RNA–Protein interactions for RNA: ENST00000414368.2

LINC00343-201, long intergenic non-protein coding RNA 343, humanhuman

TSL 2

Gene LINC00343, Length 864 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-201ENST00000414368 GAGE2AQ6NT46 116 aa4.54□□□□□ -1.68
LINC00343-201ENST00000414368 NFE4Q86UQ8 179 aa4.54□□□□□ -1.68
LINC00343-201ENST00000414368 MAPKAPK5-AS1Q8N8E1 139 aa4.54□□□□□ -1.68
LINC00343-201ENST00000414368 OPRPNQ99935 248 aaPredicted RBP4.54□□□□□ -1.68
LINC00343-201ENST00000414368 GAGE2DQ9UEU5 116 aa4.54□□□□□ -1.68
LINC00343-201ENST00000414368 PKHD1P08F94 4074 aa4.54□□□□□ -1.68
LINC00343-201ENST00000414368 IGLV10-54A0A075B6I4 117 aa4.53□□□□□ -1.68
LINC00343-201ENST00000414368 IGKV3OR2-268A0A0C4DH90 116 aa4.53□□□□□ -1.68
LINC00343-201ENST00000414368 H7C423 109 aa4.53□□□□□ -1.68
LINC00343-201ENST00000414368 ATP6V1G1O75348 118 aa4.53□□□□□ -1.68
LINC00343-201ENST00000414368 CRPP02741 224 aa4.53□□□□□ -1.68
LINC00343-201ENST00000414368 REG3AQ06141 175 aa4.53□□□□□ -1.68
LINC00343-201ENST00000414368 RNASE13Q5GAN3 156 aaKnown RBP4.53□□□□□ -1.68
LINC00343-201ENST00000414368 LINC00336Q6ZUF6 198 aa4.53□□□□□ -1.68
LINC00343-201ENST00000414368 OR5A1Q8NGJ0 315 aa4.53□□□□□ -1.68
LINC00343-201ENST00000414368 FAM104AQ969W3 186 aa4.53□□□□□ -1.68
LINC00343-201ENST00000414368 PRR34Q9NV39 138 aa4.53□□□□□ -1.68
LINC00343-201ENST00000414368 UBE2D4Q9Y2X8 147 aa4.53□□□□□ -1.68
LINC00343-201ENST00000414368 HECTD4Q9Y4D8 3996 aa4.53□□□□□ -1.68
LINC00343-201ENST00000414368 A0A1B0GVY2 172 aa4.52□□□□□ -1.69
LINC00343-201ENST00000414368 LECT2O14960 151 aa4.52□□□□□ -1.69
LINC00343-201ENST00000414368 PSCAO43653 123 aa4.52□□□□□ -1.69
LINC00343-201ENST00000414368 TRGC2P03986 189 aa4.52□□□□□ -1.69
LINC00343-201ENST00000414368 FUSP35637 526 aaKnown RBP eCLIP4.52□□□□□ -1.69
LINC00343-201ENST00000414368 Q0VG73 95 aa4.52□□□□□ -1.69
LINC00343-201ENST00000414368 WFDC2Q14508 124 aa4.52□□□□□ -1.69
LINC00343-201ENST00000414368 KRTAP26-1Q6PEX3 210 aa4.52□□□□□ -1.69
LINC00343-201ENST00000414368 Q75L30 129 aa4.52□□□□□ -1.69
LINC00343-201ENST00000414368 MRPL52Q86TS9 123 aaKnown RBP4.52□□□□□ -1.69
LINC00343-201ENST00000414368 C18orf32Q8TCD1 76 aa4.52□□□□□ -1.69
LINC00343-201ENST00000414368 BAALCQ8WXS3 180 aa4.52□□□□□ -1.69
LINC00343-201ENST00000414368 TMEM101Q96IK0 257 aa4.52□□□□□ -1.69
LINC00343-201ENST00000414368 NXT2Q9NPJ8 142 aaKnown RBP4.52□□□□□ -1.69
LINC00343-201ENST00000414368 CDC42SE2Q9NRR3 84 aa4.52□□□□□ -1.69
LINC00343-201ENST00000414368 A0A087WTM6 91 aa4.51□□□□□ -1.69
LINC00343-201ENST00000414368 LRCOL1A6NCL2 159 aa4.51□□□□□ -1.69
LINC00343-201ENST00000414368 ZNF25P17030 456 aaPredicted RBP4.51□□□□□ -1.69
LINC00343-201ENST00000414368 MIAQ16674 131 aa4.51□□□□□ -1.69
LINC00343-201ENST00000414368 Q6ZUT4 128 aa4.51□□□□□ -1.69
LINC00343-201ENST00000414368 ZNF664Q8N3J9 261 aa4.51□□□□□ -1.69
LINC00343-201ENST00000414368 LINC01546A6NGU7 62 aa4.5□□□□□ -1.69
LINC00343-201ENST00000414368 S100A1P23297 94 aa4.5□□□□□ -1.69
LINC00343-201ENST00000414368 ORMDL2Q53FV1 153 aa4.5□□□□□ -1.69
LINC00343-201ENST00000414368 ZC2HC1BQ5TFG8 222 aa4.5□□□□□ -1.69
LINC00343-201ENST00000414368 C2orf66Q6UXQ4 117 aa4.5□□□□□ -1.69
LINC00343-201ENST00000414368 FA2HQ7L5A8 372 aa4.5□□□□□ -1.69
LINC00343-201ENST00000414368 RMI2Q96E14 147 aa4.5□□□□□ -1.69
LINC00343-201ENST00000414368 TIMM21Q9BVV7 248 aa4.5□□□□□ -1.69
LINC00343-201ENST00000414368 CSDC2Q9Y534 153 aaKnown RBP4.5□□□□□ -1.69
LINC00343-201ENST00000414368 DYNC1H1Q14204 4646 aaKnown RBP4.49□□□□□ -1.69
LINC00343-201ENST00000414368 IGLV4-3A0A075B6K6 122 aa4.49□□□□□ -1.69
LINC00343-201ENST00000414368 TRAV13-1A0A0B4J241 112 aa4.49□□□□□ -1.69
LINC00343-201ENST00000414368 TRAV8-4A0A0B4J246 113 aa4.49□□□□□ -1.69
LINC00343-201ENST00000414368 LINC00959A0A1B0GUT2 108 aa4.49□□□□□ -1.69
LINC00343-201ENST00000414368 IGIPA6NJ69 53 aa4.49□□□□□ -1.69
LINC00343-201ENST00000414368 K7EMI3 77 aa4.49□□□□□ -1.69
LINC00343-201ENST00000414368 LINC00614P0C842 121 aa4.49□□□□□ -1.69
LINC00343-201ENST00000414368 XCL1P47992 114 aa4.49□□□□□ -1.69
LINC00343-201ENST00000414368 PMCHL1Q16048 86 aa4.49□□□□□ -1.69
LINC00343-201ENST00000414368 SPATA12Q7Z6I5 190 aa4.49□□□□□ -1.69
LINC00343-201ENST00000414368 CHCHD10Q8WYQ3 142 aaPredicted RBP4.49□□□□□ -1.69
LINC00343-201ENST00000414368 SPANXA1Q9NS26 97 aa4.49□□□□□ -1.69
LINC00343-201ENST00000414368 CYSLTR1Q9Y271 337 aa4.49□□□□□ -1.69
LINC00343-201ENST00000414368 DNAH5Q8TE73 4624 aa4.49□□□□□ -1.69
LINC00343-201ENST00000414368 A0A096LNJ9 63 aa4.48□□□□□ -1.69
LINC00343-201ENST00000414368 CCL25O15444 150 aa4.48□□□□□ -1.69
LINC00343-201ENST00000414368 MRPS36P82909 103 aaKnown RBP4.48□□□□□ -1.69
LINC00343-201ENST00000414368 SMAGPQ0VAQ4 97 aa4.48□□□□□ -1.69
LINC00343-201ENST00000414368 SS18Q15532 418 aa4.48□□□□□ -1.69
LINC00343-201ENST00000414368 TOMM6Q96B49 74 aa4.48□□□□□ -1.69
LINC00343-201ENST00000414368 SCGB3A1Q96QR1 104 aa4.48□□□□□ -1.69
LINC00343-201ENST00000414368 PYGO1Q9Y3Y4 419 aa4.48□□□□□ -1.69
LINC00343-201ENST00000414368 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.47□□□□□ -1.69
LINC00343-201ENST00000414368 LINC00173Q6ZV60 143 aa4.47□□□□□ -1.69
LINC00343-201ENST00000414368 BAGE3Q86Y29 109 aa4.47□□□□□ -1.69
LINC00343-201ENST00000414368 Q8N814 137 aa4.47□□□□□ -1.69
LINC00343-201ENST00000414368 TMEM141Q96I45 108 aa4.47□□□□□ -1.69
LINC00343-201ENST00000414368 KRTAP2-2Q9BYT5 123 aa4.47□□□□□ -1.69
LINC00343-201ENST00000414368 IGLV5-45A0A087WSX0 123 aa4.46□□□□□ -1.7
LINC00343-201ENST00000414368 IFITM10A6NMD0 228 aa4.46□□□□□ -1.7
LINC00343-201ENST00000414368 C1orf196B1AJZ1 125 aa4.46□□□□□ -1.7
LINC00343-201ENST00000414368 NUPR1O60356 82 aa4.46□□□□□ -1.7
LINC00343-201ENST00000414368 SERF1AO75920 110 aa4.46□□□□□ -1.7
LINC00343-201ENST00000414368 PRSS1P07477 247 aa4.46□□□□□ -1.7
LINC00343-201ENST00000414368 G0S2P27469 103 aa4.46□□□□□ -1.7
LINC00343-201ENST00000414368 RAB5BP61020 215 aa4.46□□□□□ -1.7
LINC00343-201ENST00000414368 RPL24P83731 157 aaKnown RBP4.46□□□□□ -1.7
LINC00343-201ENST00000414368 COX6A2Q02221 97 aa4.46□□□□□ -1.7
LINC00343-201ENST00000414368 ERASQ7Z444 233 aa4.46□□□□□ -1.7
LINC00343-201ENST00000414368 FAM19A2Q8N3H0 131 aa4.46□□□□□ -1.7
LINC00343-201ENST00000414368 AMELXQ99217 191 aa4.46□□□□□ -1.7
LINC00343-201ENST00000414368 VCX2Q9H322 139 aa4.46□□□□□ -1.7
LINC00343-201ENST00000414368 LRP1BQ9NZR2 4599 aa4.46□□□□□ -1.7
LINC00343-201ENST00000414368 C16orf90A8MZG2 172 aa4.45□□□□□ -1.7
LINC00343-201ENST00000414368 HIST1H2BKO60814 126 aa4.45□□□□□ -1.7
LINC00343-201ENST00000414368 HBDP02042 147 aa4.45□□□□□ -1.7
LINC00343-201ENST00000414368 HIST1H2BJP06899 126 aa4.45□□□□□ -1.7
LINC00343-201ENST00000414368 HIST1H2BOP23527 126 aa4.45□□□□□ -1.7
LINC00343-201ENST00000414368 HIST1H2BBP33778 126 aa4.45□□□□□ -1.7
LINC00343-201ENST00000414368 UBE2D1P51668 147 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms