RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 NF1P21359 2839 aa8.35□□□□□ -1.07
CSPG4P3Y-201ENST00000418188 H7C423 109 aa8.34□□□□□ -1.07
CSPG4P3Y-201ENST00000418188 LST1O00453 97 aa8.34□□□□□ -1.07
CSPG4P3Y-201ENST00000418188 GAGE2BQ13066 116 aa8.34□□□□□ -1.07
CSPG4P3Y-201ENST00000418188 GAGE2EQ4V326 116 aa8.34□□□□□ -1.07
CSPG4P3Y-201ENST00000418188 IL17DQ8TAD2 202 aa8.34□□□□□ -1.07
CSPG4P3Y-201ENST00000418188 GAGE2DQ9UEU5 116 aa8.34□□□□□ -1.07
CSPG4P3Y-201ENST00000418188 APCP25054 2843 aa8.34□□□□□ -1.07
CSPG4P3Y-201ENST00000418188 TRBV6-4A0A1B0GX49 114 aa8.34□□□□□ -1.07
CSPG4P3Y-201ENST00000418188 PF4P02776 101 aa8.33□□□□□ -1.08
CSPG4P3Y-201ENST00000418188 LOC100131303A0A0U1RQF7 123 aa8.33□□□□□ -1.08
CSPG4P3Y-201ENST00000418188 DEFB130BP0DP73 79 aa8.33□□□□□ -1.08
CSPG4P3Y-201ENST00000418188 DEFB130AP0DP74 79 aa8.33□□□□□ -1.08
CSPG4P3Y-201ENST00000418188 RNASE1P07998 156 aaKnown RBP8.33□□□□□ -1.08
CSPG4P3Y-201ENST00000418188 HIST2H2BCQ6DN03 193 aa8.33□□□□□ -1.08
CSPG4P3Y-201ENST00000418188 ANAPC13Q9BS18 74 aa8.32□□□□□ -1.08
CSPG4P3Y-201ENST00000418188 IGLV1-51P01701 117 aa8.32□□□□□ -1.08
CSPG4P3Y-201ENST00000418188 LINC00158P58513 81 aa8.32□□□□□ -1.08
CSPG4P3Y-201ENST00000418188 CRPP02741 224 aa8.31□□□□□ -1.08
CSPG4P3Y-201ENST00000418188 TTC32Q5I0X7 151 aa8.31□□□□□ -1.08
CSPG4P3Y-201ENST00000418188 COX7A2LO14548 114 aa8.31□□□□□ -1.08
CSPG4P3Y-201ENST00000418188 COX7B2Q8TF08 81 aa8.31□□□□□ -1.08
CSPG4P3Y-201ENST00000418188 FAM110AQ9BQ89 295 aa8.31□□□□□ -1.08
CSPG4P3Y-201ENST00000418188 HIVEP2P31629 2446 aa8.31□□□□□ -1.08
CSPG4P3Y-201ENST00000418188 FAM19A3Q7Z5A8 133 aa8.3□□□□□ -1.08
CSPG4P3Y-201ENST00000418188 TRAV13-2A0A0B4J235 113 aa8.3□□□□□ -1.08
CSPG4P3Y-201ENST00000418188 C16orf95Q9H693 158 aa8.3□□□□□ -1.08
CSPG4P3Y-201ENST00000418188 TRBV6-8A0A0A6YYG3 113 aa8.29□□□□□ -1.08
CSPG4P3Y-201ENST00000418188 C15orf53Q8NAA6 179 aa8.29□□□□□ -1.08
CSPG4P3Y-201ENST00000418188 GIG44P09565 113 aaPredicted RBP8.29□□□□□ -1.08
CSPG4P3Y-201ENST00000418188 FN1P02751 2386 aaKnown RBP8.29□□□□□ -1.08
CSPG4P3Y-201ENST00000418188 F5H768 121 aa8.29□□□□□ -1.08
CSPG4P3Y-201ENST00000418188 MIR7-3HGQ8N6C7 128 aa8.29□□□□□ -1.08
CSPG4P3Y-201ENST00000418188 OVOL2Q9BRP0 275 aa8.28□□□□□ -1.08
CSPG4P3Y-201ENST00000418188 PLA2G2AP14555 144 aa8.28□□□□□ -1.08
CSPG4P3Y-201ENST00000418188 DNAL4O96015 105 aa8.28□□□□□ -1.08
CSPG4P3Y-201ENST00000418188 SOSTDC1Q6X4U4 206 aa8.28□□□□□ -1.08
CSPG4P3Y-201ENST00000418188 C5orf38Q86SI9 138 aa8.28□□□□□ -1.08
CSPG4P3Y-201ENST00000418188 SND1-IT1Q9HBX3 110 aa8.28□□□□□ -1.08
CSPG4P3Y-201ENST00000418188 NOTCH2Q04721 2471 aa8.27□□□□□ -1.09
CSPG4P3Y-201ENST00000418188 CRLF1O75462 422 aa8.27□□□□□ -1.09
CSPG4P3Y-201ENST00000418188 C6orf226Q5I0X4 101 aa8.27□□□□□ -1.09
CSPG4P3Y-201ENST00000418188 CUBNO60494 3623 aa8.27□□□□□ -1.09
CSPG4P3Y-201ENST00000418188 PFN2P35080 140 aa8.27□□□□□ -1.09
CSPG4P3Y-201ENST00000418188 PLAC8L1A1L4L8 177 aa8.27□□□□□ -1.09
CSPG4P3Y-201ENST00000418188 IGLV4-60A0A075B6I1 120 aa8.26□□□□□ -1.09
CSPG4P3Y-201ENST00000418188 FHL2Q14192 279 aa8.26□□□□□ -1.09
CSPG4P3Y-201ENST00000418188 OR13C6PQ8NH95 151 aa8.26□□□□□ -1.09
CSPG4P3Y-201ENST00000418188 LINC01600Q96MT4 127 aa8.26□□□□□ -1.09
CSPG4P3Y-201ENST00000418188 C11orf68Q9H3H3 251 aaKnown RBP8.26□□□□□ -1.09
CSPG4P3Y-201ENST00000418188 GYPEP15421 78 aa8.26□□□□□ -1.09
CSPG4P3Y-201ENST00000418188 PAX4O43316 350 aa8.25□□□□□ -1.09
CSPG4P3Y-201ENST00000418188 BAALC-AS2P0C853 105 aa8.25□□□□□ -1.09
CSPG4P3Y-201ENST00000418188 HILS1P60008 231 aa8.25□□□□□ -1.09
CSPG4P3Y-201ENST00000418188 SS18Q15532 418 aa8.25□□□□□ -1.09
CSPG4P3Y-201ENST00000418188 C19orf73Q9NVV2 129 aa8.25□□□□□ -1.09
CSPG4P3Y-201ENST00000418188 TRAV26-1A0A087WT03 109 aa8.25□□□□□ -1.09
CSPG4P3Y-201ENST00000418188 CSNK1G2-AS1Q8NCQ2 148 aa8.25□□□□□ -1.09
CSPG4P3Y-201ENST00000418188 TRACP01848 142 aa8.24□□□□□ -1.09
CSPG4P3Y-201ENST00000418188 XCL1P47992 114 aa8.24□□□□□ -1.09
CSPG4P3Y-201ENST00000418188 SHISA2Q6UWI4 295 aa8.24□□□□□ -1.09
CSPG4P3Y-201ENST00000418188 NIPBLQ6KC79 2804 aaeCLIP8.23□□□□□ -1.09
CSPG4P3Y-201ENST00000418188 SETXQ7Z333 2677 aaKnown RBP8.23□□□□□ -1.09
CSPG4P3Y-201ENST00000418188 FAM240AA0A1B0GVK7 77 aa8.23□□□□□ -1.09
CSPG4P3Y-201ENST00000418188 CITED1Q99966 193 aa8.23□□□□□ -1.09
CSPG4P3Y-201ENST00000418188 A0A096LPF7 62 aa8.23□□□□□ -1.09
CSPG4P3Y-201ENST00000418188 FAM222AQ5U5X8 452 aa8.23□□□□□ -1.09
CSPG4P3Y-201ENST00000418188 IBA57-AS1B1ANH7 110 aa8.23□□□□□ -1.09
CSPG4P3Y-201ENST00000418188 IGHV3OR16-9A0A0B4J2B5 98 aa8.22□□□□□ -1.09
CSPG4P3Y-201ENST00000418188 ACYP1P07311 99 aa8.22□□□□□ -1.09
CSPG4P3Y-201ENST00000418188 CLPSL2Q6UWE3 100 aa8.22□□□□□ -1.09
CSPG4P3Y-201ENST00000418188 A0A087WZ39 114 aa8.22□□□□□ -1.09
CSPG4P3Y-201ENST00000418188 LINC00959A0A1B0GUT2 108 aa8.21□□□□□ -1.09
CSPG4P3Y-201ENST00000418188 MRPL23Q16540 153 aaKnown RBP8.21□□□□□ -1.09
CSPG4P3Y-201ENST00000418188 KIR2DL5BQ8NHK3 375 aa8.21□□□□□ -1.09
CSPG4P3Y-201ENST00000418188 PRO0255Q9UI72 69 aa8.21□□□□□ -1.09
CSPG4P3Y-201ENST00000418188 J3QKU1 62 aa8.21□□□□□ -1.09
CSPG4P3Y-201ENST00000418188 INAFM2P0DMQ5 153 aa8.21□□□□□ -1.09
CSPG4P3Y-201ENST00000418188 NDUFV3P56181 108 aaKnown RBP8.21□□□□□ -1.09
CSPG4P3Y-201ENST00000418188 KRTAP1-1Q07627 177 aa8.21□□□□□ -1.09
CSPG4P3Y-201ENST00000418188 Q9HAA7 133 aa8.2□□□□□ -1.1
CSPG4P3Y-201ENST00000418188 RPL28P46779 137 aaKnown RBP8.2□□□□□ -1.1
CSPG4P3Y-201ENST00000418188 CCL18P55774 89 aa8.2□□□□□ -1.1
CSPG4P3Y-201ENST00000418188 Q6Q795 121 aa8.2□□□□□ -1.1
CSPG4P3Y-201ENST00000418188 LINC00337Q8N6G1 96 aa8.19□□□□□ -1.1
CSPG4P3Y-201ENST00000418188 PPDPFQ9H3Y8 114 aa8.19□□□□□ -1.1
CSPG4P3Y-201ENST00000418188 H0YGX0 51 aa8.19□□□□□ -1.1
CSPG4P3Y-201ENST00000418188 CFAP161Q6P656 301 aa8.19□□□□□ -1.1
CSPG4P3Y-201ENST00000418188 SMIM9A6NGZ8 99 aa8.19□□□□□ -1.1
CSPG4P3Y-201ENST00000418188 DEFB121Q5J5C9 76 aa8.18□□□□□ -1.1
CSPG4P3Y-201ENST00000418188 MALP21145 153 aa8.18□□□□□ -1.1
CSPG4P3Y-201ENST00000418188 GAGE2AQ6NT46 116 aa8.18□□□□□ -1.1
CSPG4P3Y-201ENST00000418188 ZNF469Q96JG9 3925 aaPredicted RBP8.18□□□□□ -1.1
CSPG4P3Y-201ENST00000418188 SMIM11BQ8TCY0 68 aa8.18□□□□□ -1.1
CSPG4P3Y-201ENST00000418188 ITPR2Q14571 2701 aa8.18□□□□□ -1.1
CSPG4P3Y-201ENST00000418188 SMR3AQ99954 134 aa8.17□□□□□ -1.1
CSPG4P3Y-201ENST00000418188 FAM218AQ96MZ4 157 aa8.17□□□□□ -1.1
CSPG4P3Y-201ENST00000418188 LINC00482Q8N8I6 264 aa8.17□□□□□ -1.1
CSPG4P3Y-201ENST00000418188 DEFB4AO15263 64 aa8.16□□□□□ -1.1
CSPG4P3Y-201ENST00000418188 DEFB135Q30KP9 77 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms