RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 CRCT1Q9UGL9 99 aa3.93□□□□□ -1.78
ECHDC1-206ENST00000417628 TEX49A0A1B0GTD5 131 aa3.92□□□□□ -1.78
ECHDC1-206ENST00000417628 LYRM9A8MSI8 78 aa3.92□□□□□ -1.78
ECHDC1-206ENST00000417628 NDUFB3O43676 98 aa3.92□□□□□ -1.78
ECHDC1-206ENST00000417628 CFC1BP0CG36 223 aa3.92□□□□□ -1.78
ECHDC1-206ENST00000417628 CFC1P0CG37 223 aa3.92□□□□□ -1.78
ECHDC1-206ENST00000417628 COX7A1P24310 79 aa3.92□□□□□ -1.78
ECHDC1-206ENST00000417628 C2orf82Q6UX34 121 aa3.92□□□□□ -1.78
ECHDC1-206ENST00000417628 FAM216BQ8N7L0 139 aa3.92□□□□□ -1.78
ECHDC1-206ENST00000417628 ZNF714Q96N38 554 aa3.92□□□□□ -1.78
ECHDC1-206ENST00000417628 SORL1Q92673 2214 aa3.92□□□□□ -1.78
ECHDC1-206ENST00000417628 TMSB15BA0A087X1C1 80 aa3.91□□□□□ -1.78
ECHDC1-206ENST00000417628 TRBV7-1A0A0A6YYK4 115 aa3.91□□□□□ -1.78
ECHDC1-206ENST00000417628 TRAV3A0A0B4J244 114 aa3.91□□□□□ -1.78
ECHDC1-206ENST00000417628 IBA57-AS1B1ANH7 110 aa3.91□□□□□ -1.78
ECHDC1-206ENST00000417628 LST1O00453 97 aa3.91□□□□□ -1.78
ECHDC1-206ENST00000417628 TCRAP04437 139 aa3.91□□□□□ -1.78
ECHDC1-206ENST00000417628 COX6CP09669 75 aa3.91□□□□□ -1.78
ECHDC1-206ENST00000417628 MKXQ8IYA7 352 aa3.91□□□□□ -1.78
ECHDC1-206ENST00000417628 SRSF12Q8WXF0 261 aaKnown RBP3.91□□□□□ -1.78
ECHDC1-206ENST00000417628 MRPL53Q96EL3 112 aaKnown RBP3.91□□□□□ -1.78
ECHDC1-206ENST00000417628 SPACA5Q96QH8 159 aa3.91□□□□□ -1.78
ECHDC1-206ENST00000417628 OVOL2Q9BRP0 275 aa3.91□□□□□ -1.78
ECHDC1-206ENST00000417628 TMEM243Q9BU79 118 aa3.91□□□□□ -1.78
ECHDC1-206ENST00000417628 APLNQ9ULZ1 77 aa3.91□□□□□ -1.78
ECHDC1-206ENST00000417628 A0A0J9YX75 114 aa3.9□□□□□ -1.79
ECHDC1-206ENST00000417628 TRBV10-3A0A0K0K1G6 114 aa3.9□□□□□ -1.79
ECHDC1-206ENST00000417628 IGHV3-30P01768 117 aa3.9□□□□□ -1.79
ECHDC1-206ENST00000417628 IGHV3-30-5P0DP03 117 aa3.9□□□□□ -1.79
ECHDC1-206ENST00000417628 C1orf134Q5TEV5 83 aa3.9□□□□□ -1.79
ECHDC1-206ENST00000417628 MIC13Q5XKP0 118 aa3.9□□□□□ -1.79
ECHDC1-206ENST00000417628 LINC00305Q7Z4B0 112 aa3.9□□□□□ -1.79
ECHDC1-206ENST00000417628 KTN1-AS1Q86SY8 53 aa3.9□□□□□ -1.79
ECHDC1-206ENST00000417628 SLC25A29Q8N8R3 303 aa3.9□□□□□ -1.79
ECHDC1-206ENST00000417628 DCANP1Q8TF63 244 aa3.9□□□□□ -1.79
ECHDC1-206ENST00000417628 ZNF799Q96GE5 643 aa3.9□□□□□ -1.79
ECHDC1-206ENST00000417628 CCL13Q99616 98 aa3.9□□□□□ -1.79
ECHDC1-206ENST00000417628 CYSTM1Q9H1C7 97 aa3.9□□□□□ -1.79
ECHDC1-206ENST00000417628 DNAH17Q9UFH2 4485 aa3.89□□□□□ -1.79
ECHDC1-206ENST00000417628 IGKV1-6A0A0C4DH72 117 aa3.89□□□□□ -1.79
ECHDC1-206ENST00000417628 A0A0J9YY99 117 aa3.89□□□□□ -1.79
ECHDC1-206ENST00000417628 H7BZZ5 65 aa3.89□□□□□ -1.79
ECHDC1-206ENST00000417628 H7C423 109 aa3.89□□□□□ -1.79
ECHDC1-206ENST00000417628 IGLV1-51P01701 117 aa3.89□□□□□ -1.79
ECHDC1-206ENST00000417628 DEFA4P12838 97 aa3.89□□□□□ -1.79
ECHDC1-206ENST00000417628 ZNF32P17041 273 aa3.89□□□□□ -1.79
ECHDC1-206ENST00000417628 LGALS3P17931 250 aaKnown RBP3.89□□□□□ -1.79
ECHDC1-206ENST00000417628 ZNF816Q0VGE8 651 aaPredicted RBP3.89□□□□□ -1.79
ECHDC1-206ENST00000417628 DAZ2Q13117 558 aaKnown RBP3.89□□□□□ -1.79
ECHDC1-206ENST00000417628 S100A7L2Q5SY68 101 aa3.89□□□□□ -1.79
ECHDC1-206ENST00000417628 Q6ZR54 194 aa3.89□□□□□ -1.79
ECHDC1-206ENST00000417628 COX8CQ7Z4L0 72 aa3.89□□□□□ -1.79
ECHDC1-206ENST00000417628 DAZ4Q86SG3 579 aaKnown RBP3.89□□□□□ -1.79
ECHDC1-206ENST00000417628 Q8N9P0 234 aaPredicted RBP3.89□□□□□ -1.79
ECHDC1-206ENST00000417628 TMEM263Q8WUH6 116 aaKnown RBP3.89□□□□□ -1.79
ECHDC1-206ENST00000417628 FAM167A-AS1Q96KT0 104 aa3.89□□□□□ -1.79
ECHDC1-206ENST00000417628 PGLYRP4Q96LB8 373 aa3.89□□□□□ -1.79
ECHDC1-206ENST00000417628 CNFNQ9BYD5 112 aa3.89□□□□□ -1.79
ECHDC1-206ENST00000417628 DAZ3Q9NR90 486 aaKnown RBP3.89□□□□□ -1.79
ECHDC1-206ENST00000417628 MRPL35Q9NZE8 188 aaKnown RBP3.89□□□□□ -1.79
ECHDC1-206ENST00000417628 IGLV9-49A0A0B4J1Y8 123 aa3.88□□□□□ -1.79
ECHDC1-206ENST00000417628 SDHAF1A6NFY7 115 aa3.88□□□□□ -1.79
ECHDC1-206ENST00000417628 ZNF815PA8K554 130 aa3.88□□□□□ -1.79
ECHDC1-206ENST00000417628 ODF3BA8MYP8 253 aa3.88□□□□□ -1.79
ECHDC1-206ENST00000417628 NDUFS5O43920 106 aa3.88□□□□□ -1.79
ECHDC1-206ENST00000417628 COX7A2P2O60397 106 aa3.88□□□□□ -1.79
ECHDC1-206ENST00000417628 TSHBP01222 138 aa3.88□□□□□ -1.79
ECHDC1-206ENST00000417628 DUTP33316 252 aaKnown RBP3.88□□□□□ -1.79
ECHDC1-206ENST00000417628 ZNF138P52744 262 aa3.88□□□□□ -1.79
ECHDC1-206ENST00000417628 SUB1P53999 127 aaKnown RBP eCLIP3.88□□□□□ -1.79
ECHDC1-206ENST00000417628 ORMDL2Q53FV1 153 aa3.88□□□□□ -1.79
ECHDC1-206ENST00000417628 PVRIGQ6DKI7 326 aa3.88□□□□□ -1.79
ECHDC1-206ENST00000417628 SCGB1D4Q6XE38 83 aa3.88□□□□□ -1.79
ECHDC1-206ENST00000417628 MIR17HGQ75NE6 70 aa3.88□□□□□ -1.79
ECHDC1-206ENST00000417628 Q86TA4 180 aa3.88□□□□□ -1.79
ECHDC1-206ENST00000417628 SMCR5Q8TEV8 140 aa3.88□□□□□ -1.79
ECHDC1-206ENST00000417628 TIMM21Q9BVV7 248 aa3.88□□□□□ -1.79
ECHDC1-206ENST00000417628 TTTY13Q9BZ97 58 aa3.88□□□□□ -1.79
ECHDC1-206ENST00000417628 TRAV7A0A075B6U4 112 aa3.87□□□□□ -1.79
ECHDC1-206ENST00000417628 TRBV27A0A0K0K1C4 114 aa3.87□□□□□ -1.79
ECHDC1-206ENST00000417628 A0A1B0GUV1 79 aa3.87□□□□□ -1.79
ECHDC1-206ENST00000417628 TMEM223A0PJW6 202 aa3.87□□□□□ -1.79
ECHDC1-206ENST00000417628 D6R8Y8 96 aa3.87□□□□□ -1.79
ECHDC1-206ENST00000417628 ATP6V0E1O15342 81 aa3.87□□□□□ -1.79
ECHDC1-206ENST00000417628 GAS8-AS1O95177 125 aa3.87□□□□□ -1.79
ECHDC1-206ENST00000417628 CCKP06307 115 aa3.87□□□□□ -1.79
ECHDC1-206ENST00000417628 PRSS1P07477 247 aa3.87□□□□□ -1.79
ECHDC1-206ENST00000417628 IGHV1-8P0DP01 117 aa3.87□□□□□ -1.79
ECHDC1-206ENST00000417628 CRIP2P52943 208 aaPredicted RBP3.87□□□□□ -1.79
ECHDC1-206ENST00000417628 Q8IYB0 196 aa3.87□□□□□ -1.79
ECHDC1-206ENST00000417628 CD177Q8N6Q3 437 aa3.87□□□□□ -1.79
ECHDC1-206ENST00000417628 TMEM75Q8N9X5 138 aa3.87□□□□□ -1.79
ECHDC1-206ENST00000417628 UBALD1Q8TB05 177 aa3.87□□□□□ -1.79
ECHDC1-206ENST00000417628 UBE2E2Q96LR5 201 aa3.87□□□□□ -1.79
ECHDC1-206ENST00000417628 SLC50A1Q9BRV3 221 aa3.87□□□□□ -1.79
ECHDC1-206ENST00000417628 MOB4Q9Y3A3 225 aa3.87□□□□□ -1.79
ECHDC1-206ENST00000417628 LRP1BQ9NZR2 4599 aa3.87□□□□□ -1.79
ECHDC1-206ENST00000417628 FAT4Q6V0I7 4981 aa3.86□□□□□ -1.79
ECHDC1-206ENST00000417628 IGLV2-18A0A075B6J9 118 aa3.86□□□□□ -1.79
ECHDC1-206ENST00000417628 TRAV13-2A0A0B4J235 113 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms