RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 SLPIP03973 132 aa3.56□□□□□ -1.84
SCN3A-203ENST00000409101 FXYD2P54710 66 aa3.56□□□□□ -1.84
SCN3A-203ENST00000409101 COX6A2Q02221 97 aa3.56□□□□□ -1.84
SCN3A-203ENST00000409101 UNQ6190/PRO20217Q6UXQ8 127 aa3.56□□□□□ -1.84
SCN3A-203ENST00000409101 A8MZ25 164 aa3.56□□□□□ -1.84
SCN3A-203ENST00000409101 PLA2G1BP04054 148 aaKnown RBP3.56□□□□□ -1.84
SCN3A-203ENST00000409101 POLR2KP53803 58 aaKnown RBP3.56□□□□□ -1.84
SCN3A-203ENST00000409101 TIMM17BO60830 172 aa3.56□□□□□ -1.84
SCN3A-203ENST00000409101 IGLV4-60A0A075B6I1 120 aa3.55□□□□□ -1.84
SCN3A-203ENST00000409101 FAM236DA0A1B0GTK5 79 aa3.55□□□□□ -1.84
SCN3A-203ENST00000409101 FAM236CP0DP71 79 aa3.55□□□□□ -1.84
SCN3A-203ENST00000409101 NBDYA0A0U1RRE5 68 aa3.55□□□□□ -1.84
SCN3A-203ENST00000409101 H3BT86 120 aa3.55□□□□□ -1.84
SCN3A-203ENST00000409101 COA6Q5JTJ3 125 aaKnown RBP3.55□□□□□ -1.84
SCN3A-203ENST00000409101 MRPL55Q7Z7F7 128 aaKnown RBP3.55□□□□□ -1.84
SCN3A-203ENST00000409101 PCP4P48539 62 aa3.55□□□□□ -1.84
SCN3A-203ENST00000409101 LIMD2Q9BT23 127 aa3.55□□□□□ -1.84
SCN3A-203ENST00000409101 DOCK11Q5JSL3 2073 aa3.54□□□□□ -1.84
SCN3A-203ENST00000409101 RTL8CO15255 209 aa3.54□□□□□ -1.84
SCN3A-203ENST00000409101 ESRGQ1W209 222 aa3.54□□□□□ -1.84
SCN3A-203ENST00000409101 SMIM20Q8N5G0 67 aa3.54□□□□□ -1.84
SCN3A-203ENST00000409101 CEP350Q5VT06 3117 aa3.54□□□□□ -1.84
SCN3A-203ENST00000409101 A0A1B0GUV1 79 aa3.54□□□□□ -1.84
SCN3A-203ENST00000409101 H3BNG1 76 aa3.54□□□□□ -1.84
SCN3A-203ENST00000409101 CCKP06307 115 aa3.54□□□□□ -1.84
SCN3A-203ENST00000409101 CPAMD8Q8IZJ3 1885 aa3.54□□□□□ -1.84
SCN3A-203ENST00000409101 NDUFC2-KCTD14E9PQ53 114 aa3.54□□□□□ -1.84
SCN3A-203ENST00000409101 NCOA6Q14686 2063 aaPredicted RBP3.54□□□□□ -1.84
SCN3A-203ENST00000409101 C9orf116Q5BN46 136 aaPredicted RBP3.54□□□□□ -1.84
SCN3A-203ENST00000409101 EML5Q05BV3 1969 aa3.54□□□□□ -1.84
SCN3A-203ENST00000409101 Q6ZSN1 163 aa3.54□□□□□ -1.84
SCN3A-203ENST00000409101 PRYO14603 147 aa3.53□□□□□ -1.84
SCN3A-203ENST00000409101 CDPF1Q6NVV7 123 aa3.53□□□□□ -1.84
SCN3A-203ENST00000409101 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.53□□□□□ -1.84
SCN3A-203ENST00000409101 BDP1A6H8Y1 2624 aa3.53□□□□□ -1.84
SCN3A-203ENST00000409101 LINC00694P0DN24 101 aa3.53□□□□□ -1.84
SCN3A-203ENST00000409101 LINC00242Q5T6M2 205 aa3.53□□□□□ -1.84
SCN3A-203ENST00000409101 Q6ZQY7 126 aa3.53□□□□□ -1.84
SCN3A-203ENST00000409101 TEX49A0A1B0GTD5 131 aa3.53□□□□□ -1.84
SCN3A-203ENST00000409101 LST1O00453 97 aa3.53□□□□□ -1.84
SCN3A-203ENST00000409101 LINC00315P59091 139 aa3.53□□□□□ -1.84
SCN3A-203ENST00000409101 TMEM258P61165 79 aa3.53□□□□□ -1.84
SCN3A-203ENST00000409101 CNFNQ9BYD5 112 aa3.53□□□□□ -1.85
SCN3A-203ENST00000409101 TET2Q6N021 2002 aaPredicted RBP3.52□□□□□ -1.85
SCN3A-203ENST00000409101 KRTAP10-11P60412 298 aa3.52□□□□□ -1.85
SCN3A-203ENST00000409101 C5orf47Q569G3 176 aa3.52□□□□□ -1.85
SCN3A-203ENST00000409101 LINC01561Q8N1V8 128 aa3.52□□□□□ -1.85
SCN3A-203ENST00000409101 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.52□□□□□ -1.85
SCN3A-203ENST00000409101 K7EIL1 84 aa3.52□□□□□ -1.85
SCN3A-203ENST00000409101 Q9BRP9 147 aa3.52□□□□□ -1.85
SCN3A-203ENST00000409101 X6R8D5 127 aa3.52□□□□□ -1.85
SCN3A-203ENST00000409101 Q6JHZ5 121 aa3.52□□□□□ -1.85
SCN3A-203ENST00000409101 SCXQ7RTU7 201 aa3.52□□□□□ -1.85
SCN3A-203ENST00000409101 CSDC2Q9Y534 153 aaKnown RBP3.52□□□□□ -1.85
SCN3A-203ENST00000409101 FREM1Q5H8C1 2179 aa3.52□□□□□ -1.85
SCN3A-203ENST00000409101 SPTAN1Q13813 2472 aaKnown RBP3.52□□□□□ -1.85
SCN3A-203ENST00000409101 ANKHD1Q8IWZ3 2542 aaKnown RBP3.52□□□□□ -1.85
SCN3A-203ENST00000409101 TRBV10-3A0A0K0K1G6 114 aa3.52□□□□□ -1.85
SCN3A-203ENST00000409101 SMIM11BQ8TCY0 68 aa3.52□□□□□ -1.85
SCN3A-203ENST00000409101 Q6ZRU5 148 aa3.52□□□□□ -1.85
SCN3A-203ENST00000409101 TEN1Q86WV5 123 aa3.52□□□□□ -1.85
SCN3A-203ENST00000409101 PTPRBP23467 1997 aa3.51□□□□□ -1.85
SCN3A-203ENST00000409101 C11orf72Q8NBR9 251 aa3.51□□□□□ -1.85
SCN3A-203ENST00000409101 SMIM1B2RUZ4 78 aa3.51□□□□□ -1.85
SCN3A-203ENST00000409101 ATOX1O00244 68 aa3.51□□□□□ -1.85
SCN3A-203ENST00000409101 GAS8-AS1O95177 125 aa3.51□□□□□ -1.85
SCN3A-203ENST00000409101 NCOR2Q9Y618 2525 aa3.51□□□□□ -1.85
SCN3A-203ENST00000409101 IGIPA6NJ69 53 aa3.51□□□□□ -1.85
SCN3A-203ENST00000409101 ATG2AQ2TAZ0 1938 aa3.51□□□□□ -1.85
SCN3A-203ENST00000409101 NDUFV3P56181 108 aaKnown RBP3.5□□□□□ -1.85
SCN3A-203ENST00000409101 LINC00588Q9Y4M8 146 aa3.5□□□□□ -1.85
SCN3A-203ENST00000409101 RPL37AP61513 92 aaKnown RBP3.5□□□□□ -1.85
SCN3A-203ENST00000409101 MAPKAPK5-AS1Q8N8E1 139 aa3.5□□□□□ -1.85
SCN3A-203ENST00000409101 TRIAP1O43715 76 aa3.5□□□□□ -1.85
SCN3A-203ENST00000409101 WFDC13Q8IUB5 93 aa3.5□□□□□ -1.85
SCN3A-203ENST00000409101 Q8NAQ8 132 aa3.5□□□□□ -1.85
SCN3A-203ENST00000409101 C22orf24Q9Y442 160 aa3.5□□□□□ -1.85
SCN3A-203ENST00000409101 CACNA1AO00555 2505 aa3.5□□□□□ -1.85
SCN3A-203ENST00000409101 IGHV6-1A0A0B4J1U7 121 aa3.49□□□□□ -1.85
SCN3A-203ENST00000409101 Q6ZVQ6 151 aa3.49□□□□□ -1.85
SCN3A-203ENST00000409101 TANC2Q9HCD6 1990 aa3.49□□□□□ -1.85
SCN3A-203ENST00000409101 ATP5EP2Q5VTU8 51 aa3.49□□□□□ -1.85
SCN3A-203ENST00000409101 Q6ZRP5 223 aa3.49□□□□□ -1.85
SCN3A-203ENST00000409101 COX8CQ7Z4L0 72 aa3.49□□□□□ -1.85
SCN3A-203ENST00000409101 SPTSSBQ8NFR3 76 aa3.49□□□□□ -1.85
SCN3A-203ENST00000409101 ACACBO00763 2458 aa3.49□□□□□ -1.85
SCN3A-203ENST00000409101 FAM19A3Q7Z5A8 133 aa3.49□□□□□ -1.85
SCN3A-203ENST00000409101 A0A096LNT2 108 aa3.48□□□□□ -1.85
SCN3A-203ENST00000409101 PRLHP81277 87 aa3.48□□□□□ -1.85
SCN3A-203ENST00000409101 RETNLBQ9BQ08 111 aa3.48□□□□□ -1.85
SCN3A-203ENST00000409101 PTPN13Q12923 2485 aa3.48□□□□□ -1.85
SCN3A-203ENST00000409101 KRTAP10-3P60369 221 aa3.48□□□□□ -1.85
SCN3A-203ENST00000409101 ENHOQ6UWT2 76 aa3.48□□□□□ -1.85
SCN3A-203ENST00000409101 AMELXQ99217 191 aa3.48□□□□□ -1.85
SCN3A-203ENST00000409101 FAM236AA0A1B0GUQ0 79 aa3.48□□□□□ -1.85
SCN3A-203ENST00000409101 FAM236BA0A1B0GV22 79 aa3.48□□□□□ -1.85
SCN3A-203ENST00000409101 LINC00336Q6ZUF6 198 aa3.48□□□□□ -1.85
SCN3A-203ENST00000409101 SMCR5Q8TEV8 140 aa3.48□□□□□ -1.85
SCN3A-203ENST00000409101 KIF25-AS1Q9Y6Z4 181 aa3.48□□□□□ -1.85
SCN3A-203ENST00000409101 DOPEY2Q9Y3R5 2298 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms