RNA–Protein interactions for RNA: ENST00000416982.1

LINC01287-201, Transcript of long intergenic non-protein coding RNA 1287, humanhuman

TSL 2 BASIC

Gene LINC01287, Length 2,624 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01287-201ENST00000416982 TRAV12-3A0A0B4J271 114 aa7.4□□□□□ -1.22
LINC01287-201ENST00000416982 FAM223BA6NKX1 122 aa7.4□□□□□ -1.22
LINC01287-201ENST00000416982 TMEM258P61165 79 aa7.4□□□□□ -1.22
LINC01287-201ENST00000416982 FAM223AQ8IWN6 122 aa7.4□□□□□ -1.22
LINC01287-201ENST00000416982 DPH3Q96FX2 82 aa7.4□□□□□ -1.22
LINC01287-201ENST00000416982 NDUFA1O15239 70 aa7.4□□□□□ -1.23
LINC01287-201ENST00000416982 OXTP01178 125 aa7.4□□□□□ -1.23
LINC01287-201ENST00000416982 BAALC-AS2P0C853 105 aa7.4□□□□□ -1.23
LINC01287-201ENST00000416982 UPK3BQ9BT76 320 aa7.4□□□□□ -1.23
LINC01287-201ENST00000416982 RPL18AQ02543 176 aaKnown RBP7.39□□□□□ -1.23
LINC01287-201ENST00000416982 RNASE13Q5GAN3 156 aaKnown RBP7.39□□□□□ -1.23
LINC01287-201ENST00000416982 LINC00308Q8TCZ7 52 aa7.39□□□□□ -1.23
LINC01287-201ENST00000416982 USP17L23D6RBM5 183 aa7.39□□□□□ -1.23
LINC01287-201ENST00000416982 J3QKU1 62 aa7.39□□□□□ -1.23
LINC01287-201ENST00000416982 INAFM2P0DMQ5 153 aa7.39□□□□□ -1.23
LINC01287-201ENST00000416982 Q8N2B8 174 aa7.39□□□□□ -1.23
LINC01287-201ENST00000416982 FAM218AQ96MZ4 157 aa7.38□□□□□ -1.23
LINC01287-201ENST00000416982 J3QLI3 93 aa7.37□□□□□ -1.23
LINC01287-201ENST00000416982 VPREB1P12018 145 aa7.37□□□□□ -1.23
LINC01287-201ENST00000416982 SOSTDC1Q6X4U4 206 aa7.37□□□□□ -1.23
LINC01287-201ENST00000416982 IGLV5-45A0A087WSX0 123 aa7.36□□□□□ -1.23
LINC01287-201ENST00000416982 IGLV1-40P01703 118 aa7.36□□□□□ -1.23
LINC01287-201ENST00000416982 UBE2D4Q9Y2X8 147 aa7.36□□□□□ -1.23
LINC01287-201ENST00000416982 Q5XG85 94 aa7.36□□□□□ -1.23
LINC01287-201ENST00000416982 C18orf65Q6ZTR6 163 aa7.36□□□□□ -1.23
LINC01287-201ENST00000416982 SERP2Q8N6R1 65 aa7.36□□□□□ -1.23
LINC01287-201ENST00000416982 RHPN1-AS1Q9BWJ2 59 aa7.36□□□□□ -1.23
LINC01287-201ENST00000416982 SERTAD4-AS1Q5TG53 156 aa7.35□□□□□ -1.23
LINC01287-201ENST00000416982 CHCHD7Q9BUK0 85 aa7.35□□□□□ -1.23
LINC01287-201ENST00000416982 CDKN2A-AS1Q9UH64 79 aa7.35□□□□□ -1.23
LINC01287-201ENST00000416982 HIVEP1P15822 2718 aa7.35□□□□□ -1.23
LINC01287-201ENST00000416982 TRAV13-1A0A0B4J241 112 aa7.35□□□□□ -1.23
LINC01287-201ENST00000416982 CIRBPQ14011 172 aaKnown RBP7.35□□□□□ -1.23
LINC01287-201ENST00000416982 DEFB136Q30KP8 78 aa7.35□□□□□ -1.23
LINC01287-201ENST00000416982 Q6JHZ5 121 aa7.35□□□□□ -1.23
LINC01287-201ENST00000416982 Q6YL49 198 aa7.35□□□□□ -1.23
LINC01287-201ENST00000416982 IGHV1OR15-1A0A075B7D0 117 aa7.34□□□□□ -1.23
LINC01287-201ENST00000416982 PSMB8P28062 276 aa7.34□□□□□ -1.23
LINC01287-201ENST00000416982 CFHR3Q02985 330 aa7.34□□□□□ -1.23
LINC01287-201ENST00000416982 DSCR8Q96T75 97 aa7.34□□□□□ -1.23
LINC01287-201ENST00000416982 SMR3AQ99954 134 aa7.34□□□□□ -1.23
LINC01287-201ENST00000416982 TRAV12-2A0A075B6T6 113 aa7.34□□□□□ -1.23
LINC01287-201ENST00000416982 IGLV5-39A0A0G2JS06 123 aa7.34□□□□□ -1.23
LINC01287-201ENST00000416982 ZNF415Q09FC8 603 aa7.34□□□□□ -1.23
LINC01287-201ENST00000416982 C4orf26Q17RF5 130 aa7.34□□□□□ -1.23
LINC01287-201ENST00000416982 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.34□□□□□ -1.23
LINC01287-201ENST00000416982 USMG5Q96IX5 58 aa7.34□□□□□ -1.23
LINC01287-201ENST00000416982 TEP1Q99973 2627 aaKnown RBP7.34□□□□□ -1.23
LINC01287-201ENST00000416982 NACAE9PAV3 2078 aa7.34□□□□□ -1.24
LINC01287-201ENST00000416982 FSHBP01225 129 aa7.33□□□□□ -1.24
LINC01287-201ENST00000416982 LINC00336Q6ZUF6 198 aa7.33□□□□□ -1.24
LINC01287-201ENST00000416982 PRIMA1Q86XR5 153 aa7.33□□□□□ -1.24
LINC01287-201ENST00000416982 Q9H8V8 135 aa7.33□□□□□ -1.24
LINC01287-201ENST00000416982 PROK1P58294 105 aa7.32□□□□□ -1.24
LINC01287-201ENST00000416982 COPS9Q8WXC6 57 aa7.32□□□□□ -1.24
LINC01287-201ENST00000416982 ZNF702PQ9H963 129 aa7.32□□□□□ -1.24
LINC01287-201ENST00000416982 VWFP04275 2813 aa7.32□□□□□ -1.24
LINC01287-201ENST00000416982 C2CD3Q4AC94 2353 aa7.32□□□□□ -1.24
LINC01287-201ENST00000416982 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.32□□□□□ -1.24
LINC01287-201ENST00000416982 IGKV3D-7A0A0C4DH55 119 aa7.32□□□□□ -1.24
LINC01287-201ENST00000416982 IGKV2-29A2NJV5 120 aaPredicted RBP7.32□□□□□ -1.24
LINC01287-201ENST00000416982 SYNJ2BPP57105 145 aa7.32□□□□□ -1.24
LINC01287-201ENST00000416982 LINC01561Q8N1V8 128 aa7.32□□□□□ -1.24
LINC01287-201ENST00000416982 Q9HAA7 133 aa7.32□□□□□ -1.24
LINC01287-201ENST00000416982 OBSCN-AS1Q96MR7 158 aa7.31□□□□□ -1.24
LINC01287-201ENST00000416982 LINC00467Q9BRT7 94 aa7.31□□□□□ -1.24
LINC01287-201ENST00000416982 TENM1Q9UKZ4 2725 aa7.31□□□□□ -1.24
LINC01287-201ENST00000416982 C9orf129Q5T035 196 aaKnown RBP7.31□□□□□ -1.24
LINC01287-201ENST00000416982 CD164L2Q6UWJ8 174 aa7.31□□□□□ -1.24
LINC01287-201ENST00000416982 HRCT1Q6UXD1 115 aa7.31□□□□□ -1.24
LINC01287-201ENST00000416982 ATRQ13535 2644 aa7.31□□□□□ -1.24
LINC01287-201ENST00000416982 A0A087WVE0 104 aa7.31□□□□□ -1.24
LINC01287-201ENST00000416982 DNAL4O96015 105 aa7.31□□□□□ -1.24
LINC01287-201ENST00000416982 COX6A2Q02221 97 aa7.31□□□□□ -1.24
LINC01287-201ENST00000416982 LINC00846Q9NV44 126 aa7.31□□□□□ -1.24
LINC01287-201ENST00000416982 Q9UF83 564 aa7.31□□□□□ -1.24
LINC01287-201ENST00000416982 NSD1Q96L73 2696 aaPredicted RBP7.3□□□□□ -1.24
LINC01287-201ENST00000416982 IGHV3-73A0A0B4J1V6 119 aa7.3□□□□□ -1.24
LINC01287-201ENST00000416982 RPL28P46779 137 aaKnown RBP7.3□□□□□ -1.24
LINC01287-201ENST00000416982 ZNF625Q96I27 306 aaPredicted RBP7.3□□□□□ -1.24
LINC01287-201ENST00000416982 ANK3Q12955 4377 aaKnown RBP7.3□□□□□ -1.24
LINC01287-201ENST00000416982 IGKV3-20P01619 116 aa7.3□□□□□ -1.24
LINC01287-201ENST00000416982 ESM1Q9NQ30 184 aa7.3□□□□□ -1.24
LINC01287-201ENST00000416982 H3BUA1 57 aa7.29□□□□□ -1.24
LINC01287-201ENST00000416982 SPINK13Q1W4C9 94 aa7.29□□□□□ -1.24
LINC01287-201ENST00000416982 Q6ZSN1 163 aa7.29□□□□□ -1.24
LINC01287-201ENST00000416982 C14orf132Q9NPU4 83 aa7.29□□□□□ -1.24
LINC01287-201ENST00000416982 SMIM1B2RUZ4 78 aa7.28□□□□□ -1.24
LINC01287-201ENST00000416982 K7EMT4 169 aa7.28□□□□□ -1.24
LINC01287-201ENST00000416982 HOXD3P31249 432 aaPredicted RBP7.28□□□□□ -1.24
LINC01287-201ENST00000416982 SLURP1P55000 103 aa7.28□□□□□ -1.24
LINC01287-201ENST00000416982 IGHV3OR16-12A0A075B7B8 117 aa7.28□□□□□ -1.24
LINC01287-201ENST00000416982 KRTAP1-1Q07627 177 aa7.28□□□□□ -1.24
LINC01287-201ENST00000416982 LINC00242Q5T6M2 205 aa7.28□□□□□ -1.24
LINC01287-201ENST00000416982 FHL2Q14192 279 aa7.27□□□□□ -1.25
LINC01287-201ENST00000416982 FAM19A3Q7Z5A8 133 aa7.27□□□□□ -1.25
LINC01287-201ENST00000416982 OVOL2Q9BRP0 275 aa7.27□□□□□ -1.25
LINC01287-201ENST00000416982 A0A087WYN8 130 aa7.27□□□□□ -1.25
LINC01287-201ENST00000416982 NDUFC2-KCTD14E9PQ53 114 aa7.27□□□□□ -1.25
LINC01287-201ENST00000416982 RBMY1A1P0DJD3 496 aaKnown RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms