□□□□ -1.44
UBR4-206ENST00000419533 CCDC179H3BU77 68 aa6.03□□□□□ -1.44
UBR4-206ENST00000419533 COX8CQ7Z4L0 72 aa6.03□□□□□ -1.44
UBR4-206ENST00000419533 WFDC10BQ8IUB3 73 aa6.03□□□□□ -1.44
UBR4-206ENST00000419533 KRTAP1-3Q8IUG1 177 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 181.7 ms