RNA–Protein interactions for RNA: ENST00000416742.5

LINC00494-201, long intergenic non-protein coding RNA 494, humanhuman

TSL 1 (best) BASIC

Gene LINC00494, Length 3,544 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00494-201ENST00000416742 CSDC2Q9Y534 153 aaKnown RBP7.03□□□□□ -1.28
LINC00494-201ENST00000416742 ATRQ13535 2644 aa7.03□□□□□ -1.28
LINC00494-201ENST00000416742 TRBV20-1A0A075B6N2 111 aa7.03□□□□□ -1.28
LINC00494-201ENST00000416742 MEIG1Q5JSS6 88 aa7.03□□□□□ -1.28
LINC00494-201ENST00000416742 SPANXDQ9BXN6 97 aa7.03□□□□□ -1.28
LINC00494-201ENST00000416742 SPANXCQ9NY87 97 aa7.03□□□□□ -1.28
LINC00494-201ENST00000416742 VWFP04275 2813 aa7.03□□□□□ -1.28
LINC00494-201ENST00000416742 DEFB4AO15263 64 aa7.02□□□□□ -1.28
LINC00494-201ENST00000416742 GTSF1LQ9H1H1 148 aa7.02□□□□□ -1.28
LINC00494-201ENST00000416742 A0A096LPF7 62 aa7.02□□□□□ -1.29
LINC00494-201ENST00000416742 SMIM1B2RUZ4 78 aa7.02□□□□□ -1.29
LINC00494-201ENST00000416742 NDUFA1O15239 70 aa7.02□□□□□ -1.29
LINC00494-201ENST00000416742 PRIMA1Q86XR5 153 aa7.02□□□□□ -1.29
LINC00494-201ENST00000416742 TOMM7Q9P0U1 55 aa7.02□□□□□ -1.29
LINC00494-201ENST00000416742 CIDEAO60543 219 aa7.02□□□□□ -1.29
LINC00494-201ENST00000416742 IGLV4-60A0A075B6I1 120 aa7.01□□□□□ -1.29
LINC00494-201ENST00000416742 C9orf66Q5T8R8 295 aa7.01□□□□□ -1.29
LINC00494-201ENST00000416742 NSD1Q96L73 2696 aaPredicted RBP7.01□□□□□ -1.29
LINC00494-201ENST00000416742 TRBV6-8A0A0A6YYG3 113 aa7.01□□□□□ -1.29
LINC00494-201ENST00000416742 IGLV5-39A0A0G2JS06 123 aa7.01□□□□□ -1.29
LINC00494-201ENST00000416742 GYPEP15421 78 aa7.01□□□□□ -1.29
LINC00494-201ENST00000416742 C9JAW5 83 aa7.01□□□□□ -1.29
LINC00494-201ENST00000416742 TMEM262E9PQX1 116 aa7.01□□□□□ -1.29
LINC00494-201ENST00000416742 DEFB135Q30KP9 77 aa7.01□□□□□ -1.29
LINC00494-201ENST00000416742 X6R8D5 127 aa7□□□□□ -1.29
LINC00494-201ENST00000416742 HIVEP1P15822 2718 aa7□□□□□ -1.29
LINC00494-201ENST00000416742 TRIAP1O43715 76 aa6.99□□□□□ -1.29
LINC00494-201ENST00000416742 FAM222AQ5U5X8 452 aa6.99□□□□□ -1.29
LINC00494-201ENST00000416742 ATP6V0E2Q8NHE4 81 aa6.99□□□□□ -1.29
LINC00494-201ENST00000416742 TENM1Q9UKZ4 2725 aa6.99□□□□□ -1.29
LINC00494-201ENST00000416742 F5H768 121 aa6.99□□□□□ -1.29
LINC00494-201ENST00000416742 TIMM17BO60830 172 aa6.99□□□□□ -1.29
LINC00494-201ENST00000416742 IFITM1P13164 125 aa6.99□□□□□ -1.29
LINC00494-201ENST00000416742 FOXI1Q12951 378 aa6.99□□□□□ -1.29
LINC00494-201ENST00000416742 KIR2DL5BQ8NHK3 375 aa6.99□□□□□ -1.29
LINC00494-201ENST00000416742 RPL13AP40429 203 aaKnown RBP6.98□□□□□ -1.29
LINC00494-201ENST00000416742 FAM19A3Q7Z5A8 133 aa6.98□□□□□ -1.29
LINC00494-201ENST00000416742 LINC00308Q8TCZ7 52 aa6.98□□□□□ -1.29
LINC00494-201ENST00000416742 ICOSQ9Y6W8 199 aa6.98□□□□□ -1.29
LINC00494-201ENST00000416742 SLC25A20O43772 301 aa6.98□□□□□ -1.29
LINC00494-201ENST00000416742 C5orf38Q86SI9 138 aa6.98□□□□□ -1.29
LINC00494-201ENST00000416742 GAGE12HA6NDE8 117 aa6.98□□□□□ -1.29
LINC00494-201ENST00000416742 H7C423 109 aa6.98□□□□□ -1.29
LINC00494-201ENST00000416742 ATXN8Q156A1 80 aa6.97□□□□□ -1.29
LINC00494-201ENST00000416742 COX6CP09669 75 aa6.97□□□□□ -1.29
LINC00494-201ENST00000416742 CLPSL2Q6UWE3 100 aa6.97□□□□□ -1.29
LINC00494-201ENST00000416742 TRBV30A0A0K0K1B3 111 aa6.97□□□□□ -1.29
LINC00494-201ENST00000416742 TEN1Q86WV5 123 aa6.97□□□□□ -1.29
LINC00494-201ENST00000416742 TEP1Q99973 2627 aaKnown RBP6.96□□□□□ -1.29
LINC00494-201ENST00000416742 PAX4O43316 350 aa6.96□□□□□ -1.29
LINC00494-201ENST00000416742 LINC01620Q4KN68 170 aa6.96□□□□□ -1.29
LINC00494-201ENST00000416742 ANKRD29Q8N6D5 301 aa6.96□□□□□ -1.29
LINC00494-201ENST00000416742 PRO0255Q9UI72 69 aa6.96□□□□□ -1.29
LINC00494-201ENST00000416742 SMIM9A6NGZ8 99 aa6.96□□□□□ -1.3
LINC00494-201ENST00000416742 SOSTDC1Q6X4U4 206 aa6.96□□□□□ -1.3
LINC00494-201ENST00000416742 COX7B2Q8TF08 81 aa6.96□□□□□ -1.3
LINC00494-201ENST00000416742 CLEC2BQ92478 149 aa6.96□□□□□ -1.3
LINC00494-201ENST00000416742 PPDPFLQ8WWR9 84 aa6.96□□□□□ -1.3
LINC00494-201ENST00000416742 CARD19Q96LW7 228 aa6.96□□□□□ -1.3
LINC00494-201ENST00000416742 HTN3P15516 51 aa6.95□□□□□ -1.3
LINC00494-201ENST00000416742 SIGMAR1Q99720 223 aa6.95□□□□□ -1.3
LINC00494-201ENST00000416742 C11orf68Q9H3H3 251 aaKnown RBP6.95□□□□□ -1.3
LINC00494-201ENST00000416742 HERV-K104P63124 156 aa6.95□□□□□ -1.3
LINC00494-201ENST00000416742 LINC00612Q8N6U2 182 aa6.95□□□□□ -1.3
LINC00494-201ENST00000416742 XCL1P47992 114 aa6.94□□□□□ -1.3
LINC00494-201ENST00000416742 APOC4P55056 127 aa6.94□□□□□ -1.3
LINC00494-201ENST00000416742 IGHV4-28A0A0C4DH34 117 aa6.94□□□□□ -1.3
LINC00494-201ENST00000416742 LINC00158P58513 81 aa6.94□□□□□ -1.3
LINC00494-201ENST00000416742 DAD1P61803 113 aa6.94□□□□□ -1.3
LINC00494-201ENST00000416742 LINC00959A0A1B0GUT2 108 aa6.94□□□□□ -1.3
LINC00494-201ENST00000416742 IGHV3OR16-9A0A0B4J2B5 98 aa6.93□□□□□ -1.3
LINC00494-201ENST00000416742 F8P00451 2351 aa6.93□□□□□ -1.3
LINC00494-201ENST00000416742 LYRM9A8MSI8 78 aa6.93□□□□□ -1.3
LINC00494-201ENST00000416742 MIR7-3HGQ8N6C7 128 aa6.93□□□□□ -1.3
LINC00494-201ENST00000416742 NTN5Q8WTR8 489 aaPredicted RBP6.93□□□□□ -1.3
LINC00494-201ENST00000416742 RNF183Q96D59 192 aa6.93□□□□□ -1.3
LINC00494-201ENST00000416742 CITED1Q99966 193 aa6.93□□□□□ -1.3
LINC00494-201ENST00000416742 FLNBO75369 2602 aaKnown RBP6.93□□□□□ -1.3
LINC00494-201ENST00000416742 PFN2P35080 140 aa6.93□□□□□ -1.3
LINC00494-201ENST00000416742 COPS9Q8WXC6 57 aa6.93□□□□□ -1.3
LINC00494-201ENST00000416742 SS18Q15532 418 aa6.92□□□□□ -1.3
LINC00494-201ENST00000416742 C6orf226Q5I0X4 101 aa6.92□□□□□ -1.3
LINC00494-201ENST00000416742 C2orf82Q6UX34 121 aa6.92□□□□□ -1.3
LINC00494-201ENST00000416742 CELA1Q9UNI1 258 aa6.92□□□□□ -1.3
LINC00494-201ENST00000416742 TRAV26-1A0A087WT03 109 aa6.91□□□□□ -1.3
LINC00494-201ENST00000416742 TRBV10-2A0A0K0K1G8 114 aa6.91□□□□□ -1.3
LINC00494-201ENST00000416742 SPATA25Q9BR10 227 aa6.91□□□□□ -1.3
LINC00494-201ENST00000416742 A0A087WZ39 114 aa6.91□□□□□ -1.3
LINC00494-201ENST00000416742 TRRAPQ9Y4A5 3859 aa6.91□□□□□ -1.3
LINC00494-201ENST00000416742 IGLV10-54A0A075B6I4 117 aa6.9□□□□□ -1.3
LINC00494-201ENST00000416742 Q8N3U1 123 aa6.9□□□□□ -1.3
LINC00494-201ENST00000416742 ATP5G1P05496 136 aa6.9□□□□□ -1.31
LINC00494-201ENST00000416742 IGHV4-30-4P0DP06 118 aa6.9□□□□□ -1.31
LINC00494-201ENST00000416742 LINC00269Q8N2A0 174 aa6.9□□□□□ -1.31
LINC00494-201ENST00000416742 LST1O00453 97 aa6.89□□□□□ -1.31
LINC00494-201ENST00000416742 ANGP03950 147 aaKnown RBP6.89□□□□□ -1.31
LINC00494-201ENST00000416742 TEX49A0A1B0GTD5 131 aa6.89□□□□□ -1.31
LINC00494-201ENST00000416742 SND1-IT1Q9HBX3 110 aa6.89□□□□□ -1.31
LINC00494-201ENST00000416742 A0A1B0GUV1 79 aa6.89□□□□□ -1.31
LINC00494-201ENST00000416742 SPART-AS1P0CW21 52 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 170.2 ms