RNA–Protein interactions for RNA: ENST00000402667.1

DNMT3A-205, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene DNMT3A, Length 2,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-205ENST00000402667 NPC2P61916 151 aa11.94□□□□□ -0.5
DNMT3A-205ENST00000402667 INSL3P51460 131 aa11.94□□□□□ -0.5
DNMT3A-205ENST00000402667 KIR2DL5BQ8NHK3 375 aa11.94□□□□□ -0.5
DNMT3A-205ENST00000402667 Q9H8V8 135 aa11.93□□□□□ -0.5
DNMT3A-205ENST00000402667 F5H768 121 aa11.93□□□□□ -0.5
DNMT3A-205ENST00000402667 TRBV6-8A0A0A6YYG3 113 aa11.92□□□□□ -0.5
DNMT3A-205ENST00000402667 GAGE6Q13070 117 aa11.92□□□□□ -0.5
DNMT3A-205ENST00000402667 Q1RN00 199 aa11.92□□□□□ -0.5
DNMT3A-205ENST00000402667 LINC00612Q8N6U2 182 aa11.92□□□□□ -0.5
DNMT3A-205ENST00000402667 DAND5Q8N907 189 aa11.92□□□□□ -0.5
DNMT3A-205ENST00000402667 X6R8D5 127 aa11.92□□□□□ -0.5
DNMT3A-205ENST00000402667 NSD1Q96L73 2696 aaPredicted RBP11.92□□□□□ -0.5
DNMT3A-205ENST00000402667 VWFP04275 2813 aa11.92□□□□□ -0.5
DNMT3A-205ENST00000402667 C9orf66Q5T8R8 295 aa11.92□□□□□ -0.5
DNMT3A-205ENST00000402667 IFITM1P13164 125 aa11.91□□□□□ -0.5
DNMT3A-205ENST00000402667 CIRBPQ14011 172 aaKnown RBP11.91□□□□□ -0.5
DNMT3A-205ENST00000402667 RNF183Q96D59 192 aa11.91□□□□□ -0.5
DNMT3A-205ENST00000402667 GAGE12HA6NDE8 117 aa11.91□□□□□ -0.5
DNMT3A-205ENST00000402667 ZNF625Q96I27 306 aaPredicted RBP11.91□□□□□ -0.5
DNMT3A-205ENST00000402667 IGLV4-60A0A075B6I1 120 aa11.89□□□□□ -0.51
DNMT3A-205ENST00000402667 ATP6V0E2Q8NHE4 81 aa11.89□□□□□ -0.51
DNMT3A-205ENST00000402667 TRBV30A0A0K0K1B3 111 aa11.88□□□□□ -0.51
DNMT3A-205ENST00000402667 SMIM9A6NGZ8 99 aa11.88□□□□□ -0.51
DNMT3A-205ENST00000402667 CHCHD5Q9BSY4 110 aa11.88□□□□□ -0.51
DNMT3A-205ENST00000402667 SIGMAR1Q99720 223 aa11.88□□□□□ -0.51
DNMT3A-205ENST00000402667 TRIAP1O43715 76 aa11.87□□□□□ -0.51
DNMT3A-205ENST00000402667 FOXI1Q12951 378 aa11.87□□□□□ -0.51
DNMT3A-205ENST00000402667 PRIMA1Q86XR5 153 aa11.87□□□□□ -0.51
DNMT3A-205ENST00000402667 SPATA25Q9BR10 227 aa11.87□□□□□ -0.51
DNMT3A-205ENST00000402667 A0A0U1RRA0 63 aa11.87□□□□□ -0.51
DNMT3A-205ENST00000402667 LINC00308Q8TCZ7 52 aa11.87□□□□□ -0.51
DNMT3A-205ENST00000402667 IGKV3OR2-268A0A0C4DH90 116 aa11.86□□□□□ -0.51
DNMT3A-205ENST00000402667 GYPEP15421 78 aa11.86□□□□□ -0.51
DNMT3A-205ENST00000402667 NBEAL2Q6ZNJ1 2754 aa11.86□□□□□ -0.51
DNMT3A-205ENST00000402667 ICOSQ9Y6W8 199 aa11.86□□□□□ -0.51
DNMT3A-205ENST00000402667 TENM1Q9UKZ4 2725 aa11.85□□□□□ -0.51
DNMT3A-205ENST00000402667 C9JAW5 83 aa11.85□□□□□ -0.51
DNMT3A-205ENST00000402667 TEN1Q86WV5 123 aa11.85□□□□□ -0.51
DNMT3A-205ENST00000402667 HIVEP1P15822 2718 aa11.84□□□□□ -0.51
DNMT3A-205ENST00000402667 HERV-K104P63124 156 aa11.84□□□□□ -0.51
DNMT3A-205ENST00000402667 ATXN8Q156A1 80 aa11.84□□□□□ -0.51
DNMT3A-205ENST00000402667 MEIG1Q5JSS6 88 aa11.84□□□□□ -0.51
DNMT3A-205ENST00000402667 FAM222AQ5U5X8 452 aa11.84□□□□□ -0.51
DNMT3A-205ENST00000402667 CITED1Q99966 193 aa11.84□□□□□ -0.51
DNMT3A-205ENST00000402667 SLC25A20O43772 301 aa11.83□□□□□ -0.51
DNMT3A-205ENST00000402667 DEFB135Q30KP9 77 aa11.83□□□□□ -0.52
DNMT3A-205ENST00000402667 PRO0255Q9UI72 69 aa11.83□□□□□ -0.52
DNMT3A-205ENST00000402667 RPL13AP40429 203 aaKnown RBP11.82□□□□□ -0.52
DNMT3A-205ENST00000402667 SOSTDC1Q6X4U4 206 aa11.82□□□□□ -0.52
DNMT3A-205ENST00000402667 CARD19Q96LW7 228 aa11.82□□□□□ -0.52
DNMT3A-205ENST00000402667 IGHV3OR16-9A0A0B4J2B5 98 aa11.82□□□□□ -0.52
DNMT3A-205ENST00000402667 LYRM9A8MSI8 78 aa11.81□□□□□ -0.52
DNMT3A-205ENST00000402667 COX7B2Q8TF08 81 aa11.81□□□□□ -0.52
DNMT3A-205ENST00000402667 PPDPFLQ8WWR9 84 aa11.81□□□□□ -0.52
DNMT3A-205ENST00000402667 DEFB4AO15263 64 aa11.81□□□□□ -0.52
DNMT3A-205ENST00000402667 LINC01620Q4KN68 170 aa11.81□□□□□ -0.52
DNMT3A-205ENST00000402667 ANKRD29Q8N6D5 301 aa11.81□□□□□ -0.52
DNMT3A-205ENST00000402667 COX6CP09669 75 aa11.8□□□□□ -0.52
DNMT3A-205ENST00000402667 APOC4P55056 127 aa11.8□□□□□ -0.52
DNMT3A-205ENST00000402667 COPS9Q8WXC6 57 aa11.8□□□□□ -0.52
DNMT3A-205ENST00000402667 ATRQ13535 2644 aa11.8□□□□□ -0.52
DNMT3A-205ENST00000402667 M0QXV9 152 aa11.8□□□□□ -0.52
DNMT3A-205ENST00000402667 TOMM7Q9P0U1 55 aa11.79□□□□□ -0.52
DNMT3A-205ENST00000402667 A0A096LPF7 62 aa11.78□□□□□ -0.52
DNMT3A-205ENST00000402667 LINC00959A0A1B0GUT2 108 aa11.78□□□□□ -0.52
DNMT3A-205ENST00000402667 TMEM262E9PQX1 116 aa11.78□□□□□ -0.52
DNMT3A-205ENST00000402667 PAX4O43316 350 aa11.78□□□□□ -0.52
DNMT3A-205ENST00000402667 A0A087WZ39 114 aa11.78□□□□□ -0.52
DNMT3A-205ENST00000402667 IGHV4-28A0A0C4DH34 117 aa11.77□□□□□ -0.52
DNMT3A-205ENST00000402667 SCGB1A1P11684 91 aa11.77□□□□□ -0.52
DNMT3A-205ENST00000402667 A0A1B0GUV1 79 aa11.77□□□□□ -0.53
DNMT3A-205ENST00000402667 C5orf38Q86SI9 138 aa11.77□□□□□ -0.53
DNMT3A-205ENST00000402667 TEP1Q99973 2627 aaKnown RBP11.77□□□□□ -0.53
DNMT3A-205ENST00000402667 MAST4O15021 2626 aa11.77□□□□□ -0.53
DNMT3A-205ENST00000402667 CLEC2BQ92478 149 aa11.76□□□□□ -0.53
DNMT3A-205ENST00000402667 CDIP1Q9H305 208 aa11.76□□□□□ -0.53
DNMT3A-205ENST00000402667 WFDC9Q8NEX5 89 aa11.76□□□□□ -0.53
DNMT3A-205ENST00000402667 TRBV10-2A0A0K0K1G8 114 aa11.75□□□□□ -0.53
DNMT3A-205ENST00000402667 LINC01600Q96MT4 127 aa11.75□□□□□ -0.53
DNMT3A-205ENST00000402667 PPDPFQ9H3Y8 114 aa11.75□□□□□ -0.53
DNMT3A-205ENST00000402667 TRRAPQ9Y4A5 3859 aa11.74□□□□□ -0.53
DNMT3A-205ENST00000402667 LST1O00453 97 aa11.74□□□□□ -0.53
DNMT3A-205ENST00000402667 DAD1P61803 113 aa11.74□□□□□ -0.53
DNMT3A-205ENST00000402667 Q8NAQ8 132 aa11.74□□□□□ -0.53
DNMT3A-205ENST00000402667 MIR7-3HGQ8N6C7 128 aa11.73□□□□□ -0.53
DNMT3A-205ENST00000402667 SS18Q15532 418 aa11.72□□□□□ -0.53
DNMT3A-205ENST00000402667 CELA1Q9UNI1 258 aa11.72□□□□□ -0.53
DNMT3A-205ENST00000402667 MIFP14174 115 aa11.72□□□□□ -0.53
DNMT3A-205ENST00000402667 XCL1P47992 114 aa11.72□□□□□ -0.53
DNMT3A-205ENST00000402667 SHISA2Q6UWI4 295 aa11.72□□□□□ -0.53
DNMT3A-205ENST00000402667 NTN5Q8WTR8 489 aaPredicted RBP11.72□□□□□ -0.53
DNMT3A-205ENST00000402667 CLPSL2Q6UWE3 100 aa11.71□□□□□ -0.53
DNMT3A-205ENST00000402667 WIPF1O43516 503 aa11.71□□□□□ -0.54
DNMT3A-205ENST00000402667 IGHV4-30-4P0DP06 118 aa11.7□□□□□ -0.54
DNMT3A-205ENST00000402667 LINC00158P58513 81 aa11.7□□□□□ -0.54
DNMT3A-205ENST00000402667 ATP5G1P05496 136 aa11.7□□□□□ -0.54
DNMT3A-205ENST00000402667 C2orf82Q6UX34 121 aa11.7□□□□□ -0.54
DNMT3A-205ENST00000402667 TRAV26-1A0A087WT03 109 aa11.69□□□□□ -0.54
DNMT3A-205ENST00000402667 IBA57-AS1B1ANH7 110 aa11.69□□□□□ -0.54
DNMT3A-205ENST00000402667 MT-ATP8P03928 68 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms