RNA–Protein interactions for RNA: ENST00000405010.7

HDAC9-202, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 4,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-202ENST00000405010 IGLV1-40P01703 118 aa5.36□□□□□ -1.55
HDAC9-202ENST00000405010 FAM19A4Q96LR4 140 aa5.36□□□□□ -1.55
HDAC9-202ENST00000405010 LITAFQ99732 161 aa5.36□□□□□ -1.55
HDAC9-202ENST00000405010 NOTCH2Q04721 2471 aa5.36□□□□□ -1.55
HDAC9-202ENST00000405010 PKD1L2Q7Z442 2459 aa5.35□□□□□ -1.55
HDAC9-202ENST00000405010 DEFB121Q5J5C9 76 aa5.35□□□□□ -1.55
HDAC9-202ENST00000405010 SNURFQ9Y675 71 aa5.35□□□□□ -1.55
HDAC9-202ENST00000405010 CELSR3Q9NYQ7 3312 aa5.35□□□□□ -1.55
HDAC9-202ENST00000405010 HIVEP2P31629 2446 aa5.35□□□□□ -1.55
HDAC9-202ENST00000405010 DAD1P61803 113 aa5.35□□□□□ -1.55
HDAC9-202ENST00000405010 RPS28P62857 69 aaKnown RBP5.35□□□□□ -1.55
HDAC9-202ENST00000405010 ABCA2Q9BZC7 2435 aa5.35□□□□□ -1.55
HDAC9-202ENST00000405010 Q6ZSN1 163 aa5.35□□□□□ -1.55
HDAC9-202ENST00000405010 WFDC11Q8NEX6 87 aa5.35□□□□□ -1.55
HDAC9-202ENST00000405010 CDC42SE2Q9NRR3 84 aa5.35□□□□□ -1.55
HDAC9-202ENST00000405010 GYPEP15421 78 aa5.34□□□□□ -1.55
HDAC9-202ENST00000405010 C16orf74Q96GX8 76 aa5.34□□□□□ -1.55
HDAC9-202ENST00000405010 CCKP06307 115 aa5.34□□□□□ -1.55
HDAC9-202ENST00000405010 CDSNQ15517 529 aa5.34□□□□□ -1.55
HDAC9-202ENST00000405010 C6orf99Q4VX62 202 aa5.34□□□□□ -1.55
HDAC9-202ENST00000405010 KIR2DL5BQ8NHK3 375 aa5.34□□□□□ -1.55
HDAC9-202ENST00000405010 PRORYQ9H606 182 aa5.34□□□□□ -1.55
HDAC9-202ENST00000405010 A0A0U1RQV1 116 aa5.34□□□□□ -1.55
HDAC9-202ENST00000405010 EIF4EBP3O60516 100 aaPredicted RBP5.34□□□□□ -1.55
HDAC9-202ENST00000405010 SCXQ7RTU7 201 aa5.34□□□□□ -1.55
HDAC9-202ENST00000405010 SMCR5Q8TEV8 140 aa5.34□□□□□ -1.55
HDAC9-202ENST00000405010 PDE6GP18545 87 aa5.34□□□□□ -1.56
HDAC9-202ENST00000405010 LINC00337Q8N6G1 96 aa5.34□□□□□ -1.56
HDAC9-202ENST00000405010 DPH3Q96FX2 82 aa5.34□□□□□ -1.56
HDAC9-202ENST00000405010 FRYQ5TBA9 3013 aa5.33□□□□□ -1.56
HDAC9-202ENST00000405010 JMJD1CQ15652 2540 aa5.33□□□□□ -1.56
HDAC9-202ENST00000405010 J3QLI3 93 aa5.33□□□□□ -1.56
HDAC9-202ENST00000405010 SOSTDC1Q6X4U4 206 aa5.33□□□□□ -1.56
HDAC9-202ENST00000405010 FAM218AQ96MZ4 157 aa5.33□□□□□ -1.56
HDAC9-202ENST00000405010 FAM19A1Q7Z5A9 133 aa5.33□□□□□ -1.56
HDAC9-202ENST00000405010 MPLKIPQ8TAP9 179 aa5.33□□□□□ -1.56
HDAC9-202ENST00000405010 IGLV5-39A0A0G2JS06 123 aa5.32□□□□□ -1.56
HDAC9-202ENST00000405010 HILS1P60008 231 aa5.32□□□□□ -1.56
HDAC9-202ENST00000405010 Q9UF83 564 aa5.32□□□□□ -1.56
HDAC9-202ENST00000405010 SPEGQ15772 3267 aa5.32□□□□□ -1.56
HDAC9-202ENST00000405010 NDUFC2-KCTD14E9PQ53 114 aa5.32□□□□□ -1.56
HDAC9-202ENST00000405010 EYSQ5T1H1 3165 aa5.32□□□□□ -1.56
HDAC9-202ENST00000405010 SMIM26A0A096LP01 95 aa5.32□□□□□ -1.56
HDAC9-202ENST00000405010 ZNF561-AS1K7EIQ3 104 aa5.32□□□□□ -1.56
HDAC9-202ENST00000405010 NREPQ16612 68 aa5.32□□□□□ -1.56
HDAC9-202ENST00000405010 ABCA12Q86UK0 2595 aa5.31□□□□□ -1.56
HDAC9-202ENST00000405010 COL27A1Q8IZC6 1860 aaPredicted RBP5.31□□□□□ -1.56
HDAC9-202ENST00000405010 CCL24O00175 119 aa5.31□□□□□ -1.56
HDAC9-202ENST00000405010 C4orf26Q17RF5 130 aa5.31□□□□□ -1.56
HDAC9-202ENST00000405010 SERP1Q9Y6X1 66 aa5.31□□□□□ -1.56
HDAC9-202ENST00000405010 REV3LO60673 3130 aa5.31□□□□□ -1.56
HDAC9-202ENST00000405010 TRAV7A0A075B6U4 112 aa5.31□□□□□ -1.56
HDAC9-202ENST00000405010 TRBV6-4A0A1B0GX49 114 aa5.31□□□□□ -1.56
HDAC9-202ENST00000405010 TRBV6-8A0A0A6YYG3 113 aa5.31□□□□□ -1.56
HDAC9-202ENST00000405010 F8WEM9 126 aa5.31□□□□□ -1.56
HDAC9-202ENST00000405010 DEFB114Q30KQ6 69 aa5.31□□□□□ -1.56
HDAC9-202ENST00000405010 FRYLO94915 3013 aa5.31□□□□□ -1.56
HDAC9-202ENST00000405010 LOC100131303A0A0U1RQF7 123 aa5.31□□□□□ -1.56
HDAC9-202ENST00000405010 DIRC1Q969H9 104 aa5.31□□□□□ -1.56
HDAC9-202ENST00000405010 FREM2Q5SZK8 3169 aa5.3□□□□□ -1.56
HDAC9-202ENST00000405010 WDFY4Q6ZS81 3184 aa5.3□□□□□ -1.56
HDAC9-202ENST00000405010 H3BQ85 93 aa5.3□□□□□ -1.56
HDAC9-202ENST00000405010 SPAG11BQ08648 103 aa5.3□□□□□ -1.56
HDAC9-202ENST00000405010 A0A1W2PPR1 153 aa5.3□□□□□ -1.56
HDAC9-202ENST00000405010 BRI3O95415 125 aa5.3□□□□□ -1.56
HDAC9-202ENST00000405010 IGLV5-45A0A087WSX0 123 aa5.3□□□□□ -1.56
HDAC9-202ENST00000405010 NDUFC1O43677 76 aa5.3□□□□□ -1.56
HDAC9-202ENST00000405010 CHD8Q9HCK8 2581 aa5.29□□□□□ -1.56
HDAC9-202ENST00000405010 Q6ZQY7 126 aa5.29□□□□□ -1.56
HDAC9-202ENST00000405010 LINC00269Q8N2A0 174 aa5.29□□□□□ -1.56
HDAC9-202ENST00000405010 DEFB105AQ8NG35 78 aa5.29□□□□□ -1.56
HDAC9-202ENST00000405010 Q8N814 137 aa5.29□□□□□ -1.56
HDAC9-202ENST00000405010 ESM1Q9NQ30 184 aa5.29□□□□□ -1.56
HDAC9-202ENST00000405010 IGHV4-28A0A0C4DH34 117 aa5.28□□□□□ -1.56
HDAC9-202ENST00000405010 NTM-AS1Q6ZSK4 140 aa5.28□□□□□ -1.56
HDAC9-202ENST00000405010 LINC00959A0A1B0GUT2 108 aa5.28□□□□□ -1.56
HDAC9-202ENST00000405010 FUSP35637 526 aaKnown RBP eCLIP5.28□□□□□ -1.56
HDAC9-202ENST00000405010 PRR3P79522 188 aaKnown RBP5.28□□□□□ -1.56
HDAC9-202ENST00000405010 KLK9Q2XQG4 91 aa5.28□□□□□ -1.56
HDAC9-202ENST00000405010 C4orf3Q8WVX3 66 aa5.28□□□□□ -1.56
HDAC9-202ENST00000405010 C19orf84I3L1E1 186 aa5.28□□□□□ -1.56
HDAC9-202ENST00000405010 PRB2P02812 416 aaPredicted RBP5.28□□□□□ -1.56
HDAC9-202ENST00000405010 BEAN1Q3B7T3 259 aa5.28□□□□□ -1.56
HDAC9-202ENST00000405010 SPTBN4Q9H254 2564 aa5.28□□□□□ -1.56
HDAC9-202ENST00000405010 HIGD2BQ4VC39 106 aa5.28□□□□□ -1.56
HDAC9-202ENST00000405010 C18orf65Q6ZTR6 163 aa5.28□□□□□ -1.56
HDAC9-202ENST00000405010 POLQO75417 2590 aa5.27□□□□□ -1.57
HDAC9-202ENST00000405010 ATP5EP56381 51 aaPredicted RBP5.27□□□□□ -1.57
HDAC9-202ENST00000405010 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.27□□□□□ -1.57
HDAC9-202ENST00000405010 NKAPP1Q8N9T2 125 aa5.27□□□□□ -1.57
HDAC9-202ENST00000405010 V9GYY9 64 aa5.27□□□□□ -1.57
HDAC9-202ENST00000405010 IGLV4-60A0A075B6I1 120 aa5.27□□□□□ -1.57
HDAC9-202ENST00000405010 A0A087WZ39 114 aa5.27□□□□□ -1.57
HDAC9-202ENST00000405010 BPY2O14599 106 aa5.27□□□□□ -1.57
HDAC9-202ENST00000405010 COX7BP24311 80 aa5.27□□□□□ -1.57
HDAC9-202ENST00000405010 CHCHD10Q8WYQ3 142 aaPredicted RBP5.27□□□□□ -1.57
HDAC9-202ENST00000405010 LINC01600Q96MT4 127 aa5.27□□□□□ -1.57
HDAC9-202ENST00000405010 MIFP14174 115 aa5.26□□□□□ -1.57
HDAC9-202ENST00000405010 PRO0255Q9UI72 69 aa5.26□□□□□ -1.57
HDAC9-202ENST00000405010 AVPP01185 164 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms