RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 PRO2289Q9P1D8 64 aa2.31□□□□□ -2.04
HMGB1P13-201ENST00000406019 C3P01024 1663 aa2.31□□□□□ -2.04
HMGB1P13-201ENST00000406019 NHSQ6T4R5 1651 aa2.31□□□□□ -2.04
HMGB1P13-201ENST00000406019 LY75O60449 1722 aa2.31□□□□□ -2.04
HMGB1P13-201ENST00000406019 MUC4Q99102 2169 aa2.3□□□□□ -2.04
HMGB1P13-201ENST00000406019 TRAV12-3A0A0B4J271 114 aa2.3□□□□□ -2.04
HMGB1P13-201ENST00000406019 ZNF815PA8K554 130 aa2.3□□□□□ -2.04
HMGB1P13-201ENST00000406019 H7C2G1 150 aa2.3□□□□□ -2.04
HMGB1P13-201ENST00000406019 ATXN8Q156A1 80 aa2.3□□□□□ -2.04
HMGB1P13-201ENST00000406019 NDUFA4L2Q9NRX3 87 aa2.3□□□□□ -2.04
HMGB1P13-201ENST00000406019 NRXN3Q9Y4C0 1643 aa2.3□□□□□ -2.04
HMGB1P13-201ENST00000406019 SCN7AQ01118 1682 aa2.3□□□□□ -2.04
HMGB1P13-201ENST00000406019 PAPPA2Q9BXP8 1791 aa2.3□□□□□ -2.04
HMGB1P13-201ENST00000406019 SIP14410 1827 aa2.3□□□□□ -2.04
HMGB1P13-201ENST00000406019 LAMA4Q16363 1823 aa2.3□□□□□ -2.04
HMGB1P13-201ENST00000406019 ANKRD36A6QL64 1941 aa2.3□□□□□ -2.04
HMGB1P13-201ENST00000406019 UBR3Q6ZT12 1888 aa2.29□□□□□ -2.04
HMGB1P13-201ENST00000406019 IGKV3D-7A0A0C4DH55 119 aa2.29□□□□□ -2.04
HMGB1P13-201ENST00000406019 TRBV7-4A0A0J9YYF1 115 aa2.29□□□□□ -2.04
HMGB1P13-201ENST00000406019 LOC101927531A0A1B0GV80 90 aa2.29□□□□□ -2.04
HMGB1P13-201ENST00000406019 MPDZO75970 2070 aa2.29□□□□□ -2.04
HMGB1P13-201ENST00000406019 COL4A2P08572 1712 aa2.28□□□□□ -2.04
HMGB1P13-201ENST00000406019 DOT1LQ8TEK3 1739 aa2.28□□□□□ -2.04
HMGB1P13-201ENST00000406019 SAMD9LQ8IVG5 1584 aa2.28□□□□□ -2.04
HMGB1P13-201ENST00000406019 A0A087WSZ3 146 aa2.28□□□□□ -2.04
HMGB1P13-201ENST00000406019 HMGN4O00479 90 aa2.28□□□□□ -2.04
HMGB1P13-201ENST00000406019 KRTAP5-8O75690 187 aa2.28□□□□□ -2.04
HMGB1P13-201ENST00000406019 ARMS2P0C7Q2 107 aa2.28□□□□□ -2.04
HMGB1P13-201ENST00000406019 LIMD2Q9BT23 127 aa2.28□□□□□ -2.04
HMGB1P13-201ENST00000406019 PRR15LQ9BU68 103 aa2.28□□□□□ -2.04
HMGB1P13-201ENST00000406019 ABRACLQ9P1F3 81 aa2.28□□□□□ -2.04
HMGB1P13-201ENST00000406019 TIMM9Q9Y5J7 89 aa2.28□□□□□ -2.04
HMGB1P13-201ENST00000406019 NINQ8N4C6 2090 aa2.28□□□□□ -2.04
HMGB1P13-201ENST00000406019 RICTORQ6R327 1708 aa2.28□□□□□ -2.05
HMGB1P13-201ENST00000406019 COL4A1P02462 1669 aa2.28□□□□□ -2.05
HMGB1P13-201ENST00000406019 NHSL1Q5SYE7 1610 aa2.28□□□□□ -2.05
HMGB1P13-201ENST00000406019 IGHV3-64A0A075B6Q5 118 aa2.27□□□□□ -2.05
HMGB1P13-201ENST00000406019 TRAV23DV6A0A075B6W5 121 aa2.27□□□□□ -2.05
HMGB1P13-201ENST00000406019 TRBV6-8A0A0A6YYG3 113 aa2.27□□□□□ -2.05
HMGB1P13-201ENST00000406019 IGHV1-18A0A0C4DH31 117 aa2.27□□□□□ -2.05
HMGB1P13-201ENST00000406019 ERC2-IT1O76042 136 aa2.27□□□□□ -2.05
HMGB1P13-201ENST00000406019 COX6CP09669 75 aa2.27□□□□□ -2.05
HMGB1P13-201ENST00000406019 ATP5EP2Q5VTU8 51 aa2.27□□□□□ -2.05
HMGB1P13-201ENST00000406019 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.27□□□□□ -2.05
HMGB1P13-201ENST00000406019 C14orf132Q9NPU4 83 aa2.27□□□□□ -2.05
HMGB1P13-201ENST00000406019 QSER1Q2KHR3 1735 aa2.27□□□□□ -2.05
HMGB1P13-201ENST00000406019 TIAM2Q8IVF5 1701 aa2.27□□□□□ -2.05
HMGB1P13-201ENST00000406019 DOCK11Q5JSL3 2073 aa2.26□□□□□ -2.05
HMGB1P13-201ENST00000406019 HIVEP2P31629 2446 aa2.26□□□□□ -2.05
HMGB1P13-201ENST00000406019 TRAV10A0A0B4J240 114 aa2.26□□□□□ -2.05
HMGB1P13-201ENST00000406019 IFI6P09912 130 aa2.26□□□□□ -2.05
HMGB1P13-201ENST00000406019 KRTAP26-1Q6PEX3 210 aa2.26□□□□□ -2.05
HMGB1P13-201ENST00000406019 C22orf24Q9Y442 160 aa2.26□□□□□ -2.05
HMGB1P13-201ENST00000406019 COL11A1P12107 1806 aaPredicted RBP2.26□□□□□ -2.05
HMGB1P13-201ENST00000406019 E9PCH4 1651 aa2.25□□□□□ -2.05
HMGB1P13-201ENST00000406019 IGHV3-33P01772 117 aa2.25□□□□□ -2.05
HMGB1P13-201ENST00000406019 FCER1GP30273 86 aa2.25□□□□□ -2.05
HMGB1P13-201ENST00000406019 SNRPGP62308 76 aaKnown RBP2.25□□□□□ -2.05
HMGB1P13-201ENST00000406019 ZFHX3Q15911 3703 aa2.25□□□□□ -2.05
HMGB1P13-201ENST00000406019 ICE1Q9Y2F5 2266 aa2.25□□□□□ -2.05
HMGB1P13-201ENST00000406019 CACNA1GO43497 2377 aa2.24□□□□□ -2.05
HMGB1P13-201ENST00000406019 A0A0G2JQZ4 141 aa2.24□□□□□ -2.05
HMGB1P13-201ENST00000406019 IL9P15248 144 aa2.24□□□□□ -2.05
HMGB1P13-201ENST00000406019 TPRXLQ17RH7 258 aa2.24□□□□□ -2.05
HMGB1P13-201ENST00000406019 C9orf163Q8N9P6 203 aa2.24□□□□□ -2.05
HMGB1P13-201ENST00000406019 TMEM254Q8TBM7 123 aa2.24□□□□□ -2.05
HMGB1P13-201ENST00000406019 V9GYV3 84 aa2.24□□□□□ -2.05
HMGB1P13-201ENST00000406019 DDX60LQ5H9U9 1706 aaKnown RBP2.24□□□□□ -2.05
HMGB1P13-201ENST00000406019 SHPRHQ149N8 1683 aa2.24□□□□□ -2.05
HMGB1P13-201ENST00000406019 DIDO1Q9BTC0 2240 aaKnown RBP2.23□□□□□ -2.05
HMGB1P13-201ENST00000406019 MYOFQ9NZM1 2061 aa2.23□□□□□ -2.05
HMGB1P13-201ENST00000406019 TRGV4A0A0C4DH28 118 aa2.23□□□□□ -2.05
HMGB1P13-201ENST00000406019 D6R8Y8 96 aa2.23□□□□□ -2.05
HMGB1P13-201ENST00000406019 ZNF833PQ6ZTB9 187 aa2.23□□□□□ -2.05
HMGB1P13-201ENST00000406019 Q6ZTI0 123 aa2.23□□□□□ -2.05
HMGB1P13-201ENST00000406019 MUSTN1Q8IVN3 82 aa2.23□□□□□ -2.05
HMGB1P13-201ENST00000406019 TTTY12Q9BZ98 90 aa2.23□□□□□ -2.05
HMGB1P13-201ENST00000406019 SCN3AQ9NY46 2000 aa2.23□□□□□ -2.05
HMGB1P13-201ENST00000406019 COL5A1P20908 1838 aaPredicted RBP2.23□□□□□ -2.05
HMGB1P13-201ENST00000406019 PCDH15Q96QU1 1955 aa2.22□□□□□ -2.05
HMGB1P13-201ENST00000406019 TRAV1-2A0A0B4J238 106 aa2.22□□□□□ -2.05
HMGB1P13-201ENST00000406019 A0A0J9YY99 117 aa2.22□□□□□ -2.05
HMGB1P13-201ENST00000406019 TRBV6-5A0A0K0K1A5 114 aa2.22□□□□□ -2.05
HMGB1P13-201ENST00000406019 TRBV30A0A0K0K1B3 111 aa2.22□□□□□ -2.05
HMGB1P13-201ENST00000406019 M0R3E3 92 aa2.22□□□□□ -2.05
HMGB1P13-201ENST00000406019 IGHV3-30P01768 117 aa2.22□□□□□ -2.05
HMGB1P13-201ENST00000406019 SAA2P0DJI9 122 aaPredicted RBP2.22□□□□□ -2.05
HMGB1P13-201ENST00000406019 IGHV3-30-5P0DP03 117 aa2.22□□□□□ -2.05
HMGB1P13-201ENST00000406019 KRTAP6-3Q3LI67 103 aa2.22□□□□□ -2.05
HMGB1P13-201ENST00000406019 PLAC8Q9NZF1 115 aa2.22□□□□□ -2.05
HMGB1P13-201ENST00000406019 LHFPL6Q9Y693 200 aa2.22□□□□□ -2.05
HMGB1P13-201ENST00000406019 CUL9Q8IWT3 2517 aa2.22□□□□□ -2.05
HMGB1P13-201ENST00000406019 DLEC1Q9Y238 1755 aa2.21□□□□□ -2.06
HMGB1P13-201ENST00000406019 IGKV3-7A0A075B6H7 116 aa2.21□□□□□ -2.06
HMGB1P13-201ENST00000406019 SMIM27A0A1W2PRY6 76 aa2.21□□□□□ -2.06
HMGB1P13-201ENST00000406019 J3QRE1 110 aa2.21□□□□□ -2.06
HMGB1P13-201ENST00000406019 ERHP84090 104 aaKnown RBP2.21□□□□□ -2.06
HMGB1P13-201ENST00000406019 NRAPQ86VF7 1730 aa2.21□□□□□ -2.06
HMGB1P13-201ENST00000406019 TMEM263Q8WUH6 116 aaKnown RBP2.21□□□□□ -2.06
HMGB1P13-201ENST00000406019 ZCCHC13Q8WW36 166 aaKnown RBP2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms