RNA–Protein interactions for RNA: ENST00000419180.6

NPIPB3-201, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 3

Gene NPIPB3, Length 910 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-201ENST00000419180 CYTL1Q9NRR1 136 aa5.33□□□□□ -1.56
NPIPB3-201ENST00000419180 DKK2Q9UBU2 259 aa5.33□□□□□ -1.56
NPIPB3-201ENST00000419180 IGHV3-21A0A0B4J1V1 117 aa5.32□□□□□ -1.56
NPIPB3-201ENST00000419180 TMEM256-PLSCR3K7ERE1 68 aa5.32□□□□□ -1.56
NPIPB3-201ENST00000419180 HBDP02042 147 aa5.32□□□□□ -1.56
NPIPB3-201ENST00000419180 FCGR2CP31995 323 aa5.32□□□□□ -1.56
NPIPB3-201ENST00000419180 RPL30P62888 115 aaKnown RBP5.32□□□□□ -1.56
NPIPB3-201ENST00000419180 CXCL6P80162 114 aa5.32□□□□□ -1.56
NPIPB3-201ENST00000419180 KLF9Q13886 244 aaPredicted RBP5.32□□□□□ -1.56
NPIPB3-201ENST00000419180 FP248Q71RG6 208 aaPredicted RBP5.32□□□□□ -1.56
NPIPB3-201ENST00000419180 TMEM256Q8N2U0 113 aa5.32□□□□□ -1.56
NPIPB3-201ENST00000419180 TIMM17AQ99595 171 aa5.32□□□□□ -1.56
NPIPB3-201ENST00000419180 PKHD1L1Q86WI1 4243 aa5.31□□□□□ -1.56
NPIPB3-201ENST00000419180 LRP2P98164 4655 aa5.31□□□□□ -1.56
NPIPB3-201ENST00000419180 UBE2L5PA0A1B0GUS4 154 aa5.31□□□□□ -1.56
NPIPB3-201ENST00000419180 TMEM14DPA8MWL7 114 aa5.31□□□□□ -1.56
NPIPB3-201ENST00000419180 INS-IGF2F8WCM5 200 aa5.31□□□□□ -1.56
NPIPB3-201ENST00000419180 NXPH4O95158 308 aa5.31□□□□□ -1.56
NPIPB3-201ENST00000419180 CTSGP08311 255 aa5.31□□□□□ -1.56
NPIPB3-201ENST00000419180 SRP19P09132 144 aaKnown RBP5.31□□□□□ -1.56
NPIPB3-201ENST00000419180 C3orf79P0CE67 100 aa5.31□□□□□ -1.56
NPIPB3-201ENST00000419180 COX8AP10176 69 aa5.31□□□□□ -1.56
NPIPB3-201ENST00000419180 KRTAP10-1P60331 282 aa5.31□□□□□ -1.56
NPIPB3-201ENST00000419180 RPL23P62829 140 aaKnown RBP5.31□□□□□ -1.56
NPIPB3-201ENST00000419180 UBE2L3P68036 154 aaKnown RBP5.31□□□□□ -1.56
NPIPB3-201ENST00000419180 ICAM4Q14773 271 aa5.31□□□□□ -1.56
NPIPB3-201ENST00000419180 CYB561D1Q8N8Q1 229 aa5.31□□□□□ -1.56
NPIPB3-201ENST00000419180 TSKUQ8WUA8 353 aa5.31□□□□□ -1.56
NPIPB3-201ENST00000419180 VSIG2Q96IQ7 327 aa5.31□□□□□ -1.56
NPIPB3-201ENST00000419180 LINC00588Q9Y4M8 146 aa5.31□□□□□ -1.56
NPIPB3-201ENST00000419180 IGHV3-66A0A0C4DH42 116 aa5.3□□□□□ -1.56
NPIPB3-201ENST00000419180 A0A0G2JRQ6 117 aa5.3□□□□□ -1.56
NPIPB3-201ENST00000419180 hADV29S1A0JD25 119 aa5.3□□□□□ -1.56
NPIPB3-201ENST00000419180 K7EIM0 57 aa5.3□□□□□ -1.56
NPIPB3-201ENST00000419180 K7EQG2 157 aa5.3□□□□□ -1.56
NPIPB3-201ENST00000419180 UBE2G1P62253 170 aa5.3□□□□□ -1.56
NPIPB3-201ENST00000419180 UBE2BP63146 152 aa5.3□□□□□ -1.56
NPIPB3-201ENST00000419180 HAMPP81172 84 aa5.3□□□□□ -1.56
NPIPB3-201ENST00000419180 CYCSP99999 105 aaKnown RBP5.3□□□□□ -1.56
NPIPB3-201ENST00000419180 MORN5Q5VZ52 161 aa5.3□□□□□ -1.56
NPIPB3-201ENST00000419180 ARHGAP5-AS1Q96IT6 56 aa5.3□□□□□ -1.56
NPIPB3-201ENST00000419180 UPK3BQ9BT76 320 aa5.3□□□□□ -1.56
NPIPB3-201ENST00000419180 TRAPPC1Q9Y5R8 145 aa5.3□□□□□ -1.56
NPIPB3-201ENST00000419180 TRAV1-1A0A0B4J248 108 aa5.29□□□□□ -1.56
NPIPB3-201ENST00000419180 IGLV2-14P01704 120 aa5.29□□□□□ -1.56
NPIPB3-201ENST00000419180 CCL18P55774 89 aa5.29□□□□□ -1.56
NPIPB3-201ENST00000419180 BRWD1-AS2P59051 145 aa5.29□□□□□ -1.56
NPIPB3-201ENST00000419180 WT1-ASQ06250 92 aa5.29□□□□□ -1.56
NPIPB3-201ENST00000419180 C1orf100Q5SVJ3 147 aa5.29□□□□□ -1.56
NPIPB3-201ENST00000419180 PRNTQ86SH4 94 aa5.29□□□□□ -1.56
NPIPB3-201ENST00000419180 C5orf38Q86SI9 138 aa5.29□□□□□ -1.56
NPIPB3-201ENST00000419180 NFE4Q86UQ8 179 aa5.29□□□□□ -1.56
NPIPB3-201ENST00000419180 NKAPP1Q8N9T2 125 aa5.29□□□□□ -1.56
NPIPB3-201ENST00000419180 TRGV9Q99603 122 aa5.29□□□□□ -1.56
NPIPB3-201ENST00000419180 Q9H3A6 140 aa5.29□□□□□ -1.56
NPIPB3-201ENST00000419180 TP73-AS1Q9UF72 201 aa5.29□□□□□ -1.56
NPIPB3-201ENST00000419180 TRAV3A0A0B4J244 114 aa5.28□□□□□ -1.56
NPIPB3-201ENST00000419180 NUPR1O60356 82 aa5.28□□□□□ -1.56
NPIPB3-201ENST00000419180 SCGB1C2P0DMR2 95 aa5.28□□□□□ -1.56
NPIPB3-201ENST00000419180 CCL20P78556 96 aa5.28□□□□□ -1.56
NPIPB3-201ENST00000419180 EIF4EBP1Q13541 118 aaPredicted RBP5.28□□□□□ -1.56
NPIPB3-201ENST00000419180 Q6ZQT7 251 aa5.28□□□□□ -1.56
NPIPB3-201ENST00000419180 Q6ZRN7 208 aaPredicted RBP5.28□□□□□ -1.56
NPIPB3-201ENST00000419180 SERP2Q8N6R1 65 aa5.28□□□□□ -1.56
NPIPB3-201ENST00000419180 OPRPNQ99935 248 aaPredicted RBP5.28□□□□□ -1.56
NPIPB3-201ENST00000419180 KRTAP9-2Q9BYQ4 174 aa5.28□□□□□ -1.56
NPIPB3-201ENST00000419180 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.27□□□□□ -1.57
NPIPB3-201ENST00000419180 COX7A2P2O60397 106 aa5.27□□□□□ -1.57
NPIPB3-201ENST00000419180 SERF1AO75920 110 aa5.27□□□□□ -1.57
NPIPB3-201ENST00000419180 IGKV1-5P01602 117 aa5.27□□□□□ -1.57
NPIPB3-201ENST00000419180 ACYP1P07311 99 aa5.27□□□□□ -1.57
NPIPB3-201ENST00000419180 HIST1H4AP62805 103 aaKnown RBP5.27□□□□□ -1.57
NPIPB3-201ENST00000419180 ZNF876PQ49A33 203 aa5.27□□□□□ -1.57
NPIPB3-201ENST00000419180 MIC13Q5XKP0 118 aa5.27□□□□□ -1.57
NPIPB3-201ENST00000419180 EBLN2Q6P2I7 272 aa5.27□□□□□ -1.57
NPIPB3-201ENST00000419180 C2orf91Q6ZV80 131 aa5.27□□□□□ -1.57
NPIPB3-201ENST00000419180 SLC25A29Q8N8R3 303 aa5.27□□□□□ -1.57
NPIPB3-201ENST00000419180 IGHV3OR16-12A0A075B7B8 117 aa5.26□□□□□ -1.57
NPIPB3-201ENST00000419180 IGLV9-49A0A0B4J1Y8 123 aa5.26□□□□□ -1.57
NPIPB3-201ENST00000419180 KRTAP9-6A0A140TA67 174 aa5.26□□□□□ -1.57
NPIPB3-201ENST00000419180 S100A4P26447 101 aaKnown RBP5.26□□□□□ -1.57
NPIPB3-201ENST00000419180 LINC00315P59091 139 aa5.26□□□□□ -1.57
NPIPB3-201ENST00000419180 C7orf65Q6ZTY9 151 aa5.26□□□□□ -1.57
NPIPB3-201ENST00000419180 BAGE3Q86Y29 109 aa5.26□□□□□ -1.57
NPIPB3-201ENST00000419180 BAGE2Q86Y30 109 aa5.26□□□□□ -1.57
NPIPB3-201ENST00000419180 SMIM4Q8WVI0 70 aa5.26□□□□□ -1.57
NPIPB3-201ENST00000419180 ODF3Q96PU9 254 aa5.26□□□□□ -1.57
NPIPB3-201ENST00000419180 HIGD1BQ9P298 99 aa5.26□□□□□ -1.57
NPIPB3-201ENST00000419180 H3BMM0 161 aa5.25□□□□□ -1.57
NPIPB3-201ENST00000419180 LINC00310P59036 64 aa5.25□□□□□ -1.57
NPIPB3-201ENST00000419180 INSL4Q14641 139 aa5.25□□□□□ -1.57
NPIPB3-201ENST00000419180 TP53TG3Q9ULZ0 132 aa5.25□□□□□ -1.57
NPIPB3-201ENST00000419180 LY96Q9Y6Y9 160 aa5.25□□□□□ -1.57
NPIPB3-201ENST00000419180 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.24□□□□□ -1.57
NPIPB3-201ENST00000419180 I3L2K1 104 aa5.24□□□□□ -1.57
NPIPB3-201ENST00000419180 TIMM17BO60830 172 aa5.24□□□□□ -1.57
NPIPB3-201ENST00000419180 DNAH10OSP0CZ25 163 aa5.24□□□□□ -1.57
NPIPB3-201ENST00000419180 ZNF138P52744 262 aa5.24□□□□□ -1.57
NPIPB3-201ENST00000419180 DEFB104AQ8WTQ1 72 aa5.24□□□□□ -1.57
NPIPB3-201ENST00000419180 DIRC1Q969H9 104 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms