RNA–Protein interactions for RNA: ENST00000413951.5

SF1-207, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 623 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-207ENST00000413951 IGLV10-54A0A075B6I4 117 aa10.83□□□□□ -0.68
SF1-207ENST00000413951 CHCHD1Q96BP2 118 aaKnown RBP10.83□□□□□ -0.68
SF1-207ENST00000413951 OPRPNQ99935 248 aaPredicted RBP10.83□□□□□ -0.68
SF1-207ENST00000413951 USP17L23D6RBM5 183 aa10.82□□□□□ -0.68
SF1-207ENST00000413951 CCL25O15444 150 aa10.82□□□□□ -0.68
SF1-207ENST00000413951 RNASE13Q5GAN3 156 aaKnown RBP10.82□□□□□ -0.68
SF1-207ENST00000413951 ERASQ7Z444 233 aa10.82□□□□□ -0.68
SF1-207ENST00000413951 CHCHD10Q8WYQ3 142 aaPredicted RBP10.82□□□□□ -0.68
SF1-207ENST00000413951 IGKV3OR2-268A0A0C4DH90 116 aa10.81□□□□□ -0.68
SF1-207ENST00000413951 LINC00310P59036 64 aa10.81□□□□□ -0.68
SF1-207ENST00000413951 LINC00173Q6ZV60 143 aa10.81□□□□□ -0.68
SF1-207ENST00000413951 TMEM141Q96I45 108 aa10.81□□□□□ -0.68
SF1-207ENST00000413951 AMELXQ99217 191 aa10.81□□□□□ -0.68
SF1-207ENST00000413951 HBDP02042 147 aa10.8□□□□□ -0.68
SF1-207ENST00000413951 C9orf163Q8N9P6 203 aa10.8□□□□□ -0.68
SF1-207ENST00000413951 C1orf196B1AJZ1 125 aa10.79□□□□□ -0.68
SF1-207ENST00000413951 HIST1H2BKO60814 126 aa10.79□□□□□ -0.68
SF1-207ENST00000413951 HIST1H2BJP06899 126 aa10.79□□□□□ -0.68
SF1-207ENST00000413951 HIST1H2BOP23527 126 aa10.79□□□□□ -0.68
SF1-207ENST00000413951 HIST1H2BBP33778 126 aa10.79□□□□□ -0.68
SF1-207ENST00000413951 HIST1H2BDP58876 126 aa10.79□□□□□ -0.68
SF1-207ENST00000413951 RPL37AP61513 92 aaKnown RBP10.79□□□□□ -0.68
SF1-207ENST00000413951 HIST1H2BCP62807 126 aa10.79□□□□□ -0.68
SF1-207ENST00000413951 FOXI1Q12951 378 aa10.79□□□□□ -0.68
SF1-207ENST00000413951 SS18Q15532 418 aa10.79□□□□□ -0.68
SF1-207ENST00000413951 HIST2H2BEQ16778 126 aa10.79□□□□□ -0.68
SF1-207ENST00000413951 PDZD11Q5EBL8 140 aa10.79□□□□□ -0.68
SF1-207ENST00000413951 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.79□□□□□ -0.68
SF1-207ENST00000413951 BAGE3Q86Y29 109 aa10.79□□□□□ -0.68
SF1-207ENST00000413951 HIST1H2BHQ93079 126 aa10.79□□□□□ -0.68
SF1-207ENST00000413951 HIST1H2BNQ99877 126 aa10.79□□□□□ -0.68
SF1-207ENST00000413951 HIST1H2BMQ99879 126 aa10.79□□□□□ -0.68
SF1-207ENST00000413951 GAGE12HA6NDE8 117 aa10.78□□□□□ -0.68
SF1-207ENST00000413951 IFITM10A6NMD0 228 aa10.78□□□□□ -0.68
SF1-207ENST00000413951 KRTAP10-4P60372 401 aaPredicted RBP10.78□□□□□ -0.68
SF1-207ENST00000413951 PAPPA-AS1Q5QFB9 102 aa10.78□□□□□ -0.68
SF1-207ENST00000413951 CD164L2Q6UWJ8 174 aa10.78□□□□□ -0.68
SF1-207ENST00000413951 TEX43Q6ZNM6 134 aa10.78□□□□□ -0.68
SF1-207ENST00000413951 SCGB3A1Q96QR1 104 aa10.78□□□□□ -0.68
SF1-207ENST00000413951 TRAV13-1A0A0B4J241 112 aa10.77□□□□□ -0.69
SF1-207ENST00000413951 PRSS1P07477 247 aa10.77□□□□□ -0.69
SF1-207ENST00000413951 XCL1P47992 114 aa10.77□□□□□ -0.69
SF1-207ENST00000413951 PMCHL1Q16048 86 aa10.77□□□□□ -0.69
SF1-207ENST00000413951 Q6ZN92 141 aa10.77□□□□□ -0.69
SF1-207ENST00000413951 SERF1AO75920 110 aa10.76□□□□□ -0.69
SF1-207ENST00000413951 UBE2D1P51668 147 aa10.76□□□□□ -0.69
SF1-207ENST00000413951 FAM19A3Q7Z5A8 133 aa10.76□□□□□ -0.69
SF1-207ENST00000413951 VCX2Q9H322 139 aa10.76□□□□□ -0.69
SF1-207ENST00000413951 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.75□□□□□ -0.69
SF1-207ENST00000413951 C2orf88Q9BSF0 95 aa10.75□□□□□ -0.69
SF1-207ENST00000413951 IGHV3OR16-9A0A0B4J2B5 98 aa10.74□□□□□ -0.69
SF1-207ENST00000413951 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.74□□□□□ -0.69
SF1-207ENST00000413951 HSBP1O75506 76 aa10.74□□□□□ -0.69
SF1-207ENST00000413951 CNBPP62633 177 aaKnown RBP10.74□□□□□ -0.69
SF1-207ENST00000413951 LINC00242Q5T6M2 205 aa10.74□□□□□ -0.69
SF1-207ENST00000413951 ZC2HC1BQ5TFG8 222 aa10.74□□□□□ -0.69
SF1-207ENST00000413951 C15orf56Q8N910 161 aa10.73□□□□□ -0.69
SF1-207ENST00000413951 hDV102S1A0JD36 115 aa10.72□□□□□ -0.69
SF1-207ENST00000413951 NUPR1O60356 82 aa10.72□□□□□ -0.69
SF1-207ENST00000413951 ATP5LO75964 103 aa10.72□□□□□ -0.69
SF1-207ENST00000413951 COA6Q5JTJ3 125 aaKnown RBP10.72□□□□□ -0.69
SF1-207ENST00000413951 SDIM1Q6ZPB5 146 aa10.72□□□□□ -0.69
SF1-207ENST00000413951 CST9LQ9H4G1 147 aa10.72□□□□□ -0.69
SF1-207ENST00000413951 IGHV3-64A0A075B6Q5 118 aa10.71□□□□□ -0.69
SF1-207ENST00000413951 PMVKQ15126 192 aa10.71□□□□□ -0.69
SF1-207ENST00000413951 CFAP161Q6P656 301 aa10.71□□□□□ -0.69
SF1-207ENST00000413951 FAM19A2Q8N3H0 131 aa10.71□□□□□ -0.69
SF1-207ENST00000413951 DPH3Q96FX2 82 aa10.71□□□□□ -0.69
SF1-207ENST00000413951 GVQW2A0A096LPI5 108 aaPredicted RBP10.7□□□□□ -0.7
SF1-207ENST00000413951 COX7A2LO14548 114 aa10.7□□□□□ -0.7
SF1-207ENST00000413951 PLA2G2DQ9UNK4 145 aa10.7□□□□□ -0.7
SF1-207ENST00000413951 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.69□□□□□ -0.7
SF1-207ENST00000413951 A0A087WZ39 114 aa10.68□□□□□ -0.7
SF1-207ENST00000413951 IGHV1-58A0A0C4DH39 117 aa10.68□□□□□ -0.7
SF1-207ENST00000413951 SEC11AP67812 179 aa10.68□□□□□ -0.7
SF1-207ENST00000413951 COX6A2Q02221 97 aa10.68□□□□□ -0.7
SF1-207ENST00000413951 CIRBPQ14011 172 aaKnown RBP10.68□□□□□ -0.7
SF1-207ENST00000413951 Q6ZRU5 148 aa10.68□□□□□ -0.7
SF1-207ENST00000413951 IGLV5-45A0A087WSX0 123 aa10.67□□□□□ -0.7
SF1-207ENST00000413951 HERVK_113P63121 156 aa10.67□□□□□ -0.7
SF1-207ENST00000413951 C5orf38Q86SI9 138 aa10.67□□□□□ -0.7
SF1-207ENST00000413951 LINC01561Q8N1V8 128 aa10.67□□□□□ -0.7
SF1-207ENST00000413951 IFI27L1Q96BM0 104 aa10.67□□□□□ -0.7
SF1-207ENST00000413951 A0A0J9YXV3 536 aa10.66□□□□□ -0.7
SF1-207ENST00000413951 TINCRA0A1B0GVN0 87 aa10.66□□□□□ -0.7
SF1-207ENST00000413951 LRP1Q07954 4544 aaKnown RBP10.65□□□□□ -0.7
SF1-207ENST00000413951 TRAV12-1A0A0B4J245 112 aa10.65□□□□□ -0.7
SF1-207ENST00000413951 LEPROTL1O95214 131 aa10.65□□□□□ -0.7
SF1-207ENST00000413951 IGLC3P0DOY3 106 aa10.65□□□□□ -0.7
SF1-207ENST00000413951 PACRGQ96M98 296 aaPredicted RBP10.65□□□□□ -0.7
SF1-207ENST00000413951 IGLV4-69A0A075B6H9 119 aa10.64□□□□□ -0.71
SF1-207ENST00000413951 SLPIP03973 132 aa10.64□□□□□ -0.71
SF1-207ENST00000413951 MALP21145 153 aa10.64□□□□□ -0.71
SF1-207ENST00000413951 OR10D4PQ8NGN7 298 aa10.64□□□□□ -0.71
SF1-207ENST00000413951 C7orf33Q8WU49 177 aa10.64□□□□□ -0.71
SF1-207ENST00000413951 PKIGQ9Y2B9 76 aa10.64□□□□□ -0.71
SF1-207ENST00000413951 APOMO95445 188 aa10.63□□□□□ -0.71
SF1-207ENST00000413951 HIGD2BQ4VC39 106 aa10.63□□□□□ -0.71
SF1-207ENST00000413951 GEMIN7Q9H840 131 aaKnown RBP10.63□□□□□ -0.71
SF1-207ENST00000413951 CDKN2A-AS1Q9UH64 79 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms