RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 Q9HAA7 133 aa8.55□□□□□ -1.04
RBM39-206ENST00000403542 HERVK_113P63121 156 aa8.54□□□□□ -1.04
RBM39-206ENST00000403542 GAGE6Q13070 117 aa8.54□□□□□ -1.04
RBM39-206ENST00000403542 BEAN1Q3B7T3 259 aa8.54□□□□□ -1.04
RBM39-206ENST00000403542 RNF152Q8N8N0 203 aa8.54□□□□□ -1.04
RBM39-206ENST00000403542 EDA2RQ9HAV5 297 aa8.54□□□□□ -1.04
RBM39-206ENST00000403542 K7EQD1 137 aa8.54□□□□□ -1.04
RBM39-206ENST00000403542 UBE2L6O14933 153 aa8.54□□□□□ -1.04
RBM39-206ENST00000403542 FSHBP01225 129 aa8.53□□□□□ -1.04
RBM39-206ENST00000403542 IFITM1P13164 125 aa8.53□□□□□ -1.04
RBM39-206ENST00000403542 DNAJC30Q96LL9 226 aa8.53□□□□□ -1.04
RBM39-206ENST00000403542 TIRAPP58753 221 aa8.52□□□□□ -1.04
RBM39-206ENST00000403542 FAM218AQ96MZ4 157 aa8.52□□□□□ -1.04
RBM39-206ENST00000403542 A8MTW9 85 aa8.52□□□□□ -1.05
RBM39-206ENST00000403542 CHCHD5Q9BSY4 110 aa8.52□□□□□ -1.05
RBM39-206ENST00000403542 HELZ2Q9BYK8 2649 aaKnown RBP8.52□□□□□ -1.05
RBM39-206ENST00000403542 H3BT86 120 aa8.51□□□□□ -1.05
RBM39-206ENST00000403542 CCL24O00175 119 aa8.51□□□□□ -1.05
RBM39-206ENST00000403542 CDC42SE2Q9NRR3 84 aa8.51□□□□□ -1.05
RBM39-206ENST00000403542 FASNP49327 2511 aaKnown RBP8.51□□□□□ -1.05
RBM39-206ENST00000403542 IGLV5-39A0A0G2JS06 123 aa8.51□□□□□ -1.05
RBM39-206ENST00000403542 PFN2P35080 140 aa8.51□□□□□ -1.05
RBM39-206ENST00000403542 IGLV5-45A0A087WSX0 123 aa8.51□□□□□ -1.05
RBM39-206ENST00000403542 WFDC11Q8NEX6 87 aa8.51□□□□□ -1.05
RBM39-206ENST00000403542 HECTD1Q9ULT8 2610 aa8.5□□□□□ -1.05
RBM39-206ENST00000403542 A0A096LPF7 62 aa8.5□□□□□ -1.05
RBM39-206ENST00000403542 M0QXV9 152 aa8.5□□□□□ -1.05
RBM39-206ENST00000403542 DAZ2Q13117 558 aaKnown RBP8.5□□□□□ -1.05
RBM39-206ENST00000403542 CLPSL2Q6UWE3 100 aa8.5□□□□□ -1.05
RBM39-206ENST00000403542 DAZ4Q86SG3 579 aaKnown RBP8.5□□□□□ -1.05
RBM39-206ENST00000403542 C5orf38Q86SI9 138 aa8.5□□□□□ -1.05
RBM39-206ENST00000403542 MIR7-3HGQ8N6C7 128 aa8.5□□□□□ -1.05
RBM39-206ENST00000403542 ESM1Q9NQ30 184 aa8.5□□□□□ -1.05
RBM39-206ENST00000403542 DAZ3Q9NR90 486 aaKnown RBP8.5□□□□□ -1.05
RBM39-206ENST00000403542 IGLV4-60A0A075B6I1 120 aa8.49□□□□□ -1.05
RBM39-206ENST00000403542 DNAJC9-AS1A6NH13 148 aa8.49□□□□□ -1.05
RBM39-206ENST00000403542 DEFB113Q30KQ7 82 aa8.49□□□□□ -1.05
RBM39-206ENST00000403542 TRGV4A0A0C4DH28 118 aa8.49□□□□□ -1.05
RBM39-206ENST00000403542 F5H768 121 aa8.49□□□□□ -1.05
RBM39-206ENST00000403542 DEFB130BP0DP73 79 aa8.49□□□□□ -1.05
RBM39-206ENST00000403542 DEFB130AP0DP74 79 aa8.49□□□□□ -1.05
RBM39-206ENST00000403542 LINC00158P58513 81 aa8.49□□□□□ -1.05
RBM39-206ENST00000403542 COX7A2LO14548 114 aa8.48□□□□□ -1.05
RBM39-206ENST00000403542 TIMM17BO60830 172 aa8.48□□□□□ -1.05
RBM39-206ENST00000403542 BAALC-AS2P0C853 105 aa8.48□□□□□ -1.05
RBM39-206ENST00000403542 TMEM243Q9BU79 118 aa8.48□□□□□ -1.05
RBM39-206ENST00000403542 TENM1Q9UKZ4 2725 aa8.48□□□□□ -1.05
RBM39-206ENST00000403542 ATP5G1P05496 136 aa8.47□□□□□ -1.05
RBM39-206ENST00000403542 GIG44P09565 113 aaPredicted RBP8.47□□□□□ -1.05
RBM39-206ENST00000403542 LINC00337Q8N6G1 96 aa8.47□□□□□ -1.05
RBM39-206ENST00000403542 SMCR5Q8TEV8 140 aa8.47□□□□□ -1.05
RBM39-206ENST00000403542 GAGE2AQ6NT46 116 aa8.46□□□□□ -1.06
RBM39-206ENST00000403542 OR13C6PQ8NH95 151 aa8.45□□□□□ -1.06
RBM39-206ENST00000403542 SND1-IT1Q9HBX3 110 aa8.45□□□□□ -1.06
RBM39-206ENST00000403542 FAM236AA0A1B0GUQ0 79 aa8.45□□□□□ -1.06
RBM39-206ENST00000403542 FAM236BA0A1B0GV22 79 aa8.45□□□□□ -1.06
RBM39-206ENST00000403542 C9orf129Q5T035 196 aaKnown RBP8.45□□□□□ -1.06
RBM39-206ENST00000403542 SHISA2Q6UWI4 295 aa8.45□□□□□ -1.06
RBM39-206ENST00000403542 ATRQ13535 2644 aa8.45□□□□□ -1.06
RBM39-206ENST00000403542 CRPP02741 224 aa8.44□□□□□ -1.06
RBM39-206ENST00000403542 COX7B2Q8TF08 81 aa8.44□□□□□ -1.06
RBM39-206ENST00000403542 UNC79Q9P2D8 2635 aa8.44□□□□□ -1.06
RBM39-206ENST00000403542 TRBV10-1A0A0K0K1A3 114 aa8.44□□□□□ -1.06
RBM39-206ENST00000403542 SLPIP03973 132 aa8.44□□□□□ -1.06
RBM39-206ENST00000403542 IL17DQ8TAD2 202 aa8.44□□□□□ -1.06
RBM39-206ENST00000403542 A0A087WYN8 130 aa8.43□□□□□ -1.06
RBM39-206ENST00000403542 PLAC8L1A1L4L8 177 aa8.43□□□□□ -1.06
RBM39-206ENST00000403542 XCL1P47992 114 aa8.43□□□□□ -1.06
RBM39-206ENST00000403542 IGKV2-28A0A075B6P5 120 aa8.43□□□□□ -1.06
RBM39-206ENST00000403542 IGKV2D-28P01615 120 aa8.43□□□□□ -1.06
RBM39-206ENST00000403542 PAX4O43316 350 aa8.43□□□□□ -1.06
RBM39-206ENST00000403542 TRRAPQ9Y4A5 3859 aa8.42□□□□□ -1.06
RBM39-206ENST00000403542 TEP1Q99973 2627 aaKnown RBP8.42□□□□□ -1.06
RBM39-206ENST00000403542 PRR3P79522 188 aaKnown RBP8.42□□□□□ -1.06
RBM39-206ENST00000403542 SMIM11BQ8TCY0 68 aa8.42□□□□□ -1.06
RBM39-206ENST00000403542 C22orf24Q9Y442 160 aa8.42□□□□□ -1.06
RBM39-206ENST00000403542 DEFB4AO15263 64 aa8.41□□□□□ -1.06
RBM39-206ENST00000403542 KRTAP1-3Q8IUG1 177 aa8.41□□□□□ -1.06
RBM39-206ENST00000403542 CSDC2Q9Y534 153 aaKnown RBP8.41□□□□□ -1.06
RBM39-206ENST00000403542 PDZD2O15018 2839 aa8.41□□□□□ -1.06
RBM39-206ENST00000403542 CCL18P55774 89 aa8.41□□□□□ -1.06
RBM39-206ENST00000403542 C14orf132Q9NPU4 83 aa8.41□□□□□ -1.06
RBM39-206ENST00000403542 ZNF843Q8N446 348 aa8.4□□□□□ -1.06
RBM39-206ENST00000403542 LINC01006Q8NI28 216 aa8.4□□□□□ -1.06
RBM39-206ENST00000403542 DNAL4O96015 105 aa8.4□□□□□ -1.06
RBM39-206ENST00000403542 HERV-K104P63124 156 aa8.4□□□□□ -1.06
RBM39-206ENST00000403542 LINC01600Q96MT4 127 aa8.4□□□□□ -1.06
RBM39-206ENST00000403542 TRBV6-8A0A0A6YYG3 113 aa8.4□□□□□ -1.07
RBM39-206ENST00000403542 SMIM20Q8N5G0 67 aa8.4□□□□□ -1.07
RBM39-206ENST00000403542 IGLV10-54A0A075B6I4 117 aa8.39□□□□□ -1.07
RBM39-206ENST00000403542 LECT2O14960 151 aa8.39□□□□□ -1.07
RBM39-206ENST00000403542 C6orf226Q5I0X4 101 aa8.39□□□□□ -1.07
RBM39-206ENST00000403542 Q8N3U1 123 aa8.39□□□□□ -1.07
RBM39-206ENST00000403542 C16orf74Q96GX8 76 aa8.39□□□□□ -1.07
RBM39-206ENST00000403542 ANK3Q12955 4377 aaKnown RBP8.39□□□□□ -1.07
RBM39-206ENST00000403542 OTOGQ6ZRI0 2925 aa8.39□□□□□ -1.07
RBM39-206ENST00000403542 DEFB121Q5J5C9 76 aa8.39□□□□□ -1.07
RBM39-206ENST00000403542 Q6Q795 121 aa8.39□□□□□ -1.07
RBM39-206ENST00000403542 COPS9Q8WXC6 57 aa8.39□□□□□ -1.07
RBM39-206ENST00000403542 TRAV25A0A0B4J276 109 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms