RNA–Protein interactions for RNA: ENST00000405240.5

RTN4-209, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,061 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-209ENST00000405240 LOC100131303A0A0U1RQF7 123 aa2.69□□□□□ -1.98
RTN4-209ENST00000405240 GAGE12JA6NER3 117 aa2.69□□□□□ -1.98
RTN4-209ENST00000405240 HILS1P60008 231 aa2.69□□□□□ -1.98
RTN4-209ENST00000405240 GAGE4Q13068 117 aa2.69□□□□□ -1.98
RTN4-209ENST00000405240 GAGE5Q13069 117 aa2.69□□□□□ -1.98
RTN4-209ENST00000405240 Q1RN00 199 aa2.69□□□□□ -1.98
RTN4-209ENST00000405240 COX7B2Q8TF08 81 aa2.69□□□□□ -1.98
RTN4-209ENST00000405240 ACYP1P07311 99 aa2.69□□□□□ -1.98
RTN4-209ENST00000405240 DGAT2L7PQ6IED9 249 aa2.69□□□□□ -1.98
RTN4-209ENST00000405240 FAM218AQ96MZ4 157 aa2.69□□□□□ -1.98
RTN4-209ENST00000405240 CSPG4Q6UVK1 2322 aa2.69□□□□□ -1.98
RTN4-209ENST00000405240 SORL1Q92673 2214 aa2.69□□□□□ -1.98
RTN4-209ENST00000405240 IGLV4-60A0A075B6I1 120 aa2.68□□□□□ -1.98
RTN4-209ENST00000405240 IBA57-AS1B1ANH7 110 aa2.68□□□□□ -1.98
RTN4-209ENST00000405240 HIST2H2BCQ6DN03 193 aa2.68□□□□□ -1.98
RTN4-209ENST00000405240 LINC00167Q96N53 147 aa2.68□□□□□ -1.98
RTN4-209ENST00000405240 X6R8D5 127 aa2.68□□□□□ -1.98
RTN4-209ENST00000405240 SMIM9A6NGZ8 99 aa2.68□□□□□ -1.98
RTN4-209ENST00000405240 NPC2P61916 151 aa2.68□□□□□ -1.98
RTN4-209ENST00000405240 KHDC1LQ5JSQ8 128 aa2.68□□□□□ -1.98
RTN4-209ENST00000405240 LINC00337Q8N6G1 96 aa2.68□□□□□ -1.98
RTN4-209ENST00000405240 WFDC10AQ9H1F0 79 aa2.68□□□□□ -1.98
RTN4-209ENST00000405240 TRAV13-2A0A0B4J235 113 aa2.68□□□□□ -1.98
RTN4-209ENST00000405240 TRAV13-1A0A0B4J241 112 aa2.68□□□□□ -1.98
RTN4-209ENST00000405240 PRIMA1Q86XR5 153 aa2.68□□□□□ -1.98
RTN4-209ENST00000405240 LINC00482Q8N8I6 264 aa2.68□□□□□ -1.98
RTN4-209ENST00000405240 A0A1W2PRX2 142 aa2.68□□□□□ -1.98
RTN4-209ENST00000405240 GAGE7O76087 117 aa2.68□□□□□ -1.98
RTN4-209ENST00000405240 GAGE12FP0CL80 117 aa2.68□□□□□ -1.98
RTN4-209ENST00000405240 GAGE12GP0CL81 117 aa2.68□□□□□ -1.98
RTN4-209ENST00000405240 GAGE12IP0CL82 117 aa2.68□□□□□ -1.98
RTN4-209ENST00000405240 PLA2G2AP14555 144 aa2.68□□□□□ -1.98
RTN4-209ENST00000405240 NDUFV3P56181 108 aaKnown RBP2.68□□□□□ -1.98
RTN4-209ENST00000405240 IMUPQ9GZP8 106 aa2.68□□□□□ -1.98
RTN4-209ENST00000405240 LINC00959A0A1B0GUT2 108 aa2.67□□□□□ -1.98
RTN4-209ENST00000405240 MEIG1Q5JSS6 88 aa2.67□□□□□ -1.98
RTN4-209ENST00000405240 IGHV4-28A0A0C4DH34 117 aa2.67□□□□□ -1.98
RTN4-209ENST00000405240 UBE2L6O14933 153 aa2.67□□□□□ -1.98
RTN4-209ENST00000405240 CCL18P55774 89 aa2.67□□□□□ -1.98
RTN4-209ENST00000405240 C15orf53Q8NAA6 179 aa2.67□□□□□ -1.98
RTN4-209ENST00000405240 KIAA0087Q14695 138 aa2.67□□□□□ -1.98
RTN4-209ENST00000405240 Q8IZM0 81 aa2.67□□□□□ -1.98
RTN4-209ENST00000405240 SMCR5Q8TEV8 140 aa2.67□□□□□ -1.98
RTN4-209ENST00000405240 SETXQ7Z333 2677 aaKnown RBP2.66□□□□□ -1.98
RTN4-209ENST00000405240 CMYA5Q8N3K9 4069 aa2.66□□□□□ -1.98
RTN4-209ENST00000405240 GAGE2BQ13066 116 aa2.66□□□□□ -1.98
RTN4-209ENST00000405240 GAGE2EQ4V326 116 aa2.66□□□□□ -1.98
RTN4-209ENST00000405240 MIR7-3HGQ8N6C7 128 aa2.66□□□□□ -1.98
RTN4-209ENST00000405240 GAGE2DQ9UEU5 116 aa2.66□□□□□ -1.98
RTN4-209ENST00000405240 ITPR3Q14573 2671 aa2.66□□□□□ -1.98
RTN4-209ENST00000405240 TRGV2A0A075B6R0 118 aa2.66□□□□□ -1.98
RTN4-209ENST00000405240 TRGV4A0A0C4DH28 118 aa2.66□□□□□ -1.98
RTN4-209ENST00000405240 SNCGO76070 127 aa2.66□□□□□ -1.98
RTN4-209ENST00000405240 RPL35AP18077 110 aaKnown RBP2.66□□□□□ -1.98
RTN4-209ENST00000405240 GAGE6Q13070 117 aa2.66□□□□□ -1.98
RTN4-209ENST00000405240 C5orf38Q86SI9 138 aa2.66□□□□□ -1.98
RTN4-209ENST00000405240 C11orf44Q8N8P7 122 aa2.66□□□□□ -1.98
RTN4-209ENST00000405240 SMIM11BQ8TCY0 68 aa2.66□□□□□ -1.98
RTN4-209ENST00000405240 DNAH3Q8TD57 4116 aa2.66□□□□□ -1.98
RTN4-209ENST00000405240 LYRM9A8MSI8 78 aa2.66□□□□□ -1.98
RTN4-209ENST00000405240 H0YGX0 51 aa2.66□□□□□ -1.98
RTN4-209ENST00000405240 WIPF1O43516 503 aa2.66□□□□□ -1.98
RTN4-209ENST00000405240 NDUFC2O95298 119 aa2.66□□□□□ -1.98
RTN4-209ENST00000405240 BAALC-AS2P0C853 105 aa2.66□□□□□ -1.98
RTN4-209ENST00000405240 NANOS2P60321 138 aaKnown RBP2.66□□□□□ -1.98
RTN4-209ENST00000405240 COX17Q14061 63 aa2.66□□□□□ -1.98
RTN4-209ENST00000405240 KRTAP3-3Q9BYR6 98 aa2.66□□□□□ -1.98
RTN4-209ENST00000405240 KRTAP3-2Q9BYR7 98 aa2.66□□□□□ -1.98
RTN4-209ENST00000405240 SND1-IT1Q9HBX3 110 aa2.66□□□□□ -1.98
RTN4-209ENST00000405240 CHD6Q8TD26 2715 aa2.66□□□□□ -1.98
RTN4-209ENST00000405240 USP9YO00507 2555 aaPredicted RBP2.65□□□□□ -1.98
RTN4-209ENST00000405240 MALP21145 153 aa2.65□□□□□ -1.98
RTN4-209ENST00000405240 CXCL5P42830 114 aa2.65□□□□□ -1.98
RTN4-209ENST00000405240 HIST1H4AP62805 103 aaKnown RBP2.65□□□□□ -1.98
RTN4-209ENST00000405240 A0A1B0GX51 115 aa2.65□□□□□ -1.99
RTN4-209ENST00000405240 SS18Q15532 418 aa2.65□□□□□ -1.99
RTN4-209ENST00000405240 ANAPC13Q9BS18 74 aa2.65□□□□□ -1.99
RTN4-209ENST00000405240 TENM4Q6N022 2769 aa2.65□□□□□ -1.99
RTN4-209ENST00000405240 A0A087WYN8 130 aa2.65□□□□□ -1.99
RTN4-209ENST00000405240 LINC00643Q86TS7 51 aa2.65□□□□□ -1.99
RTN4-209ENST00000405240 PRO0255Q9UI72 69 aa2.65□□□□□ -1.99
RTN4-209ENST00000405240 CRPP02741 224 aa2.64□□□□□ -1.99
RTN4-209ENST00000405240 MUC7Q8TAX7 377 aa2.64□□□□□ -1.99
RTN4-209ENST00000405240 A0A0U1RRA0 63 aa2.64□□□□□ -1.99
RTN4-209ENST00000405240 INAFM2P0DMQ5 153 aa2.64□□□□□ -1.99
RTN4-209ENST00000405240 GYPEP15421 78 aa2.64□□□□□ -1.99
RTN4-209ENST00000405240 TTC32Q5I0X7 151 aa2.64□□□□□ -1.99
RTN4-209ENST00000405240 C9orf129Q5T035 196 aaKnown RBP2.64□□□□□ -1.99
RTN4-209ENST00000405240 CD164L2Q6UWJ8 174 aa2.64□□□□□ -1.99
RTN4-209ENST00000405240 SPATA3Q8NHX4 192 aa2.64□□□□□ -1.99
RTN4-209ENST00000405240 CHCHD5Q9BSY4 110 aa2.64□□□□□ -1.99
RTN4-209ENST00000405240 KLK5Q9Y337 293 aaPredicted RBP2.64□□□□□ -1.99
RTN4-209ENST00000405240 SPG11Q96JI7 2443 aa2.64□□□□□ -1.99
RTN4-209ENST00000405240 MAP1AP78559 2803 aaPredicted RBP2.64□□□□□ -1.99
RTN4-209ENST00000405240 DNAH1Q9P2D7 4330 aa2.64□□□□□ -1.99
RTN4-209ENST00000405240 ZNF462Q96JM2 2506 aa2.64□□□□□ -1.99
RTN4-209ENST00000405240 KMT2BQ9UMN6 2715 aaPredicted RBP2.63□□□□□ -1.99
RTN4-209ENST00000405240 ATP5G1P05496 136 aa2.63□□□□□ -1.99
RTN4-209ENST00000405240 Q8NAQ8 132 aa2.63□□□□□ -1.99
RTN4-209ENST00000405240 PRR34Q9NV39 138 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms