RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 HERVK_113P63121 156 aa10.36□□□□□ -0.75
SEMA3F-202ENST00000413852 BEAN1Q3B7T3 259 aa10.36□□□□□ -0.75
SEMA3F-202ENST00000413852 LINC00337Q8N6G1 96 aa10.36□□□□□ -0.75
SEMA3F-202ENST00000413852 SLPIP03973 132 aa10.36□□□□□ -0.75
SEMA3F-202ENST00000413852 DEFB114Q30KQ6 69 aa10.36□□□□□ -0.75
SEMA3F-202ENST00000413852 A0A087WYN8 130 aa10.35□□□□□ -0.75
SEMA3F-202ENST00000413852 KRTAP10-9P60411 292 aa10.35□□□□□ -0.75
SEMA3F-202ENST00000413852 MIR7-3HGQ8N6C7 128 aa10.35□□□□□ -0.75
SEMA3F-202ENST00000413852 ACANP16112 2415 aa10.35□□□□□ -0.75
SEMA3F-202ENST00000413852 PFN2P35080 140 aa10.35□□□□□ -0.75
SEMA3F-202ENST00000413852 RNF152Q8N8N0 203 aa10.35□□□□□ -0.75
SEMA3F-202ENST00000413852 CDC42SE2Q9NRR3 84 aa10.35□□□□□ -0.75
SEMA3F-202ENST00000413852 Q6YL49 198 aa10.34□□□□□ -0.75
SEMA3F-202ENST00000413852 PRORYQ9H606 182 aa10.34□□□□□ -0.75
SEMA3F-202ENST00000413852 APCP25054 2843 aa10.33□□□□□ -0.76
SEMA3F-202ENST00000413852 PRB1P04280 392 aa10.33□□□□□ -0.76
SEMA3F-202ENST00000413852 STHQ8IWL8 128 aa10.33□□□□□ -0.76
SEMA3F-202ENST00000413852 IGKV2-28A0A075B6P5 120 aa10.33□□□□□ -0.76
SEMA3F-202ENST00000413852 TRBV7-7A0A0K0K1E9 115 aa10.33□□□□□ -0.76
SEMA3F-202ENST00000413852 IGKV2D-28P01615 120 aa10.33□□□□□ -0.76
SEMA3F-202ENST00000413852 FAM240AA0A1B0GVK7 77 aa10.33□□□□□ -0.76
SEMA3F-202ENST00000413852 C14orf132Q9NPU4 83 aa10.33□□□□□ -0.76
SEMA3F-202ENST00000413852 IGLV4-60A0A075B6I1 120 aa10.32□□□□□ -0.76
SEMA3F-202ENST00000413852 K7EQD1 137 aa10.32□□□□□ -0.76
SEMA3F-202ENST00000413852 RPL35AP18077 110 aaKnown RBP10.32□□□□□ -0.76
SEMA3F-202ENST00000413852 RPL36AP83881 106 aaKnown RBP10.32□□□□□ -0.76
SEMA3F-202ENST00000413852 SDIM1Q6ZPB5 146 aa10.32□□□□□ -0.76
SEMA3F-202ENST00000413852 RPL36ALQ969Q0 106 aaKnown RBP10.32□□□□□ -0.76
SEMA3F-202ENST00000413852 DNAJC30Q96LL9 226 aa10.32□□□□□ -0.76
SEMA3F-202ENST00000413852 A0A096LNT2 108 aa10.32□□□□□ -0.76
SEMA3F-202ENST00000413852 IGKV3D-7A0A0C4DH55 119 aa10.32□□□□□ -0.76
SEMA3F-202ENST00000413852 LINC00158P58513 81 aa10.32□□□□□ -0.76
SEMA3F-202ENST00000413852 C5orf38Q86SI9 138 aa10.32□□□□□ -0.76
SEMA3F-202ENST00000413852 CR1P17927 2039 aa10.32□□□□□ -0.76
SEMA3F-202ENST00000413852 A8MTW9 85 aa10.31□□□□□ -0.76
SEMA3F-202ENST00000413852 PPDPFQ9H3Y8 114 aa10.31□□□□□ -0.76
SEMA3F-202ENST00000413852 ITPR3Q14573 2671 aa10.3□□□□□ -0.76
SEMA3F-202ENST00000413852 UBE2L6O14933 153 aa10.3□□□□□ -0.76
SEMA3F-202ENST00000413852 SMIM11BQ8TCY0 68 aa10.3□□□□□ -0.76
SEMA3F-202ENST00000413852 SND1-IT1Q9HBX3 110 aa10.3□□□□□ -0.76
SEMA3F-202ENST00000413852 LOC107984640A0A0U1RRK4 108 aa10.29□□□□□ -0.76
SEMA3F-202ENST00000413852 CLPSL2Q6UWE3 100 aa10.29□□□□□ -0.76
SEMA3F-202ENST00000413852 A0A087WVE0 104 aa10.29□□□□□ -0.76
SEMA3F-202ENST00000413852 CYSTM1Q9H1C7 97 aa10.29□□□□□ -0.76
SEMA3F-202ENST00000413852 PEMTQ9UBM1 199 aa10.29□□□□□ -0.76
SEMA3F-202ENST00000413852 TRGV2A0A075B6R0 118 aa10.29□□□□□ -0.76
SEMA3F-202ENST00000413852 NCR3O14931 201 aa10.29□□□□□ -0.76
SEMA3F-202ENST00000413852 PRR3P79522 188 aaKnown RBP10.29□□□□□ -0.76
SEMA3F-202ENST00000413852 C9orf153Q5TBE3 101 aa10.29□□□□□ -0.76
SEMA3F-202ENST00000413852 FLNAP21333 2647 aaKnown RBP10.28□□□□□ -0.76
SEMA3F-202ENST00000413852 IGHV4-31P0DP07 118 aa10.28□□□□□ -0.76
SEMA3F-202ENST00000413852 MALP21145 153 aa10.28□□□□□ -0.76
SEMA3F-202ENST00000413852 OR13C6PQ8NH95 151 aa10.28□□□□□ -0.76
SEMA3F-202ENST00000413852 CRPP02741 224 aa10.28□□□□□ -0.76
SEMA3F-202ENST00000413852 MRPL23Q16540 153 aaKnown RBP10.28□□□□□ -0.76
SEMA3F-202ENST00000413852 HIST2H2BCQ6DN03 193 aa10.27□□□□□ -0.77
SEMA3F-202ENST00000413852 COX7B2Q8TF08 81 aa10.27□□□□□ -0.77
SEMA3F-202ENST00000413852 A0A096LPF7 62 aa10.27□□□□□ -0.77
SEMA3F-202ENST00000413852 CCL18P55774 89 aa10.27□□□□□ -0.77
SEMA3F-202ENST00000413852 TMEM243Q9BU79 118 aa10.27□□□□□ -0.77
SEMA3F-202ENST00000413852 LECT2O14960 151 aa10.26□□□□□ -0.77
SEMA3F-202ENST00000413852 LINC00643Q86TS7 51 aa10.26□□□□□ -0.77
SEMA3F-202ENST00000413852 TRACP01848 142 aa10.26□□□□□ -0.77
SEMA3F-202ENST00000413852 FAM110AQ9BQ89 295 aa10.26□□□□□ -0.77
SEMA3F-202ENST00000413852 C4orf3Q8WVX3 66 aa10.25□□□□□ -0.77
SEMA3F-202ENST00000413852 PAX4O43316 350 aa10.25□□□□□ -0.77
SEMA3F-202ENST00000413852 GIG44P09565 113 aaPredicted RBP10.25□□□□□ -0.77
SEMA3F-202ENST00000413852 WFDC9Q8NEX5 89 aa10.23□□□□□ -0.77
SEMA3F-202ENST00000413852 IL17DQ8TAD2 202 aa10.23□□□□□ -0.77
SEMA3F-202ENST00000413852 LINC00846Q9NV44 126 aa10.23□□□□□ -0.77
SEMA3F-202ENST00000413852 VWFP04275 2813 aa10.23□□□□□ -0.77
SEMA3F-202ENST00000413852 TRGV4A0A0C4DH28 118 aa10.22□□□□□ -0.77
SEMA3F-202ENST00000413852 DNAL4O96015 105 aa10.22□□□□□ -0.77
SEMA3F-202ENST00000413852 C3orf22Q8N5N4 141 aa10.22□□□□□ -0.77
SEMA3F-202ENST00000413852 PLAC8L1A1L4L8 177 aa10.22□□□□□ -0.77
SEMA3F-202ENST00000413852 ACYP1P07311 99 aa10.22□□□□□ -0.77
SEMA3F-202ENST00000413852 RPL28P46779 137 aaKnown RBP10.22□□□□□ -0.77
SEMA3F-202ENST00000413852 XCL1P47992 114 aa10.22□□□□□ -0.77
SEMA3F-202ENST00000413852 hADV29S1A0JD25 119 aa10.21□□□□□ -0.77
SEMA3F-202ENST00000413852 FSHBP01225 129 aa10.21□□□□□ -0.77
SEMA3F-202ENST00000413852 DEFB130BP0DP73 79 aa10.21□□□□□ -0.77
SEMA3F-202ENST00000413852 DEFB130AP0DP74 79 aa10.21□□□□□ -0.77
SEMA3F-202ENST00000413852 RNASE1P07998 156 aaKnown RBP10.21□□□□□ -0.78
SEMA3F-202ENST00000413852 TRAV13-2A0A0B4J235 113 aa10.2□□□□□ -0.78
SEMA3F-202ENST00000413852 CSDC2Q9Y534 153 aaKnown RBP10.2□□□□□ -0.78
SEMA3F-202ENST00000413852 Q8N3U1 123 aa10.2□□□□□ -0.78
SEMA3F-202ENST00000413852 CCL24O00175 119 aa10.19□□□□□ -0.78
SEMA3F-202ENST00000413852 J3QLI3 93 aa10.19□□□□□ -0.78
SEMA3F-202ENST00000413852 FAM19A3Q7Z5A8 133 aa10.19□□□□□ -0.78
SEMA3F-202ENST00000413852 LRRC75A-AS1Q8N1F1 130 aa10.19□□□□□ -0.78
SEMA3F-202ENST00000413852 TRBV10-1A0A0K0K1A3 114 aa10.18□□□□□ -0.78
SEMA3F-202ENST00000413852 DSCR9P59020 149 aa10.18□□□□□ -0.78
SEMA3F-202ENST00000413852 CFAP161Q6P656 301 aa10.18□□□□□ -0.78
SEMA3F-202ENST00000413852 IGHV3OR16-9A0A0B4J2B5 98 aa10.18□□□□□ -0.78
SEMA3F-202ENST00000413852 HILS1P60008 231 aa10.18□□□□□ -0.78
SEMA3F-202ENST00000413852 C2orf48Q96LS8 159 aa10.18□□□□□ -0.78
SEMA3F-202ENST00000413852 ESM1Q9NQ30 184 aa10.18□□□□□ -0.78
SEMA3F-202ENST00000413852 USP24Q9UPU5 2620 aa10.18□□□□□ -0.78
SEMA3F-202ENST00000413852 CXCL5P42830 114 aa10.17□□□□□ -0.78
SEMA3F-202ENST00000413852 C9orf116Q5BN46 136 aaPredicted RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms