RNA–Protein interactions for RNA: ENST00000409808.6

LIMS2-207, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene LIMS2, Length 2,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-207ENST00000409808 IL17DQ8TAD2 202 aa14.13□□□□□ -0.15
LIMS2-207ENST00000409808 TMEM101Q96IK0 257 aa14.13□□□□□ -0.15
LIMS2-207ENST00000409808 CMC4P56277 68 aaPredicted RBP14.12□□□□□ -0.15
LIMS2-207ENST00000409808 PRIMA1Q86XR5 153 aa14.12□□□□□ -0.15
LIMS2-207ENST00000409808 COPS9Q8WXC6 57 aa14.12□□□□□ -0.15
LIMS2-207ENST00000409808 STAB1Q9NY15 2570 aa14.11□□□□□ -0.15
LIMS2-207ENST00000409808 C1orf158Q8N1D5 194 aa14.11□□□□□ -0.15
LIMS2-207ENST00000409808 NTN5Q8WTR8 489 aaPredicted RBP14.11□□□□□ -0.15
LIMS2-207ENST00000409808 IGLV5-39A0A0G2JS06 123 aa14.1□□□□□ -0.15
LIMS2-207ENST00000409808 A8MZ25 164 aa14.1□□□□□ -0.15
LIMS2-207ENST00000409808 H3BT86 120 aa14.1□□□□□ -0.15
LIMS2-207ENST00000409808 GIG44P09565 113 aaPredicted RBP14.1□□□□□ -0.15
LIMS2-207ENST00000409808 RPL36AP83881 106 aaKnown RBP14.1□□□□□ -0.15
LIMS2-207ENST00000409808 DAZ2Q13117 558 aaKnown RBP14.1□□□□□ -0.15
LIMS2-207ENST00000409808 C9orf66Q5T8R8 295 aa14.1□□□□□ -0.15
LIMS2-207ENST00000409808 DAZ4Q86SG3 579 aaKnown RBP14.1□□□□□ -0.15
LIMS2-207ENST00000409808 RPL36ALQ969Q0 106 aaKnown RBP14.1□□□□□ -0.15
LIMS2-207ENST00000409808 DAZ3Q9NR90 486 aaKnown RBP14.1□□□□□ -0.15
LIMS2-207ENST00000409808 FAM110AQ9BQ89 295 aa14.09□□□□□ -0.15
LIMS2-207ENST00000409808 NACAE9PAV3 2078 aa14.09□□□□□ -0.15
LIMS2-207ENST00000409808 LINC00242Q5T6M2 205 aa14.08□□□□□ -0.16
LIMS2-207ENST00000409808 TRGV1A0A0A0MS02 117 aa14.07□□□□□ -0.16
LIMS2-207ENST00000409808 C2orf82Q6UX34 121 aa14.07□□□□□ -0.16
LIMS2-207ENST00000409808 K7EQD1 137 aa14.07□□□□□ -0.16
LIMS2-207ENST00000409808 TRAV4A0A0B4J268 109 aa14.06□□□□□ -0.16
LIMS2-207ENST00000409808 LST1O00453 97 aa14.06□□□□□ -0.16
LIMS2-207ENST00000409808 COX6A2Q02221 97 aa14.06□□□□□ -0.16
LIMS2-207ENST00000409808 UBE2WQ96B02 151 aa14.06□□□□□ -0.16
LIMS2-207ENST00000409808 H7C423 109 aa14.06□□□□□ -0.16
LIMS2-207ENST00000409808 PPDPFQ9H3Y8 114 aa14.05□□□□□ -0.16
LIMS2-207ENST00000409808 TRAV8-4A0A0B4J246 113 aa14.04□□□□□ -0.16
LIMS2-207ENST00000409808 NPC2P61916 151 aa14.04□□□□□ -0.16
LIMS2-207ENST00000409808 LINC00308Q8TCZ7 52 aa14.04□□□□□ -0.16
LIMS2-207ENST00000409808 Q9H8V8 135 aa14.04□□□□□ -0.16
LIMS2-207ENST00000409808 HERV-K104P63124 156 aa14.02□□□□□ -0.16
LIMS2-207ENST00000409808 WFDC9Q8NEX5 89 aa14.02□□□□□ -0.16
LIMS2-207ENST00000409808 TEX49A0A1B0GTD5 131 aa14.02□□□□□ -0.17
LIMS2-207ENST00000409808 SMIM1B2RUZ4 78 aa14.02□□□□□ -0.17
LIMS2-207ENST00000409808 C3orf56Q8N813 242 aa14.02□□□□□ -0.17
LIMS2-207ENST00000409808 LINC00694P0DN24 101 aa14.01□□□□□ -0.17
LIMS2-207ENST00000409808 CDC42SE2Q9NRR3 84 aa14.01□□□□□ -0.17
LIMS2-207ENST00000409808 PKD1L1Q8TDX9 2849 aa14.01□□□□□ -0.17
LIMS2-207ENST00000409808 SNCGO76070 127 aa14.01□□□□□ -0.17
LIMS2-207ENST00000409808 DEFB121Q5J5C9 76 aa14.01□□□□□ -0.17
LIMS2-207ENST00000409808 NTM-AS1Q6ZSK4 140 aa14.01□□□□□ -0.17
LIMS2-207ENST00000409808 CSNK1G2-AS1Q8NCQ2 148 aa14.01□□□□□ -0.17
LIMS2-207ENST00000409808 COL6A5A8TX70 2615 aa14.01□□□□□ -0.17
LIMS2-207ENST00000409808 NBEAL2Q6ZNJ1 2754 aa14□□□□□ -0.17
LIMS2-207ENST00000409808 MRPL23Q16540 153 aaKnown RBP13.99□□□□□ -0.17
LIMS2-207ENST00000409808 Q6ZTI0 123 aa13.99□□□□□ -0.17
LIMS2-207ENST00000409808 CLEC2BQ92478 149 aa13.99□□□□□ -0.17
LIMS2-207ENST00000409808 DAND5Q8N907 189 aa13.99□□□□□ -0.17
LIMS2-207ENST00000409808 TRAV26-1A0A087WT03 109 aa13.98□□□□□ -0.17
LIMS2-207ENST00000409808 Q6Q795 121 aa13.98□□□□□ -0.17
LIMS2-207ENST00000409808 ZNF625Q96I27 306 aaPredicted RBP13.98□□□□□ -0.17
LIMS2-207ENST00000409808 TRAV13-1A0A0B4J241 112 aa13.97□□□□□ -0.17
LIMS2-207ENST00000409808 FAM240AA0A1B0GVK7 77 aa13.97□□□□□ -0.17
LIMS2-207ENST00000409808 GAGE2BQ13066 116 aa13.97□□□□□ -0.17
LIMS2-207ENST00000409808 GAGE2EQ4V326 116 aa13.97□□□□□ -0.17
LIMS2-207ENST00000409808 GAGE2DQ9UEU5 116 aa13.97□□□□□ -0.17
LIMS2-207ENST00000409808 F5H768 121 aa13.97□□□□□ -0.17
LIMS2-207ENST00000409808 TMEM243Q9BU79 118 aa13.97□□□□□ -0.17
LIMS2-207ENST00000409808 CMYA5Q8N3K9 4069 aa13.97□□□□□ -0.17
LIMS2-207ENST00000409808 GAGE12JA6NER3 117 aa13.96□□□□□ -0.17
LIMS2-207ENST00000409808 UBE2L6O14933 153 aa13.96□□□□□ -0.17
LIMS2-207ENST00000409808 GAGE4Q13068 117 aa13.96□□□□□ -0.17
LIMS2-207ENST00000409808 GAGE5Q13069 117 aa13.96□□□□□ -0.17
LIMS2-207ENST00000409808 C16orf74Q96GX8 76 aa13.96□□□□□ -0.17
LIMS2-207ENST00000409808 COX7A2LO14548 114 aa13.96□□□□□ -0.18
LIMS2-207ENST00000409808 OXLD1Q5BKU9 147 aa13.96□□□□□ -0.18
LIMS2-207ENST00000409808 MEIG1Q5JSS6 88 aa13.95□□□□□ -0.18
LIMS2-207ENST00000409808 SHISA2Q6UWI4 295 aa13.95□□□□□ -0.18
LIMS2-207ENST00000409808 ANAPC13Q9BS18 74 aa13.95□□□□□ -0.18
LIMS2-207ENST00000409808 TRBV6-4A0A1B0GX49 114 aa13.94□□□□□ -0.18
LIMS2-207ENST00000409808 NOP10Q9NPE3 64 aaKnown RBP13.94□□□□□ -0.18
LIMS2-207ENST00000409808 PLAC8L1A1L4L8 177 aa13.92□□□□□ -0.18
LIMS2-207ENST00000409808 OVOL2Q9BRP0 275 aa13.92□□□□□ -0.18
LIMS2-207ENST00000409808 SOSTDC1Q6X4U4 206 aa13.92□□□□□ -0.18
LIMS2-207ENST00000409808 C15orf53Q8NAA6 179 aa13.91□□□□□ -0.18
LIMS2-207ENST00000409808 WIPF1O43516 503 aa13.91□□□□□ -0.18
LIMS2-207ENST00000409808 TRGV2A0A075B6R0 118 aa13.9□□□□□ -0.18
LIMS2-207ENST00000409808 TRACP01848 142 aa13.9□□□□□ -0.18
LIMS2-207ENST00000409808 ACYP1P07311 99 aa13.89□□□□□ -0.19
LIMS2-207ENST00000409808 A0A0U1RRA0 63 aa13.89□□□□□ -0.19
LIMS2-207ENST00000409808 KRTAP10-11P60412 298 aa13.88□□□□□ -0.19
LIMS2-207ENST00000409808 TTC32Q5I0X7 151 aa13.88□□□□□ -0.19
LIMS2-207ENST00000409808 FAM222AQ5U5X8 452 aa13.87□□□□□ -0.19
LIMS2-207ENST00000409808 TRAV13-2A0A0B4J235 113 aa13.87□□□□□ -0.19
LIMS2-207ENST00000409808 GAGE7O76087 117 aa13.87□□□□□ -0.19
LIMS2-207ENST00000409808 GAGE12FP0CL80 117 aa13.87□□□□□ -0.19
LIMS2-207ENST00000409808 GAGE12GP0CL81 117 aa13.87□□□□□ -0.19
LIMS2-207ENST00000409808 GAGE12IP0CL82 117 aa13.87□□□□□ -0.19
LIMS2-207ENST00000409808 NDUFV3P56181 108 aaKnown RBP13.86□□□□□ -0.19
LIMS2-207ENST00000409808 DEFB135Q30KP9 77 aa13.86□□□□□ -0.19
LIMS2-207ENST00000409808 COX7B2Q8TF08 81 aa13.86□□□□□ -0.19
LIMS2-207ENST00000409808 TRGV4A0A0C4DH28 118 aa13.85□□□□□ -0.19
LIMS2-207ENST00000409808 IGHV4-30-4P0DP06 118 aa13.85□□□□□ -0.19
LIMS2-207ENST00000409808 X6R8D5 127 aa13.85□□□□□ -0.19
LIMS2-207ENST00000409808 RPL28P46779 137 aaKnown RBP13.82□□□□□ -0.2
LIMS2-207ENST00000409808 TRBV6-8A0A0A6YYG3 113 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 136.2 ms