RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 SIVA1O15304 175 aa8.11□□□□□ -1.11
SNX13-202ENST00000409604 POM121L12Q8N7R1 296 aa8.11□□□□□ -1.11
SNX13-202ENST00000409604 NKAPP1Q8N9T2 125 aa8.11□□□□□ -1.11
SNX13-202ENST00000409604 A0A1B0GWB2 263 aa8.11□□□□□ -1.11
SNX13-202ENST00000409604 POLR2KP53803 58 aaKnown RBP8.11□□□□□ -1.11
SNX13-202ENST00000409604 COX8AP10176 69 aa8.11□□□□□ -1.11
SNX13-202ENST00000409604 UBE2BP63146 152 aa8.11□□□□□ -1.11
SNX13-202ENST00000409604 LINC01545Q5VT33 79 aa8.11□□□□□ -1.11
SNX13-202ENST00000409604 Q8N3U1 123 aa8.11□□□□□ -1.11
SNX13-202ENST00000409604 COPS9Q8WXC6 57 aa8.11□□□□□ -1.11
SNX13-202ENST00000409604 OVOL2Q9BRP0 275 aa8.11□□□□□ -1.11
SNX13-202ENST00000409604 WFDC10BQ8IUB3 73 aa8.1□□□□□ -1.11
SNX13-202ENST00000409604 RMI2Q96E14 147 aa8.1□□□□□ -1.11
SNX13-202ENST00000409604 TRBV27A0A0K0K1C4 114 aa8.1□□□□□ -1.11
SNX13-202ENST00000409604 URB1-AS1Q96HZ7 61 aa8.1□□□□□ -1.11
SNX13-202ENST00000409604 IGKV2D-26A0A0A0MRZ7 120 aa8.1□□□□□ -1.11
SNX13-202ENST00000409604 TENM1Q9UKZ4 2725 aa8.1□□□□□ -1.11
SNX13-202ENST00000409604 LINC00310P59036 64 aa8.1□□□□□ -1.11
SNX13-202ENST00000409604 SH2D6Q7Z4S9 175 aa8.1□□□□□ -1.11
SNX13-202ENST00000409604 TIMM17AQ99595 171 aa8.1□□□□□ -1.11
SNX13-202ENST00000409604 SAMD5Q5TGI4 173 aa8.09□□□□□ -1.11
SNX13-202ENST00000409604 C11orf72Q8NBR9 251 aa8.09□□□□□ -1.11
SNX13-202ENST00000409604 COX7B2Q8TF08 81 aa8.09□□□□□ -1.11
SNX13-202ENST00000409604 C12orf74Q32Q52 190 aa8.09□□□□□ -1.12
SNX13-202ENST00000409604 SNHG12Q9BXW3 62 aa8.09□□□□□ -1.12
SNX13-202ENST00000409604 SPATA12Q7Z6I5 190 aa8.08□□□□□ -1.12
SNX13-202ENST00000409604 U3KQK5 164 aa8.08□□□□□ -1.12
SNX13-202ENST00000409604 X6R8D5 127 aa8.08□□□□□ -1.12
SNX13-202ENST00000409604 UBE2D3P61077 147 aa8.08□□□□□ -1.12
SNX13-202ENST00000409604 UBE2D2P62837 147 aa8.08□□□□□ -1.12
SNX13-202ENST00000409604 WFDC9Q8NEX5 89 aa8.08□□□□□ -1.12
SNX13-202ENST00000409604 MIR7-3HGQ8N6C7 128 aa8.08□□□□□ -1.12
SNX13-202ENST00000409604 K7EIL1 84 aa8.07□□□□□ -1.12
SNX13-202ENST00000409604 SLC25A20O43772 301 aa8.07□□□□□ -1.12
SNX13-202ENST00000409604 J3QR89 54 aa8.07□□□□□ -1.12
SNX13-202ENST00000409604 MUSTN1Q8IVN3 82 aa8.07□□□□□ -1.12
SNX13-202ENST00000409604 CNFNQ9BYD5 112 aa8.07□□□□□ -1.12
SNX13-202ENST00000409604 PDZD2O15018 2839 aa8.07□□□□□ -1.12
SNX13-202ENST00000409604 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.06□□□□□ -1.12
SNX13-202ENST00000409604 NCR3O14931 201 aa8.06□□□□□ -1.12
SNX13-202ENST00000409604 DEFB105AQ8NG35 78 aa8.06□□□□□ -1.12
SNX13-202ENST00000409604 SCRT2Q9NQ03 307 aa8.06□□□□□ -1.12
SNX13-202ENST00000409604 A4D1N5 150 aa8.05□□□□□ -1.12
SNX13-202ENST00000409604 ZNF22P17026 224 aaPredicted RBP8.05□□□□□ -1.12
SNX13-202ENST00000409604 MRPS16Q9Y3D3 137 aaKnown RBP8.05□□□□□ -1.12
SNX13-202ENST00000409604 PKD1L1Q8TDX9 2849 aa8.05□□□□□ -1.12
SNX13-202ENST00000409604 PIK3CD-AS1Q5SR53 167 aa8.05□□□□□ -1.12
SNX13-202ENST00000409604 MAPKAPK5-AS1Q8N8E1 139 aa8.05□□□□□ -1.12
SNX13-202ENST00000409604 FXYD2P54710 66 aa8.04□□□□□ -1.12
SNX13-202ENST00000409604 BVES-AS1Q5T3Y7 98 aa8.04□□□□□ -1.12
SNX13-202ENST00000409604 UBE2D4Q9Y2X8 147 aa8.04□□□□□ -1.12
SNX13-202ENST00000409604 C9orf116Q5BN46 136 aaPredicted RBP8.04□□□□□ -1.12
SNX13-202ENST00000409604 SND1-IT1Q9HBX3 110 aa8.04□□□□□ -1.12
SNX13-202ENST00000409604 NDUFA1O15239 70 aa8.04□□□□□ -1.12
SNX13-202ENST00000409604 LAMTOR3Q9UHA4 124 aa8.03□□□□□ -1.12
SNX13-202ENST00000409604 LELP1Q5T871 98 aa8.03□□□□□ -1.12
SNX13-202ENST00000409604 TRBV6-5A0A0K0K1A5 114 aa8.03□□□□□ -1.12
SNX13-202ENST00000409604 LRCOL1A6NCL2 159 aa8.03□□□□□ -1.12
SNX13-202ENST00000409604 IGHV1-58A0A0C4DH39 117 aa8.02□□□□□ -1.12
SNX13-202ENST00000409604 LINC00959A0A1B0GUT2 108 aa8.02□□□□□ -1.12
SNX13-202ENST00000409604 IL17DQ8TAD2 202 aa8.02□□□□□ -1.12
SNX13-202ENST00000409604 NFE4Q86UQ8 179 aa8.02□□□□□ -1.13
SNX13-202ENST00000409604 KIF25-AS1Q9Y6Z4 181 aa8.02□□□□□ -1.13
SNX13-202ENST00000409604 C9JAW5 83 aa8.01□□□□□ -1.13
SNX13-202ENST00000409604 GIG44P09565 113 aaPredicted RBP8.01□□□□□ -1.13
SNX13-202ENST00000409604 C19orf73Q9NVV2 129 aa8.01□□□□□ -1.13
SNX13-202ENST00000409604 COX6A2Q02221 97 aa8.01□□□□□ -1.13
SNX13-202ENST00000409604 FAM19A4Q96LR4 140 aa8.01□□□□□ -1.13
SNX13-202ENST00000409604 CDC42SE2Q9NRR3 84 aa8.01□□□□□ -1.13
SNX13-202ENST00000409604 E9PLD3 99 aa8.01□□□□□ -1.13
SNX13-202ENST00000409604 LINC00315P59091 139 aa8.01□□□□□ -1.13
SNX13-202ENST00000409604 LYPD5Q6UWN5 251 aa8.01□□□□□ -1.13
SNX13-202ENST00000409604 COX8CQ7Z4L0 72 aa8.01□□□□□ -1.13
SNX13-202ENST00000409604 TM2D2Q9BX73 214 aa8.01□□□□□ -1.13
SNX13-202ENST00000409604 TRAV12-1A0A0B4J245 112 aa8□□□□□ -1.13
SNX13-202ENST00000409604 ESRGQ1W209 222 aa8□□□□□ -1.13
SNX13-202ENST00000409604 CEND1Q8N111 149 aa8□□□□□ -1.13
SNX13-202ENST00000409604 CHCHD7Q9BUK0 85 aa8□□□□□ -1.13
SNX13-202ENST00000409604 A0A096LNI7 61 aa8□□□□□ -1.13
SNX13-202ENST00000409604 A0A096LNJ9 63 aa8□□□□□ -1.13
SNX13-202ENST00000409604 NTM-AS1Q6ZSK4 140 aa8□□□□□ -1.13
SNX13-202ENST00000409604 Q8NAQ8 132 aa8□□□□□ -1.13
SNX13-202ENST00000409604 BSNQ9UPA5 3926 aa8□□□□□ -1.13
SNX13-202ENST00000409604 TIRAPP58753 221 aa7.99□□□□□ -1.13
SNX13-202ENST00000409604 PRO1854Q9UHT4 67 aa7.99□□□□□ -1.13
SNX13-202ENST00000409604 VWFP04275 2813 aa7.99□□□□□ -1.13
SNX13-202ENST00000409604 H3BMG7 143 aa7.99□□□□□ -1.13
SNX13-202ENST00000409604 FOXI1Q12951 378 aa7.99□□□□□ -1.13
SNX13-202ENST00000409604 LBHQ53QV2 105 aaPredicted RBP7.99□□□□□ -1.13
SNX13-202ENST00000409604 LINC00242Q5T6M2 205 aa7.99□□□□□ -1.13
SNX13-202ENST00000409604 FAM19A5Q7Z5A7 132 aaPredicted RBP7.99□□□□□ -1.13
SNX13-202ENST00000409604 UNQ6190/PRO20217Q6UXQ8 127 aa7.98□□□□□ -1.13
SNX13-202ENST00000409604 C6orf223Q8N319 242 aa7.98□□□□□ -1.13
SNX13-202ENST00000409604 C15orf53Q8NAA6 179 aa7.98□□□□□ -1.13
SNX13-202ENST00000409604 IGIPA6NJ69 53 aa7.98□□□□□ -1.13
SNX13-202ENST00000409604 LINC01620Q4KN68 170 aa7.98□□□□□ -1.13
SNX13-202ENST00000409604 C10orf126Q8N4M7 172 aa7.97□□□□□ -1.13
SNX13-202ENST00000409604 A0A0J9YXY3 114 aa7.97□□□□□ -1.13
SNX13-202ENST00000409604 TINCRA0A1B0GVN0 87 aa7.97□□□□□ -1.13
SNX13-202ENST00000409604 TSPAN13O95857 204 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 181.9 ms